Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22365 and AO356_22370 overlap by 8 nucleotides AO356_22370 and AO356_22375 are separated by 153 nucleotides
AO356_22365: AO356_22365 - ABC transporter, at 5,000,568 to 5,001,356
_22365
AO356_22370: AO356_22370 - hypothetical protein, at 5,001,349 to 5,001,585
_22370
AO356_22375: AO356_22375 - Mn2+/Fe2+ transporter, at 5,001,739 to 5,003,040
_22375
Position (kb)
5001
5002 Strain fitness (log2 ratio)
-1
0
1
2 at 5000.567 kb on + strand at 5000.567 kb on + strand at 5000.567 kb on + strand at 5000.568 kb on - strand at 5000.568 kb on - strand at 5000.568 kb on - strand at 5000.620 kb on + strand at 5000.652 kb on - strand, within AO356_22365 at 5000.692 kb on - strand, within AO356_22365 at 5000.692 kb on - strand, within AO356_22365 at 5000.701 kb on - strand, within AO356_22365 at 5000.731 kb on + strand, within AO356_22365 at 5000.761 kb on - strand, within AO356_22365 at 5000.788 kb on - strand, within AO356_22365 at 5000.788 kb on - strand, within AO356_22365 at 5000.788 kb on - strand, within AO356_22365 at 5001.235 kb on - strand, within AO356_22365 at 5001.238 kb on - strand, within AO356_22365 at 5001.238 kb on - strand, within AO356_22365 at 5001.238 kb on - strand, within AO356_22365 at 5001.355 kb on - strand at 5001.404 kb on + strand, within AO356_22370 at 5001.404 kb on + strand, within AO356_22370 at 5001.404 kb on + strand, within AO356_22370 at 5001.404 kb on + strand, within AO356_22370 at 5001.404 kb on + strand, within AO356_22370 at 5001.405 kb on - strand, within AO356_22370 at 5001.405 kb on - strand, within AO356_22370 at 5001.470 kb on - strand, within AO356_22370 at 5001.470 kb on - strand, within AO356_22370 at 5001.470 kb on - strand, within AO356_22370 at 5001.481 kb on + strand, within AO356_22370 at 5001.583 kb on + strand at 5001.605 kb on - strand at 5001.612 kb on + strand at 5001.612 kb on + strand at 5001.613 kb on - strand at 5001.613 kb on - strand at 5001.892 kb on + strand, within AO356_22375 at 5001.892 kb on + strand, within AO356_22375 at 5001.892 kb on + strand, within AO356_22375 at 5001.892 kb on + strand, within AO356_22375 at 5001.893 kb on - strand, within AO356_22375 at 5001.893 kb on - strand, within AO356_22375 at 5001.893 kb on - strand, within AO356_22375 at 5001.940 kb on + strand, within AO356_22375 at 5001.941 kb on - strand, within AO356_22375 at 5002.051 kb on + strand, within AO356_22375 at 5002.051 kb on + strand, within AO356_22375 at 5002.051 kb on + strand, within AO356_22375 at 5002.051 kb on + strand, within AO356_22375 at 5002.052 kb on + strand, within AO356_22375 at 5002.052 kb on - strand, within AO356_22375 at 5002.084 kb on + strand, within AO356_22375 at 5002.084 kb on + strand, within AO356_22375 at 5002.194 kb on + strand, within AO356_22375 at 5002.194 kb on + strand, within AO356_22375 at 5002.195 kb on - strand, within AO356_22375 at 5002.195 kb on - strand, within AO356_22375 at 5002.195 kb on - strand, within AO356_22375 at 5002.195 kb on - strand, within AO356_22375 at 5002.198 kb on + strand, within AO356_22375 at 5002.198 kb on + strand, within AO356_22375 at 5002.198 kb on + strand, within AO356_22375 at 5002.199 kb on - strand, within AO356_22375 at 5002.199 kb on - strand, within AO356_22375 at 5002.305 kb on + strand, within AO356_22375 at 5002.306 kb on - strand, within AO356_22375 at 5002.306 kb on - strand, within AO356_22375 at 5002.414 kb on + strand, within AO356_22375 at 5002.414 kb on + strand, within AO356_22375 at 5002.414 kb on + strand, within AO356_22375 at 5002.414 kb on + strand, within AO356_22375 at 5002.414 kb on + strand, within AO356_22375 at 5002.415 kb on - strand, within AO356_22375 at 5002.458 kb on + strand, within AO356_22375 at 5002.458 kb on + strand, within AO356_22375 at 5002.459 kb on - strand, within AO356_22375 at 5002.459 kb on - strand, within AO356_22375 at 5002.459 kb on - strand, within AO356_22375
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 5,000,567 + +0.5 5,000,567 + -0.4 5,000,567 + +0.2 5,000,568 - -0.0 5,000,568 - +0.1 5,000,568 - +0.1 5,000,620 + -0.5 5,000,652 - AO356_22365 0.11 -0.6 5,000,692 - AO356_22365 0.16 -0.0 5,000,692 - AO356_22365 0.16 +0.1 5,000,701 - AO356_22365 0.17 -1.7 5,000,731 + AO356_22365 0.21 +0.9 5,000,761 - AO356_22365 0.24 +0.9 5,000,788 - AO356_22365 0.28 +0.4 5,000,788 - AO356_22365 0.28 -0.3 5,000,788 - AO356_22365 0.28 +1.0 5,001,235 - AO356_22365 0.85 +0.2 5,001,238 - AO356_22365 0.85 +0.3 5,001,238 - AO356_22365 0.85 +0.8 5,001,238 - AO356_22365 0.85 +0.1 5,001,355 - -0.3 5,001,404 + AO356_22370 0.23 +1.4 5,001,404 + AO356_22370 0.23 +0.5 5,001,404 + AO356_22370 0.23 -0.5 5,001,404 + AO356_22370 0.23 +1.3 5,001,404 + AO356_22370 0.23 +0.1 5,001,405 - AO356_22370 0.24 -0.3 5,001,405 - AO356_22370 0.24 +0.3 5,001,470 - AO356_22370 0.51 +1.9 5,001,470 - AO356_22370 0.51 +0.2 5,001,470 - AO356_22370 0.51 +0.4 5,001,481 + AO356_22370 0.56 +0.8 5,001,583 + +0.7 5,001,605 - -0.4 5,001,612 + -0.7 5,001,612 + +1.5 5,001,613 - -0.6 5,001,613 - -1.0 5,001,892 + AO356_22375 0.12 -0.0 5,001,892 + AO356_22375 0.12 +0.2 5,001,892 + AO356_22375 0.12 -0.5 5,001,892 + AO356_22375 0.12 +0.2 5,001,893 - AO356_22375 0.12 -1.3 5,001,893 - AO356_22375 0.12 +0.6 5,001,893 - AO356_22375 0.12 -0.5 5,001,940 + AO356_22375 0.15 +0.1 5,001,941 - AO356_22375 0.16 +0.5 5,002,051 + AO356_22375 0.24 -0.5 5,002,051 + AO356_22375 0.24 -0.4 5,002,051 + AO356_22375 0.24 +0.0 5,002,051 + AO356_22375 0.24 -0.2 5,002,052 + AO356_22375 0.24 +0.5 5,002,052 - AO356_22375 0.24 -1.0 5,002,084 + AO356_22375 0.26 +0.3 5,002,084 + AO356_22375 0.26 +0.4 5,002,194 + AO356_22375 0.35 +0.2 5,002,194 + AO356_22375 0.35 +0.3 5,002,195 - AO356_22375 0.35 +0.6 5,002,195 - AO356_22375 0.35 -0.1 5,002,195 - AO356_22375 0.35 +0.2 5,002,195 - AO356_22375 0.35 -0.5 5,002,198 + AO356_22375 0.35 +0.2 5,002,198 + AO356_22375 0.35 +0.4 5,002,198 + AO356_22375 0.35 -0.7 5,002,199 - AO356_22375 0.35 +0.7 5,002,199 - AO356_22375 0.35 +0.5 5,002,305 + AO356_22375 0.43 -0.3 5,002,306 - AO356_22375 0.44 -0.1 5,002,306 - AO356_22375 0.44 -0.3 5,002,414 + AO356_22375 0.52 -0.4 5,002,414 + AO356_22375 0.52 +0.1 5,002,414 + AO356_22375 0.52 +0.8 5,002,414 + AO356_22375 0.52 +0.1 5,002,414 + AO356_22375 0.52 +0.5 5,002,415 - AO356_22375 0.52 +0.7 5,002,458 + AO356_22375 0.55 -0.7 5,002,458 + AO356_22375 0.55 -1.0 5,002,459 - AO356_22375 0.55 +1.1 5,002,459 - AO356_22375 0.55 +1.0 5,002,459 - AO356_22375 0.55 +0.8
Or see this region's nucleotide sequence