Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_28285 and AO356_28290 are separated by 601 nucleotides AO356_28290 and AO356_28295 are separated by 83 nucleotides
AO356_28285: AO356_28285 - 2-polyprenyl-6-methoxyphenol hydroxylase, at 6,571,856 to 6,573,016
_28285
AO356_28290: AO356_28290 - LuxR family transcriptional regulator, at 6,573,618 to 6,574,442
_28290
AO356_28295: AO356_28295 - multidrug transporter, at 6,574,526 to 6,575,950
_28295
Position (kb)
6573
6574
6575 Strain fitness (log2 ratio)
-2
-1
0
1 at 6572.826 kb on + strand, within AO356_28285 at 6572.827 kb on - strand, within AO356_28285 at 6572.834 kb on + strand, within AO356_28285 at 6572.835 kb on - strand, within AO356_28285 at 6572.942 kb on + strand at 6572.943 kb on - strand at 6572.943 kb on - strand at 6572.944 kb on + strand at 6572.944 kb on + strand at 6572.944 kb on + strand at 6572.944 kb on + strand at 6572.945 kb on - strand at 6572.945 kb on - strand at 6572.945 kb on - strand at 6572.945 kb on - strand at 6573.197 kb on + strand at 6573.456 kb on - strand at 6573.459 kb on - strand at 6573.488 kb on + strand at 6573.489 kb on - strand at 6573.489 kb on - strand at 6573.489 kb on - strand at 6573.517 kb on + strand at 6573.517 kb on + strand at 6573.518 kb on - strand at 6573.601 kb on - strand at 6573.601 kb on - strand at 6573.601 kb on - strand at 6573.611 kb on - strand at 6573.617 kb on + strand at 6573.617 kb on + strand at 6573.617 kb on + strand at 6573.663 kb on + strand at 6573.663 kb on + strand at 6573.663 kb on + strand at 6573.663 kb on + strand at 6573.664 kb on - strand at 6573.664 kb on - strand at 6573.664 kb on - strand at 6573.668 kb on - strand at 6573.674 kb on - strand at 6573.812 kb on - strand, within AO356_28290 at 6573.812 kb on - strand, within AO356_28290 at 6573.812 kb on - strand, within AO356_28290 at 6573.880 kb on + strand, within AO356_28290 at 6574.340 kb on - strand, within AO356_28290 at 6574.340 kb on - strand, within AO356_28290 at 6574.368 kb on + strand at 6574.368 kb on + strand at 6574.368 kb on + strand at 6574.368 kb on + strand at 6574.369 kb on - strand at 6574.369 kb on - strand at 6574.369 kb on - strand at 6574.516 kb on + strand at 6574.516 kb on + strand at 6574.516 kb on + strand at 6574.516 kb on + strand at 6574.516 kb on + strand at 6574.517 kb on - strand at 6574.531 kb on + strand at 6574.532 kb on - strand at 6574.596 kb on - strand at 6574.788 kb on - strand, within AO356_28295 at 6574.914 kb on - strand, within AO356_28295 at 6574.940 kb on + strand, within AO356_28295 at 6574.963 kb on + strand, within AO356_28295 at 6574.964 kb on - strand, within AO356_28295 at 6574.964 kb on - strand, within AO356_28295 at 6574.965 kb on + strand, within AO356_28295 at 6574.998 kb on - strand, within AO356_28295 at 6574.998 kb on - strand, within AO356_28295 at 6574.998 kb on - strand, within AO356_28295 at 6575.063 kb on + strand, within AO356_28295 at 6575.064 kb on - strand, within AO356_28295 at 6575.064 kb on - strand, within AO356_28295 at 6575.406 kb on - strand, within AO356_28295
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 6,572,826 + AO356_28285 0.84 -0.7 6,572,827 - AO356_28285 0.84 -0.2 6,572,834 + AO356_28285 0.84 -0.4 6,572,835 - AO356_28285 0.84 +0.9 6,572,942 + +0.3 6,572,943 - +0.5 6,572,943 - +0.9 6,572,944 + +0.2 6,572,944 + -0.8 6,572,944 + -0.3 6,572,944 + -0.3 6,572,945 - +1.6 6,572,945 - +0.1 6,572,945 - -0.7 6,572,945 - +0.2 6,573,197 + +0.1 6,573,456 - +0.6 6,573,459 - +0.1 6,573,488 + +0.3 6,573,489 - -0.5 6,573,489 - -0.5 6,573,489 - +0.7 6,573,517 + +0.0 6,573,517 + +0.6 6,573,518 - +0.3 6,573,601 - +1.2 6,573,601 - +0.4 6,573,601 - -0.2 6,573,611 - +0.4 6,573,617 + -1.2 6,573,617 + -0.3 6,573,617 + +0.5 6,573,663 + +1.1 6,573,663 + -0.1 6,573,663 + +0.1 6,573,663 + +1.1 6,573,664 - -0.0 6,573,664 - +0.5 6,573,664 - -0.2 6,573,668 - -2.1 6,573,674 - +1.3 6,573,812 - AO356_28290 0.24 +0.3 6,573,812 - AO356_28290 0.24 +1.3 6,573,812 - AO356_28290 0.24 -0.8 6,573,880 + AO356_28290 0.32 -0.4 6,574,340 - AO356_28290 0.88 +0.2 6,574,340 - AO356_28290 0.88 +1.3 6,574,368 + +0.1 6,574,368 + +0.1 6,574,368 + +0.4 6,574,368 + +0.1 6,574,369 - -0.4 6,574,369 - -0.4 6,574,369 - +0.9 6,574,516 + -0.2 6,574,516 + -0.4 6,574,516 + +0.6 6,574,516 + -0.0 6,574,516 + +0.6 6,574,517 - -0.0 6,574,531 + +0.5 6,574,532 - +0.2 6,574,596 - +1.0 6,574,788 - AO356_28295 0.18 -0.4 6,574,914 - AO356_28295 0.27 +0.5 6,574,940 + AO356_28295 0.29 +1.0 6,574,963 + AO356_28295 0.31 -0.0 6,574,964 - AO356_28295 0.31 -0.0 6,574,964 - AO356_28295 0.31 +0.5 6,574,965 + AO356_28295 0.31 -0.2 6,574,998 - AO356_28295 0.33 -0.0 6,574,998 - AO356_28295 0.33 +1.5 6,574,998 - AO356_28295 0.33 +0.6 6,575,063 + AO356_28295 0.38 +0.6 6,575,064 - AO356_28295 0.38 -0.1 6,575,064 - AO356_28295 0.38 -1.4 6,575,406 - AO356_28295 0.62 -1.1
Or see this region's nucleotide sequence