Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_27250

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_27240 and AO356_27245 are separated by 11 nucleotidesAO356_27245 and AO356_27250 are separated by 45 nucleotidesAO356_27250 and AO356_27255 are separated by 302 nucleotides AO356_27240: AO356_27240 - hypothetical protein, at 6,209,052 to 6,210,074 _27240 AO356_27245: AO356_27245 - hypothetical protein, at 6,210,086 to 6,210,352 _27245 AO356_27250: AO356_27250 - hypothetical protein, at 6,210,398 to 6,212,098 _27250 AO356_27255: AO356_27255 - transcriptional regulator, at 6,212,401 to 6,213,426 _27255 Position (kb) 6210 6211 6212 6213Strain fitness (log2 ratio) -2 -1 0 1 2 3at 6209.413 kb on - strand, within AO356_27240at 6209.497 kb on + strand, within AO356_27240at 6209.498 kb on - strand, within AO356_27240at 6209.581 kb on + strand, within AO356_27240at 6209.582 kb on - strand, within AO356_27240at 6209.678 kb on + strand, within AO356_27240at 6209.775 kb on + strand, within AO356_27240at 6209.776 kb on - strand, within AO356_27240at 6209.816 kb on + strand, within AO356_27240at 6209.824 kb on - strand, within AO356_27240at 6209.824 kb on - strand, within AO356_27240at 6209.963 kb on + strand, within AO356_27240at 6209.964 kb on - strand, within AO356_27240at 6210.062 kb on + strandat 6210.062 kb on + strandat 6210.063 kb on - strandat 6210.088 kb on - strandat 6210.128 kb on + strand, within AO356_27245at 6210.221 kb on + strand, within AO356_27245at 6210.300 kb on - strand, within AO356_27245at 6210.453 kb on + strandat 6210.453 kb on + strandat 6210.558 kb on - strandat 6210.632 kb on + strand, within AO356_27250at 6210.633 kb on - strand, within AO356_27250at 6210.695 kb on + strand, within AO356_27250at 6210.886 kb on + strand, within AO356_27250at 6210.886 kb on + strand, within AO356_27250at 6210.887 kb on - strand, within AO356_27250at 6210.887 kb on - strand, within AO356_27250at 6210.992 kb on + strand, within AO356_27250at 6210.993 kb on - strand, within AO356_27250at 6210.996 kb on + strand, within AO356_27250at 6210.996 kb on + strand, within AO356_27250at 6210.996 kb on + strand, within AO356_27250at 6211.084 kb on + strand, within AO356_27250at 6211.084 kb on + strand, within AO356_27250at 6211.085 kb on - strand, within AO356_27250at 6211.085 kb on - strand, within AO356_27250at 6211.137 kb on + strand, within AO356_27250at 6211.151 kb on + strand, within AO356_27250at 6211.152 kb on - strand, within AO356_27250at 6211.152 kb on - strand, within AO356_27250at 6211.209 kb on + strand, within AO356_27250at 6211.240 kb on - strand, within AO356_27250at 6211.334 kb on - strand, within AO356_27250at 6211.814 kb on + strand, within AO356_27250at 6211.814 kb on + strand, within AO356_27250at 6211.815 kb on - strand, within AO356_27250at 6211.944 kb on - strandat 6212.093 kb on - strandat 6212.385 kb on - strandat 6212.402 kb on + strandat 6212.529 kb on + strand, within AO356_27255at 6212.534 kb on + strand, within AO356_27255at 6212.534 kb on + strand, within AO356_27255at 6212.535 kb on - strand, within AO356_27255at 6212.535 kb on - strand, within AO356_27255at 6212.535 kb on - strand, within AO356_27255at 6212.535 kb on - strand, within AO356_27255at 6212.568 kb on + strand, within AO356_27255at 6212.569 kb on - strand, within AO356_27255at 6212.569 kb on - strand, within AO356_27255at 6212.569 kb on - strand, within AO356_27255at 6212.622 kb on + strand, within AO356_27255at 6212.622 kb on + strand, within AO356_27255at 6212.622 kb on + strand, within AO356_27255at 6212.623 kb on - strand, within AO356_27255at 6212.626 kb on + strand, within AO356_27255at 6212.626 kb on + strand, within AO356_27255at 6212.666 kb on + strand, within AO356_27255at 6212.667 kb on - strand, within AO356_27255at 6212.667 kb on - strand, within AO356_27255at 6212.667 kb on - strand, within AO356_27255at 6212.667 kb on - strand, within AO356_27255at 6212.667 kb on - strand, within AO356_27255at 6212.929 kb on + strand, within AO356_27255at 6212.930 kb on - strand, within AO356_27255at 6212.934 kb on - strand, within AO356_27255at 6212.983 kb on + strand, within AO356_27255at 6212.985 kb on + strand, within AO356_27255at 6212.986 kb on - strand, within AO356_27255at 6212.986 kb on - strand, within AO356_27255at 6212.989 kb on + strand, within AO356_27255at 6212.989 kb on + strand, within AO356_27255

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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6,209,413 - AO356_27240 0.35 -0.0
6,209,497 + AO356_27240 0.43 +1.5
6,209,498 - AO356_27240 0.44 -1.0
6,209,581 + AO356_27240 0.52 +1.8
6,209,582 - AO356_27240 0.52 +0.9
6,209,678 + AO356_27240 0.61 +1.6
6,209,775 + AO356_27240 0.71 +0.9
6,209,776 - AO356_27240 0.71 -0.8
6,209,816 + AO356_27240 0.75 +0.5
6,209,824 - AO356_27240 0.75 -0.5
6,209,824 - AO356_27240 0.75 +0.6
6,209,963 + AO356_27240 0.89 +1.4
6,209,964 - AO356_27240 0.89 -0.1
6,210,062 + +1.9
6,210,062 + +2.5
6,210,063 - -0.2
6,210,088 - -2.6
6,210,128 + AO356_27245 0.16 +1.9
6,210,221 + AO356_27245 0.51 +0.3
6,210,300 - AO356_27245 0.80 -0.6
6,210,453 + +1.2
6,210,453 + +1.2
6,210,558 - -0.2
6,210,632 + AO356_27250 0.14 +0.9
6,210,633 - AO356_27250 0.14 -0.1
6,210,695 + AO356_27250 0.17 +3.0
6,210,886 + AO356_27250 0.29 +1.4
6,210,886 + AO356_27250 0.29 +2.1
6,210,887 - AO356_27250 0.29 +0.5
6,210,887 - AO356_27250 0.29 +0.4
6,210,992 + AO356_27250 0.35 +1.2
6,210,993 - AO356_27250 0.35 -1.1
6,210,996 + AO356_27250 0.35 +1.3
6,210,996 + AO356_27250 0.35 +1.6
6,210,996 + AO356_27250 0.35 +1.3
6,211,084 + AO356_27250 0.40 +1.5
6,211,084 + AO356_27250 0.40 +1.0
6,211,085 - AO356_27250 0.40 -0.6
6,211,085 - AO356_27250 0.40 -0.1
6,211,137 + AO356_27250 0.43 +1.4
6,211,151 + AO356_27250 0.44 +1.5
6,211,152 - AO356_27250 0.44 +0.9
6,211,152 - AO356_27250 0.44 -0.7
6,211,209 + AO356_27250 0.48 +1.2
6,211,240 - AO356_27250 0.50 -0.5
6,211,334 - AO356_27250 0.55 +0.4
6,211,814 + AO356_27250 0.83 +1.6
6,211,814 + AO356_27250 0.83 +1.5
6,211,815 - AO356_27250 0.83 -0.1
6,211,944 - -0.5
6,212,093 - +1.0
6,212,385 - +0.1
6,212,402 + +0.9
6,212,529 + AO356_27255 0.12 +0.1
6,212,534 + AO356_27255 0.13 -0.2
6,212,534 + AO356_27255 0.13 -0.4
6,212,535 - AO356_27255 0.13 -1.6
6,212,535 - AO356_27255 0.13 -0.3
6,212,535 - AO356_27255 0.13 +0.7
6,212,535 - AO356_27255 0.13 +0.2
6,212,568 + AO356_27255 0.16 +0.5
6,212,569 - AO356_27255 0.16 -0.8
6,212,569 - AO356_27255 0.16 +1.2
6,212,569 - AO356_27255 0.16 +0.2
6,212,622 + AO356_27255 0.22 +0.9
6,212,622 + AO356_27255 0.22 +0.7
6,212,622 + AO356_27255 0.22 -0.3
6,212,623 - AO356_27255 0.22 +0.2
6,212,626 + AO356_27255 0.22 +0.7
6,212,626 + AO356_27255 0.22 +0.2
6,212,666 + AO356_27255 0.26 +1.3
6,212,667 - AO356_27255 0.26 -0.2
6,212,667 - AO356_27255 0.26 -0.5
6,212,667 - AO356_27255 0.26 +1.4
6,212,667 - AO356_27255 0.26 +2.6
6,212,667 - AO356_27255 0.26 +1.3
6,212,929 + AO356_27255 0.51 +0.5
6,212,930 - AO356_27255 0.52 +0.2
6,212,934 - AO356_27255 0.52 +0.2
6,212,983 + AO356_27255 0.57 +0.4
6,212,985 + AO356_27255 0.57 -0.1
6,212,986 - AO356_27255 0.57 +0.9
6,212,986 - AO356_27255 0.57 -0.1
6,212,989 + AO356_27255 0.57 +0.9
6,212,989 + AO356_27255 0.57 -0.6

Or see this region's nucleotide sequence