Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28325 and AO356_28330 are separated by 2 nucleotides AO356_28330 and AO356_28335 overlap by 8 nucleotides
AO356_28325: AO356_28325 - ABC transporter, at 6,585,863 to 6,587,212
_28325
AO356_28330: AO356_28330 - secretion protein HlyD, at 6,587,215 to 6,588,585
_28330
AO356_28335: AO356_28335 - peptidase, at 6,588,578 to 6,590,299
_28335
Position (kb)
6587
6588
6589 Strain fitness (log2 ratio)
-1
0
1 at 6586.276 kb on - strand, within AO356_28325 at 6586.278 kb on + strand, within AO356_28325 at 6586.278 kb on + strand, within AO356_28325 at 6586.279 kb on - strand, within AO356_28325 at 6586.279 kb on - strand, within AO356_28325 at 6586.279 kb on - strand, within AO356_28325 at 6586.279 kb on - strand, within AO356_28325 at 6586.279 kb on - strand, within AO356_28325 at 6586.672 kb on - strand, within AO356_28325 at 6586.785 kb on + strand, within AO356_28325 at 6586.786 kb on - strand, within AO356_28325 at 6586.786 kb on - strand, within AO356_28325 at 6586.786 kb on - strand, within AO356_28325 at 6586.935 kb on + strand, within AO356_28325 at 6586.935 kb on + strand, within AO356_28325 at 6586.936 kb on - strand, within AO356_28325 at 6586.960 kb on + strand, within AO356_28325 at 6587.100 kb on + strand at 6587.181 kb on - strand at 6587.267 kb on + strand at 6587.393 kb on + strand, within AO356_28330 at 6587.394 kb on - strand, within AO356_28330 at 6587.981 kb on + strand, within AO356_28330 at 6588.554 kb on + strand at 6588.554 kb on + strand at 6588.554 kb on + strand at 6588.555 kb on - strand at 6588.673 kb on + strand at 6588.853 kb on - strand, within AO356_28335 at 6589.290 kb on + strand, within AO356_28335 at 6589.290 kb on + strand, within AO356_28335 at 6589.290 kb on + strand, within AO356_28335 at 6589.290 kb on + strand, within AO356_28335 at 6589.290 kb on + strand, within AO356_28335 at 6589.291 kb on - strand, within AO356_28335 at 6589.291 kb on - strand, within AO356_28335 at 6589.291 kb on - strand, within AO356_28335 at 6589.386 kb on + strand, within AO356_28335
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 6,586,276 - AO356_28325 0.31 +0.6 6,586,278 + AO356_28325 0.31 +0.8 6,586,278 + AO356_28325 0.31 +0.3 6,586,279 - AO356_28325 0.31 +0.9 6,586,279 - AO356_28325 0.31 -0.8 6,586,279 - AO356_28325 0.31 +0.5 6,586,279 - AO356_28325 0.31 -0.5 6,586,279 - AO356_28325 0.31 +0.5 6,586,672 - AO356_28325 0.60 +0.3 6,586,785 + AO356_28325 0.68 -1.0 6,586,786 - AO356_28325 0.68 +0.5 6,586,786 - AO356_28325 0.68 +1.6 6,586,786 - AO356_28325 0.68 -0.1 6,586,935 + AO356_28325 0.79 +0.7 6,586,935 + AO356_28325 0.79 +1.6 6,586,936 - AO356_28325 0.79 -0.7 6,586,960 + AO356_28325 0.81 -0.5 6,587,100 + -1.0 6,587,181 - -0.8 6,587,267 + +0.3 6,587,393 + AO356_28330 0.13 +0.6 6,587,394 - AO356_28330 0.13 +1.1 6,587,981 + AO356_28330 0.56 +0.3 6,588,554 + -0.3 6,588,554 + -0.4 6,588,554 + +0.3 6,588,555 - -0.2 6,588,673 + -0.1 6,588,853 - AO356_28335 0.16 -1.4 6,589,290 + AO356_28335 0.41 +0.4 6,589,290 + AO356_28335 0.41 +0.1 6,589,290 + AO356_28335 0.41 -0.2 6,589,290 + AO356_28335 0.41 +0.2 6,589,290 + AO356_28335 0.41 +0.6 6,589,291 - AO356_28335 0.41 +0.2 6,589,291 - AO356_28335 0.41 +0.6 6,589,291 - AO356_28335 0.41 +0.3 6,589,386 + AO356_28335 0.47 -0.6
Or see this region's nucleotide sequence