Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28465 and AO356_28470 are separated by 183 nucleotides AO356_28470 and AO356_28475 are separated by 152 nucleotides AO356_28475 and AO356_28480 are separated by 30 nucleotides
AO356_28465: AO356_28465 - LysR family transcriptional regulator, at 6,616,891 to 6,617,799
_28465
AO356_28470: AO356_28470 - hypothetical protein, at 6,617,983 to 6,618,324
_28470
AO356_28475: AO356_28475 - hypothetical protein, at 6,618,477 to 6,618,716
_28475
AO356_28480: AO356_28480 - hypothetical protein, at 6,618,747 to 6,619,682
_28480
Position (kb)
6618
6619 Strain fitness (log2 ratio)
-1
0
1 at 6617.634 kb on - strand, within AO356_28465 at 6617.634 kb on - strand, within AO356_28465 at 6617.687 kb on - strand, within AO356_28465 at 6617.697 kb on + strand, within AO356_28465 at 6617.795 kb on + strand at 6617.795 kb on + strand at 6617.796 kb on - strand at 6617.838 kb on - strand at 6618.053 kb on + strand, within AO356_28470 at 6618.054 kb on - strand, within AO356_28470 at 6618.061 kb on + strand, within AO356_28470 at 6618.061 kb on + strand, within AO356_28470 at 6618.061 kb on + strand, within AO356_28470 at 6618.061 kb on + strand, within AO356_28470 at 6618.061 kb on + strand, within AO356_28470 at 6618.062 kb on - strand, within AO356_28470 at 6618.062 kb on - strand, within AO356_28470 at 6618.062 kb on - strand, within AO356_28470 at 6618.086 kb on + strand, within AO356_28470 at 6618.086 kb on + strand, within AO356_28470 at 6618.087 kb on - strand, within AO356_28470 at 6618.087 kb on - strand, within AO356_28470 at 6618.209 kb on + strand, within AO356_28470 at 6618.313 kb on + strand at 6618.426 kb on + strand at 6618.427 kb on - strand at 6618.429 kb on + strand at 6618.435 kb on + strand at 6618.435 kb on + strand at 6618.436 kb on - strand at 6618.436 kb on - strand at 6618.436 kb on - strand at 6618.436 kb on - strand at 6618.442 kb on - strand at 6618.472 kb on + strand at 6618.473 kb on - strand at 6618.540 kb on + strand, within AO356_28475 at 6618.553 kb on - strand, within AO356_28475 at 6618.645 kb on - strand, within AO356_28475 at 6619.083 kb on + strand, within AO356_28480 at 6619.240 kb on + strand, within AO356_28480 at 6619.357 kb on + strand, within AO356_28480 at 6619.357 kb on + strand, within AO356_28480 at 6619.358 kb on - strand, within AO356_28480 at 6619.361 kb on + strand, within AO356_28480 at 6619.361 kb on + strand, within AO356_28480 at 6619.362 kb on - strand, within AO356_28480 at 6619.362 kb on - strand, within AO356_28480 at 6619.362 kb on - strand, within AO356_28480 at 6619.469 kb on - strand, within AO356_28480 at 6619.658 kb on - strand at 6619.658 kb on - strand at 6619.658 kb on - strand at 6619.658 kb on - strand at 6619.666 kb on + strand at 6619.666 kb on + strand at 6619.667 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 6,617,634 - AO356_28465 0.82 -0.1 6,617,634 - AO356_28465 0.82 -0.5 6,617,687 - AO356_28465 0.88 +0.1 6,617,697 + AO356_28465 0.89 +0.3 6,617,795 + +0.0 6,617,795 + +0.2 6,617,796 - +0.1 6,617,838 - -1.2 6,618,053 + AO356_28470 0.20 +0.7 6,618,054 - AO356_28470 0.21 -0.5 6,618,061 + AO356_28470 0.23 +0.8 6,618,061 + AO356_28470 0.23 -0.2 6,618,061 + AO356_28470 0.23 +0.0 6,618,061 + AO356_28470 0.23 -0.1 6,618,061 + AO356_28470 0.23 +0.3 6,618,062 - AO356_28470 0.23 +0.9 6,618,062 - AO356_28470 0.23 +0.0 6,618,062 - AO356_28470 0.23 -0.0 6,618,086 + AO356_28470 0.30 +0.0 6,618,086 + AO356_28470 0.30 +0.1 6,618,087 - AO356_28470 0.30 -0.6 6,618,087 - AO356_28470 0.30 +0.2 6,618,209 + AO356_28470 0.66 +0.8 6,618,313 + +0.4 6,618,426 + -0.4 6,618,427 - +0.0 6,618,429 + +0.1 6,618,435 + +1.2 6,618,435 + +0.2 6,618,436 - -1.0 6,618,436 - -0.8 6,618,436 - -0.7 6,618,436 - +1.5 6,618,442 - -0.1 6,618,472 + +1.4 6,618,473 - +1.0 6,618,540 + AO356_28475 0.26 +0.8 6,618,553 - AO356_28475 0.32 +1.0 6,618,645 - AO356_28475 0.70 +1.6 6,619,083 + AO356_28480 0.36 -0.3 6,619,240 + AO356_28480 0.53 +0.7 6,619,357 + AO356_28480 0.65 -0.7 6,619,357 + AO356_28480 0.65 +0.2 6,619,358 - AO356_28480 0.65 -1.4 6,619,361 + AO356_28480 0.66 +0.2 6,619,361 + AO356_28480 0.66 +0.7 6,619,362 - AO356_28480 0.66 -0.4 6,619,362 - AO356_28480 0.66 -1.1 6,619,362 - AO356_28480 0.66 -0.0 6,619,469 - AO356_28480 0.77 +0.7 6,619,658 - +0.2 6,619,658 - +0.9 6,619,658 - +0.2 6,619,658 - -0.7 6,619,666 + -0.2 6,619,666 + +0.6 6,619,667 - +0.4
Or see this region's nucleotide sequence