Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_20920 and AO356_20925 are separated by 219 nucleotides AO356_20925 and AO356_20930 are separated by 108 nucleotides AO356_20930 and AO356_20935 are separated by 96 nucleotides AO356_20935 and AO356_20940 are separated by 116 nucleotides AO356_20940 and AO356_20945 are separated by 103 nucleotides
AO356_20920: AO356_20920 - peptidase, at 4,659,458 to 4,660,672
_20920
AO356_20925: AO356_20925 - glyoxalase, at 4,660,892 to 4,661,350
_20925
AO356_20930: AO356_20930 - MerR family transcriptional regulator, at 4,661,459 to 4,661,905
_20930
AO356_20935: AO356_20935 - antibiotic biosynthesis monooxygenase, at 4,662,002 to 4,662,367
_20935
AO356_20940: AO356_20940 - hypothetical protein, at 4,662,484 to 4,662,750
_20940
AO356_20945: AO356_20945 - lysine transporter LysE, at 4,662,854 to 4,663,468
_20945
Position (kb) 4661
4662 Strain fitness (log2 ratio) -1
0
1 at 4660.485 kb on + strand, within AO356_20920 at 4660.485 kb on + strand, within AO356_20920 at 4660.486 kb on - strand, within AO356_20920 at 4660.630 kb on + strand at 4660.631 kb on - strand at 4660.631 kb on - strand at 4660.631 kb on - strand at 4660.631 kb on - strand at 4660.631 kb on - strand at 4660.777 kb on + strand at 4660.777 kb on + strand at 4660.782 kb on - strand at 4660.984 kb on - strand, within AO356_20925 at 4661.016 kb on + strand, within AO356_20925 at 4661.016 kb on + strand, within AO356_20925 at 4661.097 kb on + strand, within AO356_20925 at 4661.097 kb on + strand, within AO356_20925 at 4661.097 kb on + strand, within AO356_20925 at 4661.097 kb on + strand, within AO356_20925 at 4661.098 kb on - strand, within AO356_20925 at 4661.098 kb on - strand, within AO356_20925 at 4661.098 kb on - strand, within AO356_20925 at 4661.098 kb on - strand, within AO356_20925 at 4661.098 kb on - strand, within AO356_20925 at 4661.099 kb on + strand, within AO356_20925 at 4661.099 kb on + strand, within AO356_20925 at 4661.099 kb on + strand, within AO356_20925 at 4661.099 kb on + strand, within AO356_20925 at 4661.099 kb on + strand, within AO356_20925 at 4661.099 kb on + strand, within AO356_20925 at 4661.100 kb on - strand, within AO356_20925 at 4661.100 kb on - strand, within AO356_20925 at 4661.100 kb on - strand, within AO356_20925 at 4661.100 kb on - strand, within AO356_20925 at 4661.100 kb on - strand, within AO356_20925 at 4661.100 kb on - strand, within AO356_20925 at 4661.100 kb on - strand, within AO356_20925 at 4661.265 kb on + strand, within AO356_20925 at 4661.304 kb on + strand, within AO356_20925 at 4661.304 kb on + strand, within AO356_20925 at 4661.304 kb on + strand, within AO356_20925 at 4661.317 kb on + strand at 4661.368 kb on - strand at 4661.409 kb on + strand at 4661.410 kb on - strand at 4661.410 kb on - strand at 4661.411 kb on + strand at 4661.411 kb on + strand at 4661.412 kb on - strand at 4661.412 kb on - strand at 4661.412 kb on - strand at 4661.460 kb on + strand at 4661.460 kb on + strand at 4661.461 kb on - strand at 4661.821 kb on - strand, within AO356_20930 at 4661.821 kb on - strand, within AO356_20930 at 4661.821 kb on - strand, within AO356_20930 at 4661.947 kb on + strand at 4661.990 kb on - strand at 4662.145 kb on + strand, within AO356_20935 at 4662.182 kb on + strand, within AO356_20935 at 4662.182 kb on + strand, within AO356_20935 at 4662.182 kb on + strand, within AO356_20935 at 4662.366 kb on - strand at 4662.394 kb on + strand at 4662.458 kb on + strand at 4662.492 kb on + strand at 4662.568 kb on + strand, within AO356_20940 at 4662.568 kb on + strand, within AO356_20940 at 4662.638 kb on - strand, within AO356_20940 at 4662.638 kb on - strand, within AO356_20940
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,660,485 + AO356_20920 0.85 +0.0 4,660,485 + AO356_20920 0.85 -0.6 4,660,486 - AO356_20920 0.85 +0.4 4,660,630 + -0.3 4,660,631 - -1.6 4,660,631 - +0.2 4,660,631 - -0.5 4,660,631 - -0.4 4,660,631 - -0.0 4,660,777 + -1.0 4,660,777 + -0.8 4,660,782 - +0.8 4,660,984 - AO356_20925 0.20 -1.3 4,661,016 + AO356_20925 0.27 -0.1 4,661,016 + AO356_20925 0.27 -0.7 4,661,097 + AO356_20925 0.45 +0.0 4,661,097 + AO356_20925 0.45 -0.1 4,661,097 + AO356_20925 0.45 -0.0 4,661,097 + AO356_20925 0.45 -1.4 4,661,098 - AO356_20925 0.45 -0.1 4,661,098 - AO356_20925 0.45 -0.1 4,661,098 - AO356_20925 0.45 +0.1 4,661,098 - AO356_20925 0.45 -0.3 4,661,098 - AO356_20925 0.45 +1.1 4,661,099 + AO356_20925 0.45 +0.6 4,661,099 + AO356_20925 0.45 -0.3 4,661,099 + AO356_20925 0.45 -0.3 4,661,099 + AO356_20925 0.45 -0.3 4,661,099 + AO356_20925 0.45 +0.9 4,661,099 + AO356_20925 0.45 +0.3 4,661,100 - AO356_20925 0.45 +0.5 4,661,100 - AO356_20925 0.45 +0.5 4,661,100 - AO356_20925 0.45 +0.4 4,661,100 - AO356_20925 0.45 -0.1 4,661,100 - AO356_20925 0.45 +0.2 4,661,100 - AO356_20925 0.45 -0.1 4,661,100 - AO356_20925 0.45 -0.8 4,661,265 + AO356_20925 0.81 -0.4 4,661,304 + AO356_20925 0.90 +0.3 4,661,304 + AO356_20925 0.90 -0.0 4,661,304 + AO356_20925 0.90 -0.2 4,661,317 + +1.0 4,661,368 - +1.0 4,661,409 + +0.5 4,661,410 - -1.3 4,661,410 - -0.2 4,661,411 + -0.9 4,661,411 + -0.9 4,661,412 - +0.6 4,661,412 - +0.6 4,661,412 - +0.2 4,661,460 + +0.5 4,661,460 + +0.5 4,661,461 - -0.4 4,661,821 - AO356_20930 0.81 -0.4 4,661,821 - AO356_20930 0.81 -1.0 4,661,821 - AO356_20930 0.81 -0.5 4,661,947 + +0.1 4,661,990 - +0.6 4,662,145 + AO356_20935 0.39 +0.3 4,662,182 + AO356_20935 0.49 -0.0 4,662,182 + AO356_20935 0.49 +0.0 4,662,182 + AO356_20935 0.49 -0.6 4,662,366 - +0.9 4,662,394 + -0.4 4,662,458 + +0.2 4,662,492 + +0.3 4,662,568 + AO356_20940 0.31 -0.4 4,662,568 + AO356_20940 0.31 -0.9 4,662,638 - AO356_20940 0.58 +0.2 4,662,638 - AO356_20940 0.58 -1.1
Or see this region's nucleotide sequence