Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_25680

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_25675 and AO356_25680 are separated by 325 nucleotidesAO356_25680 and AO356_25685 are separated by 15 nucleotidesAO356_25685 and AO356_25690 are separated by 319 nucleotides AO356_25675: AO356_25675 - histidine kinase, at 5,805,326 to 5,806,687 _25675 AO356_25680: AO356_25680 - carbon starvation protein A, at 5,807,013 to 5,809,073 _25680 AO356_25685: AO356_25685 - hypothetical protein, at 5,809,089 to 5,809,286 _25685 AO356_25690: AO356_25690 - chemotaxis protein, at 5,809,606 to 5,811,402 _25690 Position (kb) 5807 5808 5809 5810Strain fitness (log2 ratio) -2 -1 0 1 2at 5806.200 kb on + strand, within AO356_25675at 5806.200 kb on + strand, within AO356_25675at 5806.201 kb on - strand, within AO356_25675at 5806.248 kb on + strand, within AO356_25675at 5806.335 kb on + strand, within AO356_25675at 5806.335 kb on + strand, within AO356_25675at 5806.336 kb on - strand, within AO356_25675at 5806.336 kb on - strand, within AO356_25675at 5806.336 kb on - strand, within AO356_25675at 5806.336 kb on - strand, within AO356_25675at 5806.404 kb on + strand, within AO356_25675at 5806.405 kb on - strand, within AO356_25675at 5806.521 kb on + strand, within AO356_25675at 5806.521 kb on + strand, within AO356_25675at 5806.521 kb on + strand, within AO356_25675at 5806.521 kb on + strand, within AO356_25675at 5806.522 kb on - strand, within AO356_25675at 5806.522 kb on - strand, within AO356_25675at 5806.522 kb on - strand, within AO356_25675at 5806.691 kb on + strandat 5806.691 kb on + strandat 5806.733 kb on + strandat 5806.733 kb on + strandat 5806.733 kb on + strandat 5806.734 kb on - strandat 5806.757 kb on + strandat 5806.758 kb on - strandat 5806.867 kb on + strandat 5806.871 kb on + strandat 5806.871 kb on + strandat 5806.871 kb on + strandat 5806.872 kb on - strandat 5806.872 kb on - strandat 5806.877 kb on + strandat 5806.877 kb on + strandat 5806.878 kb on - strandat 5806.878 kb on - strandat 5806.881 kb on + strandat 5806.881 kb on + strandat 5806.882 kb on - strandat 5806.882 kb on - strandat 5806.892 kb on + strandat 5806.892 kb on + strandat 5806.893 kb on - strandat 5806.893 kb on - strandat 5806.893 kb on - strandat 5806.893 kb on - strandat 5806.893 kb on - strandat 5806.893 kb on - strandat 5806.896 kb on + strandat 5806.897 kb on - strandat 5806.897 kb on - strandat 5806.899 kb on + strandat 5806.900 kb on - strandat 5806.911 kb on - strandat 5806.911 kb on - strandat 5806.966 kb on - strandat 5806.966 kb on - strandat 5809.519 kb on - strandat 5809.682 kb on - strandat 5809.721 kb on + strandat 5809.722 kb on - strandat 5809.967 kb on + strand, within AO356_25690at 5809.980 kb on - strand, within AO356_25690

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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5,806,200 + AO356_25675 0.64 -1.5
5,806,200 + AO356_25675 0.64 -0.8
5,806,201 - AO356_25675 0.64 +1.2
5,806,248 + AO356_25675 0.68 -0.3
5,806,335 + AO356_25675 0.74 +0.2
5,806,335 + AO356_25675 0.74 +2.0
5,806,336 - AO356_25675 0.74 -0.5
5,806,336 - AO356_25675 0.74 -2.2
5,806,336 - AO356_25675 0.74 -0.0
5,806,336 - AO356_25675 0.74 -0.6
5,806,404 + AO356_25675 0.79 -0.8
5,806,405 - AO356_25675 0.79 +0.4
5,806,521 + AO356_25675 0.88 -0.8
5,806,521 + AO356_25675 0.88 -0.5
5,806,521 + AO356_25675 0.88 +0.1
5,806,521 + AO356_25675 0.88 -0.5
5,806,522 - AO356_25675 0.88 +0.0
5,806,522 - AO356_25675 0.88 +0.2
5,806,522 - AO356_25675 0.88 -0.1
5,806,691 + -0.3
5,806,691 + -1.2
5,806,733 + +1.5
5,806,733 + -0.4
5,806,733 + +1.2
5,806,734 - +1.3
5,806,757 + +0.2
5,806,758 - -1.0
5,806,867 + +0.6
5,806,871 + -0.4
5,806,871 + +0.4
5,806,871 + -0.3
5,806,872 - +0.3
5,806,872 - +0.9
5,806,877 + -0.1
5,806,877 + +0.0
5,806,878 - -1.2
5,806,878 - +0.1
5,806,881 + -2.4
5,806,881 + +1.2
5,806,882 - +1.4
5,806,882 - -0.5
5,806,892 + -0.1
5,806,892 + +1.0
5,806,893 - +0.1
5,806,893 - -0.2
5,806,893 - +0.7
5,806,893 - +1.7
5,806,893 - -1.8
5,806,893 - -0.5
5,806,896 + -0.5
5,806,897 - -0.7
5,806,897 - -0.2
5,806,899 + -0.4
5,806,900 - -0.0
5,806,911 - -0.1
5,806,911 - +0.7
5,806,966 - -0.5
5,806,966 - +0.3
5,809,519 - -0.0
5,809,682 - -1.7
5,809,721 + +1.3
5,809,722 - -0.7
5,809,967 + AO356_25690 0.20 -0.7
5,809,980 - AO356_25690 0.21 -0.2

Or see this region's nucleotide sequence