Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_22085 and AO356_22090 are separated by 242 nucleotides AO356_22090 and AO356_22095 overlap by 8 nucleotides AO356_22095 and AO356_22100 are separated by 84 nucleotides
AO356_22085: AO356_22085 - secretin, at 4,944,575 to 4,945,336
_22085
AO356_22090: AO356_22090 - GNAT family acetyltransferase, at 4,945,579 to 4,946,004
_22090
AO356_22095: AO356_22095 - cupin, at 4,945,997 to 4,947,163
_22095
AO356_22100: AO356_22100 - adenylosuccinate lyase, at 4,947,248 to 4,948,618
_22100
Position (kb)
4945
4946
4947
4948 Strain fitness (log2 ratio)
-1
0
1
2 at 4945.042 kb on - strand, within AO356_22085 at 4945.251 kb on + strand, within AO356_22085 at 4945.251 kb on + strand, within AO356_22085 at 4945.252 kb on - strand, within AO356_22085 at 4945.328 kb on + strand at 4945.328 kb on + strand at 4945.328 kb on + strand at 4945.329 kb on - strand at 4945.366 kb on + strand at 4945.366 kb on + strand at 4945.407 kb on + strand at 4945.408 kb on - strand at 4945.408 kb on - strand at 4945.408 kb on - strand at 4945.408 kb on - strand at 4945.408 kb on - strand at 4945.509 kb on + strand at 4945.509 kb on + strand at 4945.510 kb on - strand at 4945.510 kb on - strand at 4945.664 kb on + strand, within AO356_22090 at 4945.664 kb on + strand, within AO356_22090 at 4945.665 kb on - strand, within AO356_22090 at 4945.931 kb on - strand, within AO356_22090 at 4945.931 kb on - strand, within AO356_22090 at 4945.931 kb on - strand, within AO356_22090 at 4945.931 kb on - strand, within AO356_22090 at 4945.999 kb on - strand at 4946.152 kb on - strand, within AO356_22095 at 4946.288 kb on + strand, within AO356_22095 at 4946.451 kb on + strand, within AO356_22095 at 4946.452 kb on - strand, within AO356_22095 at 4946.542 kb on - strand, within AO356_22095 at 4946.595 kb on + strand, within AO356_22095 at 4946.596 kb on - strand, within AO356_22095 at 4946.596 kb on - strand, within AO356_22095 at 4946.751 kb on + strand, within AO356_22095 at 4946.751 kb on + strand, within AO356_22095 at 4946.751 kb on + strand, within AO356_22095 at 4946.751 kb on + strand, within AO356_22095 at 4946.751 kb on + strand, within AO356_22095 at 4946.751 kb on + strand, within AO356_22095 at 4946.751 kb on + strand, within AO356_22095 at 4946.752 kb on - strand, within AO356_22095 at 4946.752 kb on - strand, within AO356_22095 at 4946.752 kb on - strand, within AO356_22095 at 4946.752 kb on - strand, within AO356_22095 at 4946.752 kb on - strand, within AO356_22095 at 4946.752 kb on - strand, within AO356_22095 at 4946.752 kb on - strand, within AO356_22095 at 4946.756 kb on - strand, within AO356_22095 at 4947.236 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,945,042 - AO356_22085 0.61 +0.4 4,945,251 + AO356_22085 0.89 +0.3 4,945,251 + AO356_22085 0.89 +0.7 4,945,252 - AO356_22085 0.89 -0.5 4,945,328 + -1.2 4,945,328 + -0.1 4,945,328 + +0.0 4,945,329 - +0.2 4,945,366 + -0.3 4,945,366 + -0.1 4,945,407 + -0.2 4,945,408 - +0.8 4,945,408 - +0.1 4,945,408 - -0.5 4,945,408 - -0.6 4,945,408 - +0.1 4,945,509 + +0.0 4,945,509 + -0.6 4,945,510 - +0.5 4,945,510 - -1.0 4,945,664 + AO356_22090 0.20 +1.5 4,945,664 + AO356_22090 0.20 +0.4 4,945,665 - AO356_22090 0.20 -0.0 4,945,931 - AO356_22090 0.83 +0.8 4,945,931 - AO356_22090 0.83 -0.4 4,945,931 - AO356_22090 0.83 +0.9 4,945,931 - AO356_22090 0.83 +0.4 4,945,999 - -0.7 4,946,152 - AO356_22095 0.13 +2.2 4,946,288 + AO356_22095 0.25 +1.1 4,946,451 + AO356_22095 0.39 +0.7 4,946,452 - AO356_22095 0.39 +0.9 4,946,542 - AO356_22095 0.47 +1.2 4,946,595 + AO356_22095 0.51 +2.4 4,946,596 - AO356_22095 0.51 -0.3 4,946,596 - AO356_22095 0.51 +2.5 4,946,751 + AO356_22095 0.65 +1.0 4,946,751 + AO356_22095 0.65 +1.0 4,946,751 + AO356_22095 0.65 +1.3 4,946,751 + AO356_22095 0.65 +1.8 4,946,751 + AO356_22095 0.65 +2.2 4,946,751 + AO356_22095 0.65 -0.3 4,946,751 + AO356_22095 0.65 +0.5 4,946,752 - AO356_22095 0.65 +1.8 4,946,752 - AO356_22095 0.65 +1.9 4,946,752 - AO356_22095 0.65 +1.7 4,946,752 - AO356_22095 0.65 +1.6 4,946,752 - AO356_22095 0.65 -0.3 4,946,752 - AO356_22095 0.65 +1.1 4,946,752 - AO356_22095 0.65 +0.1 4,946,756 - AO356_22095 0.65 +2.2 4,947,236 + -0.1
Or see this region's nucleotide sequence