Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_26730

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_26725 and AO356_26730 are separated by 47 nucleotidesAO356_26730 and AO356_26735 are separated by 614 nucleotides AO356_26725: AO356_26725 - GNAT family acetyltransferase, at 6,084,325 to 6,085,182 _26725 AO356_26730: AO356_26730 - cupin, at 6,085,230 to 6,085,937 _26730 AO356_26735: AO356_26735 - tartrate dehydrogenase, at 6,086,552 to 6,087,631 _26735 Position (kb) 6085 6086Strain fitness (log2 ratio) -1 0 1 2at 6084.266 kb on - strandat 6084.266 kb on - strandat 6084.351 kb on + strandat 6084.351 kb on + strandat 6084.355 kb on + strandat 6084.665 kb on - strand, within AO356_26725at 6085.145 kb on + strandat 6085.220 kb on + strandat 6085.234 kb on + strandat 6085.235 kb on - strandat 6085.341 kb on + strand, within AO356_26730at 6085.414 kb on - strand, within AO356_26730at 6085.414 kb on - strand, within AO356_26730at 6085.749 kb on + strand, within AO356_26730at 6085.749 kb on + strand, within AO356_26730at 6085.923 kb on + strandat 6085.924 kb on - strandat 6086.071 kb on + strandat 6086.071 kb on + strandat 6086.071 kb on + strandat 6086.071 kb on + strandat 6086.606 kb on + strandat 6086.606 kb on + strandat 6086.763 kb on + strand, within AO356_26735

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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6,084,266 - +0.3
6,084,266 - -0.2
6,084,351 + +0.7
6,084,351 + -0.2
6,084,355 + +1.1
6,084,665 - AO356_26725 0.40 -0.1
6,085,145 + +0.1
6,085,220 + +0.6
6,085,234 + -0.8
6,085,235 - +0.9
6,085,341 + AO356_26730 0.16 +1.4
6,085,414 - AO356_26730 0.26 +0.2
6,085,414 - AO356_26730 0.26 -0.5
6,085,749 + AO356_26730 0.73 +1.6
6,085,749 + AO356_26730 0.73 -0.3
6,085,923 + +0.4
6,085,924 - +0.2
6,086,071 + +1.0
6,086,071 + -0.3
6,086,071 + -0.6
6,086,071 + +0.0
6,086,606 + -0.3
6,086,606 + +2.7
6,086,763 + AO356_26735 0.20 +0.2

Or see this region's nucleotide sequence