Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_25655

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_25650 and AO356_25655 are separated by 92 nucleotidesAO356_25655 and AO356_25660 are separated by 156 nucleotides AO356_25650: AO356_25650 - ArtI protein, at 5,800,780 to 5,801,571 _25650 AO356_25655: AO356_25655 - TetR family transcriptional regulator, at 5,801,664 to 5,802,317 _25655 AO356_25660: AO356_25660 - MFS transporter, at 5,802,474 to 5,803,688 _25660 Position (kb) 5801 5802 5803Strain fitness (log2 ratio) -1 0 1at 5800.868 kb on + strand, within AO356_25650at 5800.868 kb on + strand, within AO356_25650at 5800.868 kb on + strand, within AO356_25650at 5800.868 kb on + strand, within AO356_25650at 5800.868 kb on + strand, within AO356_25650at 5800.869 kb on - strand, within AO356_25650at 5800.904 kb on + strand, within AO356_25650at 5800.919 kb on + strand, within AO356_25650at 5800.919 kb on + strand, within AO356_25650at 5800.976 kb on + strand, within AO356_25650at 5801.231 kb on + strand, within AO356_25650at 5801.399 kb on + strand, within AO356_25650at 5801.400 kb on - strand, within AO356_25650at 5801.425 kb on - strand, within AO356_25650at 5801.427 kb on - strand, within AO356_25650at 5801.427 kb on - strand, within AO356_25650at 5801.617 kb on + strandat 5801.618 kb on - strandat 5801.618 kb on - strandat 5801.620 kb on + strandat 5801.621 kb on - strandat 5801.621 kb on - strandat 5801.710 kb on + strandat 5801.711 kb on - strandat 5801.711 kb on - strandat 5801.743 kb on + strand, within AO356_25655at 5801.835 kb on - strand, within AO356_25655at 5802.133 kb on + strand, within AO356_25655at 5802.133 kb on + strand, within AO356_25655at 5802.140 kb on - strand, within AO356_25655at 5802.281 kb on + strandat 5802.402 kb on - strandat 5802.474 kb on - strandat 5802.474 kb on - strandat 5802.556 kb on + strandat 5802.557 kb on - strandat 5802.777 kb on + strand, within AO356_25660at 5802.778 kb on - strand, within AO356_25660at 5802.957 kb on + strand, within AO356_25660at 5803.110 kb on - strand, within AO356_25660at 5803.139 kb on - strand, within AO356_25660

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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5,800,868 + AO356_25650 0.11 -0.2
5,800,868 + AO356_25650 0.11 -0.3
5,800,868 + AO356_25650 0.11 -0.0
5,800,868 + AO356_25650 0.11 +1.1
5,800,868 + AO356_25650 0.11 -0.3
5,800,869 - AO356_25650 0.11 -0.6
5,800,904 + AO356_25650 0.16 +0.5
5,800,919 + AO356_25650 0.18 -0.6
5,800,919 + AO356_25650 0.18 +0.3
5,800,976 + AO356_25650 0.25 -0.2
5,801,231 + AO356_25650 0.57 +0.0
5,801,399 + AO356_25650 0.78 +0.4
5,801,400 - AO356_25650 0.78 -0.0
5,801,425 - AO356_25650 0.81 -0.8
5,801,427 - AO356_25650 0.82 -0.2
5,801,427 - AO356_25650 0.82 +0.2
5,801,617 + -0.4
5,801,618 - +0.3
5,801,618 - -0.8
5,801,620 + +0.0
5,801,621 - +0.7
5,801,621 - -0.8
5,801,710 + +0.5
5,801,711 - -0.0
5,801,711 - +0.2
5,801,743 + AO356_25655 0.12 -0.8
5,801,835 - AO356_25655 0.26 +0.0
5,802,133 + AO356_25655 0.72 -1.3
5,802,133 + AO356_25655 0.72 -1.4
5,802,140 - AO356_25655 0.73 -0.8
5,802,281 + -0.9
5,802,402 - +0.4
5,802,474 - -0.2
5,802,474 - -0.6
5,802,556 + -0.6
5,802,557 - -0.2
5,802,777 + AO356_25660 0.25 +0.1
5,802,778 - AO356_25660 0.25 +0.5
5,802,957 + AO356_25660 0.40 -1.6
5,803,110 - AO356_25660 0.52 +0.8
5,803,139 - AO356_25660 0.55 +0.2

Or see this region's nucleotide sequence