Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_28610

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_28605 and AO356_28610 are separated by 77 nucleotidesAO356_28610 and AO356_28615 are separated by 99 nucleotides AO356_28605: AO356_28605 - N-ethylmaleimide reductase, at 6,648,684 to 6,649,778 _28605 AO356_28610: AO356_28610 - AraC family transcriptional regulator, at 6,649,856 to 6,650,644 _28610 AO356_28615: AO356_28615 - NADPH:quinone oxidoreductase, at 6,650,744 to 6,651,760 _28615 Position (kb) 6649 6650 6651Strain fitness (log2 ratio) -1 0 1 2at 6648.906 kb on + strand, within AO356_28605at 6648.907 kb on - strand, within AO356_28605at 6648.907 kb on - strand, within AO356_28605at 6649.201 kb on + strand, within AO356_28605at 6649.428 kb on + strand, within AO356_28605at 6649.548 kb on - strand, within AO356_28605at 6649.554 kb on + strand, within AO356_28605at 6649.554 kb on + strand, within AO356_28605at 6649.555 kb on - strand, within AO356_28605at 6649.555 kb on - strand, within AO356_28605at 6649.913 kb on + strandat 6649.914 kb on - strandat 6650.385 kb on - strand, within AO356_28610at 6650.385 kb on - strand, within AO356_28610at 6650.925 kb on + strand, within AO356_28615at 6650.926 kb on - strand, within AO356_28615at 6651.002 kb on + strand, within AO356_28615at 6651.003 kb on - strand, within AO356_28615at 6651.283 kb on - strand, within AO356_28615at 6651.359 kb on + strand, within AO356_28615at 6651.360 kb on - strand, within AO356_28615at 6651.531 kb on + strand, within AO356_28615

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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6,648,906 + AO356_28605 0.20 +0.6
6,648,907 - AO356_28605 0.20 +1.1
6,648,907 - AO356_28605 0.20 -0.2
6,649,201 + AO356_28605 0.47 +0.6
6,649,428 + AO356_28605 0.68 -0.2
6,649,548 - AO356_28605 0.79 +0.4
6,649,554 + AO356_28605 0.79 -0.3
6,649,554 + AO356_28605 0.79 -0.4
6,649,555 - AO356_28605 0.80 +2.3
6,649,555 - AO356_28605 0.80 +0.2
6,649,913 + +0.2
6,649,914 - +1.2
6,650,385 - AO356_28610 0.67 +0.5
6,650,385 - AO356_28610 0.67 +0.9
6,650,925 + AO356_28615 0.18 -1.0
6,650,926 - AO356_28615 0.18 -0.5
6,651,002 + AO356_28615 0.25 +0.9
6,651,003 - AO356_28615 0.25 -0.1
6,651,283 - AO356_28615 0.53 -0.4
6,651,359 + AO356_28615 0.60 +0.5
6,651,360 - AO356_28615 0.61 +1.1
6,651,531 + AO356_28615 0.77 +1.1

Or see this region's nucleotide sequence