Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25735 and AO356_25740 are separated by 82 nucleotides AO356_25740 and AO356_25745 overlap by 11 nucleotides AO356_25745 and AO356_25750 are separated by 2 nucleotides AO356_25750 and AO356_25755 are separated by 60 nucleotides AO356_25755 and AO356_25760 are separated by 132 nucleotides
AO356_25735: AO356_25735 - 3,4-dihydroxy-2-butanone 4-phosphate synthase, at 5,820,961 to 5,822,070
_25735
AO356_25740: AO356_25740 - hypothetical protein, at 5,822,153 to 5,822,455
_25740
AO356_25745: AO356_25745 - NUDIX hydrolase, at 5,822,445 to 5,823,008
_25745
AO356_25750: AO356_25750 - GntR family transcriptional regulator, at 5,823,011 to 5,823,763
_25750
AO356_25755: AO356_25755 - 4-carboxymuconolactone decarboxylase, at 5,823,824 to 5,824,228
_25755
AO356_25760: AO356_25760 - flavin reductase, at 5,824,361 to 5,824,846
_25760
Position (kb) 5823
5824 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 5822.153 kb on - strand at 5822.163 kb on - strand at 5822.201 kb on + strand, within AO356_25740 at 5822.210 kb on + strand, within AO356_25740 at 5822.211 kb on - strand, within AO356_25740 at 5822.242 kb on - strand, within AO356_25740 at 5822.242 kb on - strand, within AO356_25740 at 5822.244 kb on - strand, within AO356_25740 at 5822.244 kb on - strand, within AO356_25740 at 5822.244 kb on - strand, within AO356_25740 at 5822.336 kb on + strand, within AO356_25740 at 5822.358 kb on - strand, within AO356_25740 at 5822.372 kb on + strand, within AO356_25740 at 5822.489 kb on - strand at 5822.489 kb on - strand at 5822.489 kb on - strand at 5822.489 kb on - strand at 5822.489 kb on - strand at 5822.497 kb on + strand at 5822.498 kb on - strand at 5822.522 kb on + strand, within AO356_25745 at 5822.524 kb on + strand, within AO356_25745 at 5822.524 kb on + strand, within AO356_25745 at 5822.557 kb on + strand, within AO356_25745 at 5822.557 kb on + strand, within AO356_25745 at 5822.557 kb on + strand, within AO356_25745 at 5822.558 kb on - strand, within AO356_25745 at 5822.558 kb on - strand, within AO356_25745 at 5822.662 kb on + strand, within AO356_25745 at 5822.662 kb on + strand, within AO356_25745 at 5822.662 kb on + strand, within AO356_25745 at 5822.662 kb on + strand, within AO356_25745 at 5822.662 kb on + strand, within AO356_25745 at 5822.663 kb on - strand, within AO356_25745 at 5822.663 kb on - strand, within AO356_25745 at 5822.663 kb on - strand, within AO356_25745 at 5822.722 kb on - strand, within AO356_25745 at 5822.845 kb on + strand, within AO356_25745 at 5822.905 kb on + strand, within AO356_25745 at 5823.097 kb on - strand, within AO356_25750 at 5823.253 kb on - strand, within AO356_25750 at 5823.487 kb on - strand, within AO356_25750 at 5823.778 kb on - strand at 5823.781 kb on - strand at 5823.781 kb on - strand at 5823.921 kb on + strand, within AO356_25755 at 5823.922 kb on - strand, within AO356_25755 at 5823.922 kb on - strand, within AO356_25755 at 5823.922 kb on - strand, within AO356_25755 at 5823.922 kb on - strand, within AO356_25755 at 5823.951 kb on - strand, within AO356_25755 at 5824.167 kb on + strand, within AO356_25755 at 5824.167 kb on + strand, within AO356_25755 at 5824.482 kb on + strand, within AO356_25760 at 5824.483 kb on - strand, within AO356_25760 at 5824.483 kb on - strand, within AO356_25760 at 5824.602 kb on + strand, within AO356_25760 at 5824.686 kb on + strand, within AO356_25760 at 5824.687 kb on - strand, within AO356_25760 at 5824.687 kb on - strand, within AO356_25760
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,822,153 - -0.0 5,822,163 - +0.5 5,822,201 + AO356_25740 0.16 +0.1 5,822,210 + AO356_25740 0.19 -2.3 5,822,211 - AO356_25740 0.19 +0.4 5,822,242 - AO356_25740 0.29 -0.0 5,822,242 - AO356_25740 0.29 +0.4 5,822,244 - AO356_25740 0.30 -0.3 5,822,244 - AO356_25740 0.30 -0.5 5,822,244 - AO356_25740 0.30 -3.3 5,822,336 + AO356_25740 0.60 -0.5 5,822,358 - AO356_25740 0.68 -0.1 5,822,372 + AO356_25740 0.72 -1.7 5,822,489 - -0.1 5,822,489 - -1.2 5,822,489 - -0.3 5,822,489 - -1.3 5,822,489 - +1.5 5,822,497 + -0.5 5,822,498 - +0.5 5,822,522 + AO356_25745 0.14 -0.4 5,822,524 + AO356_25745 0.14 +0.3 5,822,524 + AO356_25745 0.14 -0.0 5,822,557 + AO356_25745 0.20 +1.7 5,822,557 + AO356_25745 0.20 +0.2 5,822,557 + AO356_25745 0.20 +0.0 5,822,558 - AO356_25745 0.20 +0.2 5,822,558 - AO356_25745 0.20 +0.1 5,822,662 + AO356_25745 0.38 +0.1 5,822,662 + AO356_25745 0.38 +0.3 5,822,662 + AO356_25745 0.38 +1.0 5,822,662 + AO356_25745 0.38 +0.1 5,822,662 + AO356_25745 0.38 +0.6 5,822,663 - AO356_25745 0.39 -0.6 5,822,663 - AO356_25745 0.39 -0.0 5,822,663 - AO356_25745 0.39 -0.4 5,822,722 - AO356_25745 0.49 -0.3 5,822,845 + AO356_25745 0.71 +1.4 5,822,905 + AO356_25745 0.82 +0.3 5,823,097 - AO356_25750 0.11 -0.0 5,823,253 - AO356_25750 0.32 -1.0 5,823,487 - AO356_25750 0.63 -1.0 5,823,778 - +0.5 5,823,781 - +0.6 5,823,781 - -0.0 5,823,921 + AO356_25755 0.24 +1.2 5,823,922 - AO356_25755 0.24 -0.8 5,823,922 - AO356_25755 0.24 +1.6 5,823,922 - AO356_25755 0.24 -0.0 5,823,922 - AO356_25755 0.24 -0.8 5,823,951 - AO356_25755 0.31 -0.7 5,824,167 + AO356_25755 0.85 +1.5 5,824,167 + AO356_25755 0.85 -0.7 5,824,482 + AO356_25760 0.25 +1.1 5,824,483 - AO356_25760 0.25 +0.2 5,824,483 - AO356_25760 0.25 +0.5 5,824,602 + AO356_25760 0.50 +0.2 5,824,686 + AO356_25760 0.67 +0.5 5,824,687 - AO356_25760 0.67 -1.1 5,824,687 - AO356_25760 0.67 -0.3
Or see this region's nucleotide sequence