Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_26870 and AO356_26875 are separated by 179 nucleotides AO356_26875 and AO356_26880 are separated by 33 nucleotides AO356_26880 and AO356_26885 are separated by 118 nucleotides
AO356_26870: AO356_26870 - short-chain dehydrogenase, at 6,118,565 to 6,119,344
_26870
AO356_26875: AO356_26875 - alcohol dehydrogenase, at 6,119,524 to 6,120,456
_26875
AO356_26880: AO356_26880 - DNA-binding protein, at 6,120,490 to 6,121,161
_26880
AO356_26885: AO356_26885 - LysR family transcriptional regulator, at 6,121,280 to 6,122,161
_26885
Position (kb)
6119
6120
6121 Strain fitness (log2 ratio)
-2
-1
0
1 at 6118.545 kb on + strand at 6118.792 kb on + strand, within AO356_26870 at 6118.793 kb on - strand, within AO356_26870 at 6118.793 kb on - strand, within AO356_26870 at 6119.057 kb on + strand, within AO356_26870 at 6119.058 kb on - strand, within AO356_26870 at 6119.134 kb on - strand, within AO356_26870 at 6119.134 kb on - strand, within AO356_26870 at 6119.134 kb on - strand, within AO356_26870 at 6119.202 kb on - strand, within AO356_26870 at 6119.280 kb on - strand at 6119.378 kb on - strand at 6119.378 kb on - strand at 6119.380 kb on - strand at 6119.380 kb on - strand at 6119.380 kb on - strand at 6119.512 kb on + strand at 6119.513 kb on - strand at 6119.549 kb on - strand at 6119.549 kb on - strand at 6119.647 kb on - strand, within AO356_26875 at 6119.767 kb on - strand, within AO356_26875 at 6120.015 kb on - strand, within AO356_26875 at 6120.036 kb on + strand, within AO356_26875 at 6120.154 kb on + strand, within AO356_26875 at 6120.155 kb on - strand, within AO356_26875 at 6120.565 kb on - strand, within AO356_26880 at 6120.634 kb on + strand, within AO356_26880 at 6120.634 kb on + strand, within AO356_26880 at 6120.829 kb on + strand, within AO356_26880 at 6120.829 kb on + strand, within AO356_26880 at 6120.830 kb on - strand, within AO356_26880 at 6120.919 kb on + strand, within AO356_26880 at 6120.994 kb on + strand, within AO356_26880 at 6120.994 kb on + strand, within AO356_26880 at 6120.995 kb on - strand, within AO356_26880 at 6121.159 kb on + strand at 6121.159 kb on + strand at 6121.160 kb on - strand at 6121.160 kb on - strand at 6121.177 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 6,118,545 + +0.7 6,118,792 + AO356_26870 0.29 +1.0 6,118,793 - AO356_26870 0.29 +0.3 6,118,793 - AO356_26870 0.29 -1.8 6,119,057 + AO356_26870 0.63 -0.2 6,119,058 - AO356_26870 0.63 -0.1 6,119,134 - AO356_26870 0.73 -0.5 6,119,134 - AO356_26870 0.73 +0.8 6,119,134 - AO356_26870 0.73 -0.1 6,119,202 - AO356_26870 0.82 -0.3 6,119,280 - +0.2 6,119,378 - -1.2 6,119,378 - +1.1 6,119,380 - +0.7 6,119,380 - -0.3 6,119,380 - -0.1 6,119,512 + -0.5 6,119,513 - +1.3 6,119,549 - +0.2 6,119,549 - -0.3 6,119,647 - AO356_26875 0.13 +0.1 6,119,767 - AO356_26875 0.26 +0.8 6,120,015 - AO356_26875 0.53 +0.7 6,120,036 + AO356_26875 0.55 +1.3 6,120,154 + AO356_26875 0.68 -1.7 6,120,155 - AO356_26875 0.68 +0.5 6,120,565 - AO356_26880 0.11 -0.5 6,120,634 + AO356_26880 0.21 -0.6 6,120,634 + AO356_26880 0.21 -1.1 6,120,829 + AO356_26880 0.50 -1.1 6,120,829 + AO356_26880 0.50 -0.2 6,120,830 - AO356_26880 0.51 -0.6 6,120,919 + AO356_26880 0.64 +0.4 6,120,994 + AO356_26880 0.75 +0.0 6,120,994 + AO356_26880 0.75 +0.3 6,120,995 - AO356_26880 0.75 -0.2 6,121,159 + -0.1 6,121,159 + +0.0 6,121,160 - -0.3 6,121,160 - +0.3 6,121,177 - -0.8
Or see this region's nucleotide sequence