Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22470 and AO356_22475 are separated by 56 nucleotides AO356_22475 and AO356_22480 are separated by 189 nucleotides
AO356_22470: AO356_22470 - type III effector, at 5,020,670 to 5,022,061
_22470
AO356_22475: AO356_22475 - MFS transporter, at 5,022,118 to 5,023,461
_22475
AO356_22480: AO356_22480 - oxidoreductase, at 5,023,651 to 5,025,216
_22480
Position (kb)
5022
5023
5024 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 5021.118 kb on + strand, within AO356_22470 at 5021.118 kb on + strand, within AO356_22470 at 5021.119 kb on - strand, within AO356_22470 at 5021.167 kb on + strand, within AO356_22470 at 5021.214 kb on + strand, within AO356_22470 at 5021.332 kb on + strand, within AO356_22470 at 5021.332 kb on + strand, within AO356_22470 at 5021.332 kb on + strand, within AO356_22470 at 5021.332 kb on + strand, within AO356_22470 at 5021.332 kb on + strand, within AO356_22470 at 5021.332 kb on + strand, within AO356_22470 at 5021.332 kb on + strand, within AO356_22470 at 5021.332 kb on + strand, within AO356_22470 at 5021.332 kb on + strand, within AO356_22470 at 5021.332 kb on + strand, within AO356_22470 at 5021.333 kb on - strand, within AO356_22470 at 5021.333 kb on - strand, within AO356_22470 at 5021.333 kb on - strand, within AO356_22470 at 5021.333 kb on - strand, within AO356_22470 at 5021.333 kb on - strand, within AO356_22470 at 5021.333 kb on - strand, within AO356_22470 at 5021.368 kb on + strand, within AO356_22470 at 5021.369 kb on - strand, within AO356_22470 at 5021.369 kb on - strand, within AO356_22470 at 5021.414 kb on + strand, within AO356_22470 at 5021.415 kb on - strand, within AO356_22470 at 5021.452 kb on - strand, within AO356_22470 at 5021.452 kb on - strand, within AO356_22470 at 5021.460 kb on - strand, within AO356_22470 at 5021.460 kb on - strand, within AO356_22470 at 5021.460 kb on - strand, within AO356_22470 at 5021.615 kb on - strand, within AO356_22470 at 5021.637 kb on + strand, within AO356_22470 at 5021.638 kb on - strand, within AO356_22470 at 5021.638 kb on - strand, within AO356_22470 at 5021.810 kb on + strand, within AO356_22470 at 5021.810 kb on + strand, within AO356_22470 at 5021.830 kb on + strand, within AO356_22470 at 5021.857 kb on + strand, within AO356_22470 at 5021.858 kb on - strand, within AO356_22470 at 5021.858 kb on - strand, within AO356_22470 at 5021.859 kb on + strand, within AO356_22470 at 5021.859 kb on + strand, within AO356_22470 at 5021.859 kb on + strand, within AO356_22470 at 5021.860 kb on - strand, within AO356_22470 at 5021.872 kb on + strand, within AO356_22470 at 5021.872 kb on + strand, within AO356_22470 at 5021.872 kb on + strand, within AO356_22470 at 5021.872 kb on + strand, within AO356_22470 at 5022.029 kb on + strand at 5022.036 kb on + strand at 5022.053 kb on - strand at 5022.059 kb on + strand at 5022.059 kb on + strand at 5022.060 kb on - strand at 5022.092 kb on + strand at 5022.093 kb on - strand at 5022.093 kb on - strand at 5022.097 kb on - strand at 5022.117 kb on + strand at 5022.118 kb on - strand at 5022.118 kb on - strand at 5022.134 kb on + strand at 5022.139 kb on - strand at 5022.139 kb on - strand at 5022.163 kb on - strand at 5022.227 kb on + strand at 5022.227 kb on + strand at 5022.235 kb on + strand at 5022.235 kb on + strand at 5022.235 kb on + strand at 5022.236 kb on - strand at 5022.236 kb on - strand at 5022.244 kb on + strand at 5022.245 kb on - strand at 5022.250 kb on + strand at 5022.251 kb on - strand at 5022.401 kb on + strand, within AO356_22475 at 5022.421 kb on + strand, within AO356_22475 at 5022.421 kb on + strand, within AO356_22475 at 5022.421 kb on + strand, within AO356_22475 at 5022.474 kb on + strand, within AO356_22475 at 5022.474 kb on + strand, within AO356_22475 at 5022.474 kb on + strand, within AO356_22475 at 5022.474 kb on + strand, within AO356_22475 at 5022.475 kb on - strand, within AO356_22475 at 5022.475 kb on - strand, within AO356_22475 at 5022.475 kb on - strand, within AO356_22475 at 5022.479 kb on - strand, within AO356_22475 at 5022.479 kb on - strand, within AO356_22475 at 5022.488 kb on + strand, within AO356_22475 at 5022.488 kb on + strand, within AO356_22475 at 5022.489 kb on - strand, within AO356_22475 at 5022.557 kb on - strand, within AO356_22475 at 5022.557 kb on - strand, within AO356_22475 at 5022.557 kb on - strand, within AO356_22475 at 5022.578 kb on + strand, within AO356_22475 at 5022.578 kb on + strand, within AO356_22475 at 5022.579 kb on - strand, within AO356_22475 at 5022.579 kb on - strand, within AO356_22475 at 5022.579 kb on - strand, within AO356_22475 at 5022.613 kb on + strand, within AO356_22475 at 5022.613 kb on + strand, within AO356_22475 at 5022.614 kb on - strand, within AO356_22475 at 5022.689 kb on + strand, within AO356_22475 at 5022.689 kb on + strand, within AO356_22475 at 5022.689 kb on + strand, within AO356_22475 at 5022.689 kb on + strand, within AO356_22475 at 5022.709 kb on + strand, within AO356_22475 at 5022.710 kb on - strand, within AO356_22475 at 5022.710 kb on - strand, within AO356_22475 at 5022.711 kb on + strand, within AO356_22475 at 5022.711 kb on + strand, within AO356_22475 at 5022.712 kb on - strand, within AO356_22475 at 5022.877 kb on + strand, within AO356_22475 at 5022.877 kb on + strand, within AO356_22475 at 5022.877 kb on + strand, within AO356_22475 at 5022.878 kb on - strand, within AO356_22475 at 5022.878 kb on - strand, within AO356_22475 at 5022.878 kb on - strand, within AO356_22475 at 5022.882 kb on + strand, within AO356_22475 at 5022.882 kb on + strand, within AO356_22475 at 5022.883 kb on - strand, within AO356_22475 at 5022.890 kb on + strand, within AO356_22475 at 5022.962 kb on - strand, within AO356_22475 at 5022.962 kb on - strand, within AO356_22475 at 5023.016 kb on + strand, within AO356_22475 at 5023.016 kb on + strand, within AO356_22475 at 5023.016 kb on + strand, within AO356_22475 at 5023.016 kb on + strand, within AO356_22475 at 5023.016 kb on + strand, within AO356_22475 at 5023.016 kb on + strand, within AO356_22475 at 5023.016 kb on + strand, within AO356_22475 at 5023.017 kb on - strand, within AO356_22475 at 5023.017 kb on - strand, within AO356_22475 at 5023.017 kb on - strand, within AO356_22475 at 5023.017 kb on - strand, within AO356_22475 at 5023.017 kb on - strand, within AO356_22475 at 5023.020 kb on + strand, within AO356_22475 at 5023.020 kb on + strand, within AO356_22475 at 5023.020 kb on + strand, within AO356_22475 at 5023.021 kb on - strand, within AO356_22475 at 5023.021 kb on - strand, within AO356_22475 at 5023.038 kb on - strand, within AO356_22475 at 5023.038 kb on - strand, within AO356_22475 at 5023.143 kb on - strand, within AO356_22475 at 5023.143 kb on - strand, within AO356_22475 at 5023.164 kb on - strand, within AO356_22475 at 5023.213 kb on + strand, within AO356_22475 at 5023.213 kb on + strand, within AO356_22475 at 5023.213 kb on + strand, within AO356_22475 at 5023.214 kb on - strand, within AO356_22475 at 5023.214 kb on - strand, within AO356_22475 at 5023.214 kb on - strand, within AO356_22475 at 5023.351 kb on + strand at 5023.364 kb on - strand at 5023.364 kb on - strand at 5023.379 kb on - strand at 5023.417 kb on + strand at 5023.417 kb on + strand at 5023.418 kb on - strand at 5023.418 kb on - strand at 5023.460 kb on - strand at 5023.460 kb on - strand at 5023.533 kb on + strand at 5023.533 kb on + strand at 5023.534 kb on - strand at 5023.589 kb on + strand at 5023.589 kb on + strand at 5023.589 kb on + strand at 5023.589 kb on + strand at 5023.589 kb on + strand at 5023.589 kb on + strand at 5023.590 kb on - strand at 5023.590 kb on - strand at 5023.590 kb on - strand at 5023.590 kb on - strand at 5023.590 kb on - strand at 5023.591 kb on + strand at 5023.591 kb on + strand at 5023.591 kb on + strand at 5023.591 kb on + strand at 5023.592 kb on - strand at 5023.592 kb on - strand at 5023.592 kb on - strand at 5023.592 kb on - strand at 5023.592 kb on - strand at 5023.592 kb on - strand at 5023.619 kb on + strand at 5023.619 kb on + strand at 5023.619 kb on + strand at 5023.619 kb on + strand at 5023.619 kb on + strand at 5023.620 kb on - strand at 5023.620 kb on - strand at 5023.620 kb on - strand at 5023.632 kb on + strand at 5023.632 kb on + strand at 5023.633 kb on - strand at 5023.633 kb on - strand at 5023.652 kb on + strand at 5023.652 kb on + strand at 5023.734 kb on + strand at 5023.735 kb on - strand at 5023.796 kb on + strand at 5023.797 kb on - strand at 5023.869 kb on - strand, within AO356_22480 at 5023.869 kb on - strand, within AO356_22480 at 5024.237 kb on + strand, within AO356_22480 at 5024.285 kb on + strand, within AO356_22480 at 5024.285 kb on - strand, within AO356_22480 at 5024.296 kb on - strand, within AO356_22480 at 5024.296 kb on - strand, within AO356_22480
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,021,118 + AO356_22470 0.32 +0.5 5,021,118 + AO356_22470 0.32 -0.9 5,021,119 - AO356_22470 0.32 -2.1 5,021,167 + AO356_22470 0.36 +1.2 5,021,214 + AO356_22470 0.39 +0.1 5,021,332 + AO356_22470 0.48 +0.8 5,021,332 + AO356_22470 0.48 -0.4 5,021,332 + AO356_22470 0.48 -1.0 5,021,332 + AO356_22470 0.48 +0.3 5,021,332 + AO356_22470 0.48 -0.2 5,021,332 + AO356_22470 0.48 +2.9 5,021,332 + AO356_22470 0.48 +0.3 5,021,332 + AO356_22470 0.48 -0.4 5,021,332 + AO356_22470 0.48 -0.6 5,021,332 + AO356_22470 0.48 -1.1 5,021,333 - AO356_22470 0.48 -1.2 5,021,333 - AO356_22470 0.48 +0.5 5,021,333 - AO356_22470 0.48 +0.0 5,021,333 - AO356_22470 0.48 -0.2 5,021,333 - AO356_22470 0.48 -0.6 5,021,333 - AO356_22470 0.48 +0.5 5,021,368 + AO356_22470 0.50 +0.5 5,021,369 - AO356_22470 0.50 -0.2 5,021,369 - AO356_22470 0.50 +0.4 5,021,414 + AO356_22470 0.53 -0.9 5,021,415 - AO356_22470 0.54 +0.4 5,021,452 - AO356_22470 0.56 -0.2 5,021,452 - AO356_22470 0.56 +1.1 5,021,460 - AO356_22470 0.57 -1.0 5,021,460 - AO356_22470 0.57 -1.2 5,021,460 - AO356_22470 0.57 +0.3 5,021,615 - AO356_22470 0.68 -0.3 5,021,637 + AO356_22470 0.69 -0.2 5,021,638 - AO356_22470 0.70 -0.3 5,021,638 - AO356_22470 0.70 -0.5 5,021,810 + AO356_22470 0.82 -1.0 5,021,810 + AO356_22470 0.82 -0.7 5,021,830 + AO356_22470 0.83 +0.5 5,021,857 + AO356_22470 0.85 -0.8 5,021,858 - AO356_22470 0.85 +0.2 5,021,858 - AO356_22470 0.85 -0.6 5,021,859 + AO356_22470 0.85 +0.1 5,021,859 + AO356_22470 0.85 -1.5 5,021,859 + AO356_22470 0.85 +0.4 5,021,860 - AO356_22470 0.85 +0.4 5,021,872 + AO356_22470 0.86 -1.2 5,021,872 + AO356_22470 0.86 +0.5 5,021,872 + AO356_22470 0.86 +0.2 5,021,872 + AO356_22470 0.86 -1.2 5,022,029 + -0.3 5,022,036 + +0.3 5,022,053 - -0.4 5,022,059 + +0.8 5,022,059 + +0.3 5,022,060 - -0.9 5,022,092 + +0.0 5,022,093 - -0.4 5,022,093 - +0.1 5,022,097 - -0.0 5,022,117 + +0.9 5,022,118 - -1.7 5,022,118 - -2.0 5,022,134 + -1.1 5,022,139 - +0.5 5,022,139 - -0.0 5,022,163 - -0.6 5,022,227 + +0.9 5,022,227 + -0.7 5,022,235 + -0.1 5,022,235 + +0.4 5,022,235 + -0.2 5,022,236 - -0.7 5,022,236 - -0.3 5,022,244 + -1.3 5,022,245 - +0.3 5,022,250 + -0.7 5,022,251 - -0.9 5,022,401 + AO356_22475 0.21 -0.5 5,022,421 + AO356_22475 0.23 -1.1 5,022,421 + AO356_22475 0.23 -2.3 5,022,421 + AO356_22475 0.23 +0.0 5,022,474 + AO356_22475 0.26 -0.6 5,022,474 + AO356_22475 0.26 -2.5 5,022,474 + AO356_22475 0.26 +1.4 5,022,474 + AO356_22475 0.26 -0.2 5,022,475 - AO356_22475 0.27 +0.1 5,022,475 - AO356_22475 0.27 +1.4 5,022,475 - AO356_22475 0.27 +0.6 5,022,479 - AO356_22475 0.27 +0.2 5,022,479 - AO356_22475 0.27 -1.5 5,022,488 + AO356_22475 0.28 +0.3 5,022,488 + AO356_22475 0.28 +0.6 5,022,489 - AO356_22475 0.28 -0.9 5,022,557 - AO356_22475 0.33 +1.2 5,022,557 - AO356_22475 0.33 -1.6 5,022,557 - AO356_22475 0.33 -0.3 5,022,578 + AO356_22475 0.34 +0.2 5,022,578 + AO356_22475 0.34 +0.2 5,022,579 - AO356_22475 0.34 +1.3 5,022,579 - AO356_22475 0.34 -0.4 5,022,579 - AO356_22475 0.34 +0.7 5,022,613 + AO356_22475 0.37 +0.8 5,022,613 + AO356_22475 0.37 -1.6 5,022,614 - AO356_22475 0.37 -1.2 5,022,689 + AO356_22475 0.42 +0.2 5,022,689 + AO356_22475 0.42 -0.1 5,022,689 + AO356_22475 0.42 +0.7 5,022,689 + AO356_22475 0.42 +0.5 5,022,709 + AO356_22475 0.44 -1.5 5,022,710 - AO356_22475 0.44 +0.6 5,022,710 - AO356_22475 0.44 -1.7 5,022,711 + AO356_22475 0.44 +0.4 5,022,711 + AO356_22475 0.44 +0.1 5,022,712 - AO356_22475 0.44 +0.1 5,022,877 + AO356_22475 0.56 +0.4 5,022,877 + AO356_22475 0.56 +0.5 5,022,877 + AO356_22475 0.56 -0.3 5,022,878 - AO356_22475 0.57 +0.0 5,022,878 - AO356_22475 0.57 -0.1 5,022,878 - AO356_22475 0.57 +0.2 5,022,882 + AO356_22475 0.57 -0.7 5,022,882 + AO356_22475 0.57 -0.6 5,022,883 - AO356_22475 0.57 +0.3 5,022,890 + AO356_22475 0.57 -0.3 5,022,962 - AO356_22475 0.63 -0.3 5,022,962 - AO356_22475 0.63 -0.3 5,023,016 + AO356_22475 0.67 +0.7 5,023,016 + AO356_22475 0.67 -0.2 5,023,016 + AO356_22475 0.67 -0.6 5,023,016 + AO356_22475 0.67 -1.6 5,023,016 + AO356_22475 0.67 -0.5 5,023,016 + AO356_22475 0.67 -0.6 5,023,016 + AO356_22475 0.67 +0.3 5,023,017 - AO356_22475 0.67 +0.6 5,023,017 - AO356_22475 0.67 -0.1 5,023,017 - AO356_22475 0.67 +0.1 5,023,017 - AO356_22475 0.67 +0.4 5,023,017 - AO356_22475 0.67 -1.1 5,023,020 + AO356_22475 0.67 -0.3 5,023,020 + AO356_22475 0.67 +0.3 5,023,020 + AO356_22475 0.67 -0.1 5,023,021 - AO356_22475 0.67 +0.5 5,023,021 - AO356_22475 0.67 -1.9 5,023,038 - AO356_22475 0.68 +0.1 5,023,038 - AO356_22475 0.68 +0.4 5,023,143 - AO356_22475 0.76 -0.4 5,023,143 - AO356_22475 0.76 -0.3 5,023,164 - AO356_22475 0.78 -0.2 5,023,213 + AO356_22475 0.81 -0.3 5,023,213 + AO356_22475 0.81 +0.7 5,023,213 + AO356_22475 0.81 +1.0 5,023,214 - AO356_22475 0.82 +0.1 5,023,214 - AO356_22475 0.82 +0.4 5,023,214 - AO356_22475 0.82 +0.5 5,023,351 + -0.8 5,023,364 - -0.5 5,023,364 - +0.3 5,023,379 - +0.2 5,023,417 + +0.1 5,023,417 + +0.2 5,023,418 - -0.1 5,023,418 - -0.5 5,023,460 - -0.9 5,023,460 - +0.4 5,023,533 + +1.3 5,023,533 + +0.4 5,023,534 - +0.3 5,023,589 + -0.3 5,023,589 + -2.0 5,023,589 + +0.3 5,023,589 + -1.3 5,023,589 + +0.5 5,023,589 + +0.1 5,023,590 - -0.1 5,023,590 - -0.0 5,023,590 - -0.1 5,023,590 - -0.4 5,023,590 - +0.1 5,023,591 + -0.5 5,023,591 + -0.3 5,023,591 + +0.2 5,023,591 + +0.2 5,023,592 - -0.3 5,023,592 - -0.7 5,023,592 - +0.1 5,023,592 - +0.2 5,023,592 - -0.3 5,023,592 - -0.5 5,023,619 + +0.7 5,023,619 + -1.1 5,023,619 + +0.1 5,023,619 + +0.5 5,023,619 + +0.7 5,023,620 - +0.4 5,023,620 - -0.7 5,023,620 - -0.8 5,023,632 + +0.9 5,023,632 + -0.2 5,023,633 - +0.7 5,023,633 - -0.5 5,023,652 + +0.1 5,023,652 + -0.4 5,023,734 + -0.2 5,023,735 - +1.0 5,023,796 + -1.2 5,023,797 - +1.3 5,023,869 - AO356_22480 0.14 -0.8 5,023,869 - AO356_22480 0.14 -0.8 5,024,237 + AO356_22480 0.37 -0.3 5,024,285 + AO356_22480 0.40 +0.4 5,024,285 - AO356_22480 0.40 -0.3 5,024,296 - AO356_22480 0.41 +0.5 5,024,296 - AO356_22480 0.41 +0.6
Or see this region's nucleotide sequence