Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_25800
Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
| Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.008 mg/ml |
|---|---|---|---|---|---|
| remove | |||||
| 5,832,903 | + | AO356_25795 | 0.68 | +1.4 | |
| 5,833,056 | + | AO356_25795 | 0.87 | -0.3 | |
| 5,833,056 | + | AO356_25795 | 0.87 | +1.0 | |
| 5,833,158 | + | -0.7 | |||
| 5,833,762 | + | -1.3 | |||
| 5,833,991 | + | AO356_25800 | 0.15 | -1.0 | |
| 5,833,992 | - | AO356_25800 | 0.15 | +0.0 | |
| 5,834,066 | + | AO356_25800 | 0.27 | -2.4 | |
| 5,834,261 | + | AO356_25800 | 0.60 | -0.4 | |
| 5,834,261 | + | AO356_25800 | 0.60 | -0.6 | |
| 5,834,262 | - | AO356_25800 | 0.60 | -0.5 | |
| 5,834,262 | - | AO356_25800 | 0.60 | -0.5 | |
| 5,834,493 | + | +0.1 | |||
| 5,834,509 | - | -0.3 | |||
| 5,834,509 | - | +1.0 | |||
| 5,834,720 | - | AO356_25805 | 0.12 | -0.7 | |
| 5,834,858 | - | AO356_25805 | 0.20 | -0.3 | |
| 5,834,915 | - | AO356_25805 | 0.24 | -0.5 | |
| 5,835,133 | + | AO356_25805 | 0.38 | +0.0 | |
| 5,835,179 | - | AO356_25805 | 0.40 | +0.3 | |
| 5,835,271 | + | AO356_25805 | 0.46 | -0.2 | |
| 5,835,272 | - | AO356_25805 | 0.46 | +0.5 | |
| 5,835,379 | + | AO356_25805 | 0.53 | +0.4 | |
| 5,835,397 | + | AO356_25805 | 0.54 | +0.3 | |
| 5,835,398 | - | AO356_25805 | 0.54 | -0.3 | |
| 5,835,398 | - | AO356_25805 | 0.54 | -0.1 | |
| 5,835,398 | - | AO356_25805 | 0.54 | +0.7 |
Or see this region's nucleotide sequence