Experiment: m-Inositol (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CCNA_02387 and CCNA_02388 are separated by 42 nucleotides CCNA_02388 and CCNA_02389 overlap by 4 nucleotides
CCNA_02387: CCNA_02387 - glutathione reductase, at 2,530,722 to 2,532,122
_02387
CCNA_02388: CCNA_02388 - ribose 5-phosphate isomerase, at 2,532,165 to 2,532,848
_02388
CCNA_02389: CCNA_02389 - glucosamine-1-phosphate acetyltransferase/UDP-N-acetylglucosamine pyrophosphorylase, at 2,532,845 to 2,534,233
_02389
Position (kb)
2532
2533 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2531.203 kb on + strand, within CCNA_02387 at 2531.211 kb on - strand, within CCNA_02387 at 2531.211 kb on - strand, within CCNA_02387 at 2531.226 kb on - strand, within CCNA_02387 at 2531.254 kb on + strand at 2531.262 kb on - strand, within CCNA_02387 at 2531.275 kb on - strand, within CCNA_02387 at 2531.288 kb on + strand, within CCNA_02387 at 2531.357 kb on - strand, within CCNA_02387 at 2531.359 kb on + strand, within CCNA_02387 at 2531.411 kb on - strand, within CCNA_02387 at 2531.418 kb on + strand, within CCNA_02387 at 2531.418 kb on + strand, within CCNA_02387 at 2531.426 kb on - strand, within CCNA_02387 at 2531.426 kb on - strand, within CCNA_02387 at 2531.426 kb on - strand, within CCNA_02387 at 2531.426 kb on - strand, within CCNA_02387 at 2531.429 kb on + strand, within CCNA_02387 at 2531.437 kb on - strand, within CCNA_02387 at 2531.437 kb on - strand, within CCNA_02387 at 2531.523 kb on + strand, within CCNA_02387 at 2531.550 kb on - strand, within CCNA_02387 at 2531.550 kb on - strand, within CCNA_02387 at 2531.576 kb on - strand, within CCNA_02387 at 2531.596 kb on + strand, within CCNA_02387 at 2531.604 kb on - strand, within CCNA_02387 at 2531.604 kb on - strand, within CCNA_02387 at 2531.604 kb on - strand, within CCNA_02387 at 2531.604 kb on - strand, within CCNA_02387 at 2531.604 kb on - strand at 2531.607 kb on + strand, within CCNA_02387 at 2531.645 kb on + strand, within CCNA_02387 at 2531.706 kb on + strand, within CCNA_02387 at 2531.708 kb on + strand, within CCNA_02387 at 2531.710 kb on + strand, within CCNA_02387 at 2531.710 kb on + strand, within CCNA_02387 at 2531.718 kb on - strand, within CCNA_02387 at 2531.750 kb on - strand, within CCNA_02387 at 2531.758 kb on - strand, within CCNA_02387 at 2531.758 kb on - strand, within CCNA_02387 at 2531.766 kb on - strand, within CCNA_02387 at 2531.790 kb on + strand, within CCNA_02387 at 2531.910 kb on + strand, within CCNA_02387 at 2531.916 kb on + strand, within CCNA_02387 at 2531.918 kb on - strand, within CCNA_02387 at 2531.918 kb on - strand, within CCNA_02387 at 2531.918 kb on - strand, within CCNA_02387 at 2531.919 kb on - strand, within CCNA_02387 at 2531.924 kb on - strand, within CCNA_02387 at 2531.934 kb on - strand, within CCNA_02387 at 2531.934 kb on - strand, within CCNA_02387 at 2531.952 kb on + strand, within CCNA_02387 at 2531.960 kb on - strand, within CCNA_02387 at 2531.960 kb on - strand, within CCNA_02387 at 2531.960 kb on - strand, within CCNA_02387 at 2531.960 kb on - strand, within CCNA_02387 at 2531.960 kb on - strand, within CCNA_02387 at 2531.990 kb on - strand at 2532.007 kb on + strand at 2532.083 kb on - strand at 2532.106 kb on + strand at 2532.109 kb on - strand at 2532.122 kb on + strand at 2532.158 kb on - strand at 2532.171 kb on - strand at 2532.171 kb on - strand at 2532.171 kb on - strand at 2532.191 kb on + strand at 2532.860 kb on - strand at 2532.885 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m-Inositol (C) remove 2,531,203 + CCNA_02387 0.34 +0.5 2,531,211 - CCNA_02387 0.35 -0.2 2,531,211 - CCNA_02387 0.35 +0.7 2,531,226 - CCNA_02387 0.36 -0.7 2,531,254 + +2.7 2,531,262 - CCNA_02387 0.39 +0.9 2,531,275 - CCNA_02387 0.39 +1.0 2,531,288 + CCNA_02387 0.40 -0.4 2,531,357 - CCNA_02387 0.45 +0.8 2,531,359 + CCNA_02387 0.45 +1.1 2,531,411 - CCNA_02387 0.49 +0.9 2,531,418 + CCNA_02387 0.50 -2.6 2,531,418 + CCNA_02387 0.50 -0.3 2,531,426 - CCNA_02387 0.50 +0.1 2,531,426 - CCNA_02387 0.50 +0.2 2,531,426 - CCNA_02387 0.50 +0.7 2,531,426 - CCNA_02387 0.50 +0.2 2,531,429 + CCNA_02387 0.50 -0.9 2,531,437 - CCNA_02387 0.51 -0.4 2,531,437 - CCNA_02387 0.51 +0.1 2,531,523 + CCNA_02387 0.57 +0.1 2,531,550 - CCNA_02387 0.59 -1.0 2,531,550 - CCNA_02387 0.59 -1.5 2,531,576 - CCNA_02387 0.61 +0.3 2,531,596 + CCNA_02387 0.62 +0.3 2,531,604 - CCNA_02387 0.63 -1.7 2,531,604 - CCNA_02387 0.63 +0.7 2,531,604 - CCNA_02387 0.63 -0.3 2,531,604 - CCNA_02387 0.63 -0.2 2,531,604 - +2.1 2,531,607 + CCNA_02387 0.63 +0.9 2,531,645 + CCNA_02387 0.66 +1.3 2,531,706 + CCNA_02387 0.70 -1.3 2,531,708 + CCNA_02387 0.70 +0.2 2,531,710 + CCNA_02387 0.71 +1.7 2,531,710 + CCNA_02387 0.71 -0.4 2,531,718 - CCNA_02387 0.71 +0.2 2,531,750 - CCNA_02387 0.73 +0.0 2,531,758 - CCNA_02387 0.74 +0.2 2,531,758 - CCNA_02387 0.74 +0.3 2,531,766 - CCNA_02387 0.75 +0.8 2,531,790 + CCNA_02387 0.76 +0.6 2,531,910 + CCNA_02387 0.85 -0.0 2,531,916 + CCNA_02387 0.85 -0.8 2,531,918 - CCNA_02387 0.85 -0.3 2,531,918 - CCNA_02387 0.85 +0.4 2,531,918 - CCNA_02387 0.85 +1.1 2,531,919 - CCNA_02387 0.85 -0.4 2,531,924 - CCNA_02387 0.86 +0.4 2,531,934 - CCNA_02387 0.87 +0.6 2,531,934 - CCNA_02387 0.87 +0.5 2,531,952 + CCNA_02387 0.88 -2.3 2,531,960 - CCNA_02387 0.88 +0.5 2,531,960 - CCNA_02387 0.88 +1.2 2,531,960 - CCNA_02387 0.88 +0.3 2,531,960 - CCNA_02387 0.88 -0.3 2,531,960 - CCNA_02387 0.88 +0.5 2,531,990 - +0.1 2,532,007 + -2.0 2,532,083 - +1.4 2,532,106 + -1.7 2,532,109 - -0.4 2,532,122 + -0.4 2,532,158 - +1.6 2,532,171 - +1.2 2,532,171 - +0.8 2,532,171 - +1.1 2,532,191 + -0.3 2,532,860 - +0.2 2,532,885 - +2.1
Or see this region's nucleotide sequence