Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_21095
Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Thallium(I) acetate 0.008 mg/ml |
---|---|---|---|---|---|
remove | |||||
4,693,641 | + | -0.0 | |||
4,693,641 | + | -0.2 | |||
4,693,642 | - | -0.2 | |||
4,693,648 | + | -0.3 | |||
4,693,648 | + | +0.7 | |||
4,693,796 | + | AO356_21090 | 0.12 | -0.5 | |
4,693,797 | - | AO356_21090 | 0.12 | -0.3 | |
4,693,914 | - | AO356_21090 | 0.27 | -1.4 | |
4,693,914 | - | AO356_21090 | 0.27 | -0.1 | |
4,693,965 | - | AO356_21090 | 0.34 | +0.1 | |
4,693,965 | - | AO356_21090 | 0.34 | +0.4 | |
4,693,967 | + | AO356_21090 | 0.34 | -0.5 | |
4,693,968 | - | AO356_21090 | 0.34 | -0.4 | |
4,693,968 | - | AO356_21090 | 0.34 | +0.2 | |
4,693,968 | - | AO356_21090 | 0.34 | -0.7 | |
4,694,430 | + | +3.2 | |||
4,694,430 | + | -0.1 | |||
4,694,430 | + | -0.6 | |||
4,694,430 | + | +1.0 | |||
4,694,430 | + | +0.0 | |||
4,694,453 | + | -0.5 | |||
4,694,453 | + | -0.4 | |||
4,694,453 | + | +0.6 | |||
4,694,454 | - | +0.7 | |||
4,694,454 | - | +0.4 | |||
4,694,454 | - | -0.8 | |||
4,694,515 | + | -0.4 | |||
4,694,516 | - | -0.4 | |||
4,694,516 | - | +1.0 | |||
4,694,517 | + | +0.3 | |||
4,694,518 | - | -0.1 | |||
4,694,547 | + | -0.0 | |||
4,694,574 | - | -0.9 | |||
4,694,808 | + | AO356_21095 | 0.26 | -1.0 | |
4,695,804 | + | +0.6 | |||
4,695,804 | + | +0.5 | |||
4,695,858 | + | +0.9 | |||
4,695,858 | + | -0.5 | |||
4,695,859 | - | -1.6 | |||
4,696,222 | + | -1.1 | |||
4,696,223 | - | +0.1 | |||
4,696,249 | - | +0.1 |
Or see this region's nucleotide sequence