Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_21305 and AO356_21310 overlap by 4 nucleotides AO356_21310 and AO356_21315 are separated by 89 nucleotides AO356_21315 and AO356_21320 are separated by 247 nucleotides AO356_21320 and AO356_21325 are separated by 235 nucleotides AO356_21325 and AO356_21330 are separated by 110 nucleotides
AO356_21305: AO356_21305 - hypothetical protein, at 4,781,105 to 4,782,166
_21305
AO356_21310: AO356_21310 - filamentous hemagglutinin, at 4,782,163 to 4,782,345
_21310
AO356_21315: AO356_21315 - hypothetical protein, at 4,782,435 to 4,782,629
_21315
AO356_21320: AO356_21320 - tRNA-Asn, at 4,782,877 to 4,782,952
_21320
AO356_21325: AO356_21325 - hypothetical protein, at 4,783,188 to 4,783,415
_21325
AO356_21330: AO356_21330 - aromatic amino acid aminotransferase, at 4,783,526 to 4,784,722
_21330
Position (kb) 4782
4783 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 4781.900 kb on + strand, within AO356_21305 at 4781.901 kb on - strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.026 kb on + strand, within AO356_21305 at 4782.027 kb on - strand, within AO356_21305 at 4782.027 kb on - strand, within AO356_21305 at 4782.027 kb on - strand, within AO356_21305 at 4782.179 kb on + strand at 4782.263 kb on + strand, within AO356_21310 at 4782.263 kb on + strand, within AO356_21310 at 4782.372 kb on + strand at 4782.416 kb on + strand at 4782.416 kb on + strand at 4782.416 kb on + strand at 4782.417 kb on - strand at 4782.417 kb on - strand at 4782.417 kb on - strand at 4782.567 kb on + strand, within AO356_21315 at 4782.567 kb on + strand, within AO356_21315 at 4782.567 kb on + strand, within AO356_21315 at 4782.568 kb on - strand, within AO356_21315 at 4782.568 kb on - strand, within AO356_21315 at 4782.568 kb on - strand, within AO356_21315 at 4782.568 kb on - strand, within AO356_21315 at 4782.568 kb on - strand, within AO356_21315 at 4782.574 kb on + strand, within AO356_21315 at 4782.575 kb on - strand, within AO356_21315 at 4782.575 kb on - strand, within AO356_21315 at 4782.575 kb on - strand, within AO356_21315 at 4782.629 kb on + strand at 4782.629 kb on + strand at 4782.629 kb on + strand at 4782.630 kb on - strand at 4782.630 kb on - strand at 4782.630 kb on - strand at 4782.747 kb on - strand at 4782.747 kb on - strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.798 kb on + strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.799 kb on - strand at 4782.800 kb on + strand at 4782.800 kb on + strand at 4782.800 kb on + strand at 4782.800 kb on + strand at 4782.801 kb on - strand at 4782.933 kb on - strand, within AO356_21320 at 4783.130 kb on + strand at 4783.130 kb on + strand at 4783.131 kb on - strand at 4783.131 kb on - strand at 4783.245 kb on + strand, within AO356_21325 at 4783.245 kb on + strand, within AO356_21325 at 4783.332 kb on - strand, within AO356_21325 at 4783.332 kb on - strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.368 kb on + strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.369 kb on - strand, within AO356_21325 at 4783.377 kb on + strand, within AO356_21325 at 4783.377 kb on + strand, within AO356_21325 at 4783.377 kb on + strand, within AO356_21325 at 4783.378 kb on - strand, within AO356_21325 at 4783.378 kb on - strand, within AO356_21325 at 4783.413 kb on + strand at 4783.413 kb on + strand at 4783.413 kb on + strand at 4783.414 kb on - strand at 4783.414 kb on - strand at 4783.543 kb on + strand at 4783.544 kb on - strand at 4783.614 kb on + strand at 4783.614 kb on + strand at 4783.614 kb on + strand at 4783.614 kb on + strand at 4783.614 kb on + strand at 4783.615 kb on - strand at 4783.615 kb on - strand at 4783.615 kb on - strand at 4783.615 kb on - strand at 4783.615 kb on - strand at 4783.668 kb on + strand, within AO356_21330 at 4783.669 kb on - strand, within AO356_21330 at 4783.869 kb on + strand, within AO356_21330 at 4783.869 kb on + strand, within AO356_21330 at 4783.869 kb on + strand, within AO356_21330
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,781,900 + AO356_21305 0.75 -0.4 4,781,901 - AO356_21305 0.75 -0.5 4,782,026 + AO356_21305 0.87 -0.1 4,782,026 + AO356_21305 0.87 -0.4 4,782,026 + AO356_21305 0.87 +0.6 4,782,026 + AO356_21305 0.87 +0.4 4,782,026 + AO356_21305 0.87 +1.8 4,782,026 + AO356_21305 0.87 +0.6 4,782,026 + AO356_21305 0.87 +0.5 4,782,026 + AO356_21305 0.87 +0.4 4,782,026 + AO356_21305 0.87 -0.7 4,782,026 + AO356_21305 0.87 +0.9 4,782,027 - AO356_21305 0.87 +0.2 4,782,027 - AO356_21305 0.87 -0.4 4,782,027 - AO356_21305 0.87 +1.4 4,782,179 + -0.9 4,782,263 + AO356_21310 0.55 -1.1 4,782,263 + AO356_21310 0.55 +0.3 4,782,372 + +0.1 4,782,416 + -1.5 4,782,416 + -0.0 4,782,416 + -0.5 4,782,417 - +1.1 4,782,417 - +0.5 4,782,417 - -1.5 4,782,567 + AO356_21315 0.68 -0.6 4,782,567 + AO356_21315 0.68 -1.1 4,782,567 + AO356_21315 0.68 +0.6 4,782,568 - AO356_21315 0.68 +0.7 4,782,568 - AO356_21315 0.68 -0.6 4,782,568 - AO356_21315 0.68 -0.5 4,782,568 - AO356_21315 0.68 +1.0 4,782,568 - AO356_21315 0.68 +0.3 4,782,574 + AO356_21315 0.71 -0.2 4,782,575 - AO356_21315 0.72 -0.4 4,782,575 - AO356_21315 0.72 -0.1 4,782,575 - AO356_21315 0.72 -0.5 4,782,629 + -0.7 4,782,629 + +0.1 4,782,629 + +2.0 4,782,630 - +1.9 4,782,630 - -0.2 4,782,630 - -0.1 4,782,747 - -0.2 4,782,747 - -0.1 4,782,798 + +0.3 4,782,798 + -0.5 4,782,798 + +0.2 4,782,798 + -0.9 4,782,798 + +0.1 4,782,798 + -0.8 4,782,798 + +0.2 4,782,798 + -0.7 4,782,798 + +1.5 4,782,798 + -0.9 4,782,798 + -0.7 4,782,798 + -2.8 4,782,798 + -0.1 4,782,798 + -1.0 4,782,798 + -1.1 4,782,799 - -0.4 4,782,799 - +0.7 4,782,799 - -0.1 4,782,799 - +1.5 4,782,799 - +0.4 4,782,799 - +0.7 4,782,799 - +0.2 4,782,799 - +0.7 4,782,799 - +0.6 4,782,799 - -0.6 4,782,799 - +0.0 4,782,799 - +0.3 4,782,799 - +0.6 4,782,799 - +0.1 4,782,799 - +0.3 4,782,799 - +0.9 4,782,799 - +0.4 4,782,799 - +0.8 4,782,800 + -0.3 4,782,800 + +0.1 4,782,800 + +0.1 4,782,800 + +0.2 4,782,801 - +0.8 4,782,933 - AO356_21320 0.74 +0.7 4,783,130 + -0.9 4,783,130 + +0.6 4,783,131 - +0.1 4,783,131 - +1.6 4,783,245 + AO356_21325 0.25 +0.5 4,783,245 + AO356_21325 0.25 -0.0 4,783,332 - AO356_21325 0.63 -0.5 4,783,332 - AO356_21325 0.63 -0.5 4,783,368 + AO356_21325 0.79 +0.3 4,783,368 + AO356_21325 0.79 -0.1 4,783,368 + AO356_21325 0.79 -0.6 4,783,368 + AO356_21325 0.79 -0.4 4,783,368 + AO356_21325 0.79 -1.6 4,783,368 + AO356_21325 0.79 +0.8 4,783,368 + AO356_21325 0.79 -0.1 4,783,368 + AO356_21325 0.79 -0.9 4,783,368 + AO356_21325 0.79 +0.2 4,783,368 + AO356_21325 0.79 +0.1 4,783,369 - AO356_21325 0.79 +0.2 4,783,369 - AO356_21325 0.79 +0.4 4,783,369 - AO356_21325 0.79 -0.9 4,783,369 - AO356_21325 0.79 +1.3 4,783,369 - AO356_21325 0.79 -0.0 4,783,369 - AO356_21325 0.79 +0.2 4,783,369 - AO356_21325 0.79 -0.7 4,783,369 - AO356_21325 0.79 +0.2 4,783,369 - AO356_21325 0.79 +0.8 4,783,369 - AO356_21325 0.79 -0.0 4,783,369 - AO356_21325 0.79 -0.4 4,783,369 - AO356_21325 0.79 -0.0 4,783,369 - AO356_21325 0.79 -2.1 4,783,377 + AO356_21325 0.83 +0.3 4,783,377 + AO356_21325 0.83 -0.7 4,783,377 + AO356_21325 0.83 -0.9 4,783,378 - AO356_21325 0.83 -0.6 4,783,378 - AO356_21325 0.83 +0.0 4,783,413 + -0.5 4,783,413 + -0.2 4,783,413 + -0.2 4,783,414 - -0.2 4,783,414 - -0.3 4,783,543 + +0.0 4,783,544 - +0.6 4,783,614 + -1.3 4,783,614 + -0.6 4,783,614 + -0.1 4,783,614 + -0.4 4,783,614 + +0.7 4,783,615 - -0.7 4,783,615 - -0.2 4,783,615 - +0.6 4,783,615 - -0.2 4,783,615 - -0.1 4,783,668 + AO356_21330 0.12 +0.2 4,783,669 - AO356_21330 0.12 -0.5 4,783,869 + AO356_21330 0.29 +0.5 4,783,869 + AO356_21330 0.29 +0.8 4,783,869 + AO356_21330 0.29 +1.4
Or see this region's nucleotide sequence