Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_25110 and AO356_25115 overlap by 4 nucleotides AO356_25115 and AO356_25120 are separated by 129 nucleotides AO356_25120 and AO356_25125 are separated by 93 nucleotides
AO356_25110: AO356_25110 - protein DnrP, at 5,685,491 to 5,685,691
_25110
AO356_25115: AO356_25115 - transcription factor, at 5,685,688 to 5,686,371
_25115
AO356_25120: AO356_25120 - hypothetical protein, at 5,686,501 to 5,686,830
_25120
AO356_25125: AO356_25125 - short-chain dehydrogenase, at 5,686,924 to 5,688,114
_25125
Position (kb)
5686
5687 Strain fitness (log2 ratio)
-1
0
1
2 at 5685.666 kb on + strand, within AO356_25110 at 5685.667 kb on - strand, within AO356_25110 at 5686.025 kb on + strand, within AO356_25115 at 5686.025 kb on + strand, within AO356_25115 at 5686.026 kb on - strand, within AO356_25115 at 5686.026 kb on - strand, within AO356_25115 at 5686.026 kb on - strand, within AO356_25115 at 5686.026 kb on - strand, within AO356_25115 at 5686.026 kb on - strand, within AO356_25115 at 5686.085 kb on + strand, within AO356_25115 at 5686.085 kb on + strand, within AO356_25115 at 5686.085 kb on + strand, within AO356_25115 at 5686.211 kb on + strand, within AO356_25115 at 5686.211 kb on + strand, within AO356_25115 at 5686.212 kb on - strand, within AO356_25115 at 5686.386 kb on + strand at 5686.387 kb on - strand at 5686.387 kb on - strand at 5686.387 kb on - strand at 5686.387 kb on - strand at 5686.394 kb on - strand at 5686.645 kb on + strand, within AO356_25120 at 5686.659 kb on - strand, within AO356_25120 at 5686.723 kb on + strand, within AO356_25120 at 5686.923 kb on + strand at 5686.923 kb on + strand at 5686.923 kb on + strand at 5686.924 kb on - strand at 5686.924 kb on - strand at 5686.924 kb on - strand at 5686.924 kb on - strand at 5686.924 kb on - strand at 5686.924 kb on - strand at 5686.924 kb on - strand at 5687.372 kb on + strand, within AO356_25125 at 5687.614 kb on + strand, within AO356_25125 at 5687.614 kb on + strand, within AO356_25125 at 5687.615 kb on - strand, within AO356_25125 at 5687.615 kb on - strand, within AO356_25125 at 5687.615 kb on - strand, within AO356_25125 at 5687.615 kb on - strand, within AO356_25125 at 5687.615 kb on - strand, within AO356_25125 at 5687.615 kb on - strand, within AO356_25125 at 5687.615 kb on - strand, within AO356_25125
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,685,666 + AO356_25110 0.87 +0.2 5,685,667 - AO356_25110 0.88 +0.1 5,686,025 + AO356_25115 0.49 +0.2 5,686,025 + AO356_25115 0.49 -0.8 5,686,026 - AO356_25115 0.49 +0.8 5,686,026 - AO356_25115 0.49 -0.1 5,686,026 - AO356_25115 0.49 +0.9 5,686,026 - AO356_25115 0.49 +1.1 5,686,026 - AO356_25115 0.49 +0.7 5,686,085 + AO356_25115 0.58 -0.6 5,686,085 + AO356_25115 0.58 -0.5 5,686,085 + AO356_25115 0.58 -0.4 5,686,211 + AO356_25115 0.76 +0.3 5,686,211 + AO356_25115 0.76 +0.2 5,686,212 - AO356_25115 0.77 +1.3 5,686,386 + +0.4 5,686,387 - +0.8 5,686,387 - +2.0 5,686,387 - -0.2 5,686,387 - -0.7 5,686,394 - +0.4 5,686,645 + AO356_25120 0.44 +1.8 5,686,659 - AO356_25120 0.48 +0.6 5,686,723 + AO356_25120 0.67 +0.4 5,686,923 + +0.9 5,686,923 + +0.2 5,686,923 + +1.3 5,686,924 - -0.1 5,686,924 - -0.2 5,686,924 - +0.6 5,686,924 - -0.4 5,686,924 - +0.8 5,686,924 - +1.1 5,686,924 - -0.6 5,687,372 + AO356_25125 0.38 +1.3 5,687,614 + AO356_25125 0.58 +0.4 5,687,614 + AO356_25125 0.58 +0.3 5,687,615 - AO356_25125 0.58 +1.9 5,687,615 - AO356_25125 0.58 +1.7 5,687,615 - AO356_25125 0.58 +0.5 5,687,615 - AO356_25125 0.58 -0.1 5,687,615 - AO356_25125 0.58 -0.1 5,687,615 - AO356_25125 0.58 -1.2 5,687,615 - AO356_25125 0.58 +0.5
Or see this region's nucleotide sequence