Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_23635 and AO356_23640 overlap by 4 nucleotides AO356_23640 and AO356_23645 are separated by 38 nucleotides AO356_23645 and AO356_23650 overlap by 4 nucleotides AO356_23650 and AO356_23655 overlap by 4 nucleotides
AO356_23635: AO356_23635 - AP endonuclease, at 5,306,107 to 5,307,336
_23635
AO356_23640: AO356_23640 - hydrolase TatD, at 5,307,333 to 5,308,217
_23640
AO356_23645: AO356_23645 - hypothetical protein, at 5,308,256 to 5,309,029
_23645
AO356_23650: AO356_23650 - prenyltransferase, at 5,309,026 to 5,309,916
_23650
AO356_23655: AO356_23655 - 3-dehydroquinate synthase, at 5,309,913 to 5,311,787
_23655
Position (kb)
5308
5309
5310 Strain fitness (log2 ratio)
-1
0
1 at 5307.649 kb on + strand, within AO356_23640 at 5307.649 kb on + strand, within AO356_23640 at 5308.069 kb on + strand, within AO356_23640 at 5308.208 kb on - strand at 5308.488 kb on - strand, within AO356_23645 at 5308.546 kb on - strand, within AO356_23645 at 5309.083 kb on + strand at 5309.083 kb on + strand at 5309.083 kb on + strand at 5309.083 kb on + strand at 5309.084 kb on - strand at 5309.084 kb on - strand at 5309.084 kb on - strand at 5309.084 kb on - strand at 5309.084 kb on - strand at 5309.210 kb on + strand, within AO356_23650 at 5309.210 kb on + strand, within AO356_23650 at 5309.237 kb on - strand, within AO356_23650 at 5309.274 kb on - strand, within AO356_23650 at 5309.357 kb on + strand, within AO356_23650 at 5309.357 kb on + strand, within AO356_23650 at 5309.358 kb on - strand, within AO356_23650 at 5309.375 kb on + strand, within AO356_23650 at 5309.376 kb on - strand, within AO356_23650 at 5309.376 kb on - strand, within AO356_23650 at 5309.448 kb on - strand, within AO356_23650 at 5309.492 kb on + strand, within AO356_23650 at 5309.617 kb on + strand, within AO356_23650
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,307,649 + AO356_23640 0.36 -0.1 5,307,649 + AO356_23640 0.36 +0.2 5,308,069 + AO356_23640 0.83 +0.2 5,308,208 - -0.3 5,308,488 - AO356_23645 0.30 +0.7 5,308,546 - AO356_23645 0.37 +0.9 5,309,083 + +0.8 5,309,083 + -0.6 5,309,083 + +0.8 5,309,083 + +0.4 5,309,084 - +0.5 5,309,084 - +0.5 5,309,084 - -0.3 5,309,084 - +0.3 5,309,084 - -0.8 5,309,210 + AO356_23650 0.21 -0.3 5,309,210 + AO356_23650 0.21 +0.3 5,309,237 - AO356_23650 0.24 +0.7 5,309,274 - AO356_23650 0.28 +0.4 5,309,357 + AO356_23650 0.37 -0.6 5,309,357 + AO356_23650 0.37 -0.3 5,309,358 - AO356_23650 0.37 +0.8 5,309,375 + AO356_23650 0.39 +0.2 5,309,376 - AO356_23650 0.39 +0.3 5,309,376 - AO356_23650 0.39 +0.5 5,309,448 - AO356_23650 0.47 +0.5 5,309,492 + AO356_23650 0.52 -0.5 5,309,617 + AO356_23650 0.66 +0.6
Or see this region's nucleotide sequence