Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19505 and AO356_19510 are separated by 77 nucleotides AO356_19510 and AO356_19515 are separated by 73 nucleotides AO356_19515 and AO356_19520 are separated by 130 nucleotides AO356_19520 and AO356_19525 are separated by 254 nucleotides
AO356_19505: AO356_19505 - GTP cyclohydrolase, at 4,377,363 to 4,377,908
_19505
AO356_19510: AO356_19510 - DNA mismatch repair protein MutS, at 4,377,986 to 4,378,543
_19510
AO356_19515: AO356_19515 - hypothetical protein, at 4,378,617 to 4,378,937
_19515
AO356_19520: AO356_19520 - isochorismatase, at 4,379,068 to 4,379,658
_19520
AO356_19525: AO356_19525 - protein-(glutamine-N5) methyltransferase, ribosomal protein L3-specific, at 4,379,913 to 4,380,821
_19525
Position (kb)
4378
4379 Strain fitness (log2 ratio)
-1
0
1
2
3 at 4377.987 kb on + strand at 4378.029 kb on + strand at 4378.192 kb on + strand, within AO356_19510 at 4378.193 kb on - strand, within AO356_19510 at 4378.497 kb on - strand at 4378.497 kb on - strand at 4378.717 kb on - strand, within AO356_19515 at 4378.717 kb on - strand, within AO356_19515 at 4378.979 kb on + strand at 4378.979 kb on + strand at 4379.168 kb on + strand, within AO356_19520 at 4379.168 kb on + strand, within AO356_19520 at 4379.168 kb on + strand, within AO356_19520 at 4379.168 kb on + strand, within AO356_19520 at 4379.169 kb on - strand, within AO356_19520 at 4379.169 kb on - strand, within AO356_19520 at 4379.169 kb on - strand, within AO356_19520 at 4379.559 kb on - strand, within AO356_19520 at 4379.616 kb on - strand at 4379.753 kb on + strand at 4379.753 kb on + strand at 4379.785 kb on + strand at 4379.785 kb on + strand at 4379.785 kb on + strand at 4379.785 kb on + strand at 4379.785 kb on + strand at 4379.786 kb on - strand at 4379.786 kb on - strand at 4379.786 kb on - strand at 4379.786 kb on - strand at 4379.786 kb on - strand at 4379.786 kb on - strand at 4379.786 kb on - strand at 4379.786 kb on - strand at 4379.806 kb on - strand at 4379.878 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,377,987 + -1.3 4,378,029 + -0.5 4,378,192 + AO356_19510 0.37 +0.1 4,378,193 - AO356_19510 0.37 -0.3 4,378,497 - +0.2 4,378,497 - +0.3 4,378,717 - AO356_19515 0.31 +0.5 4,378,717 - AO356_19515 0.31 +0.8 4,378,979 + -0.2 4,378,979 + +1.1 4,379,168 + AO356_19520 0.17 -0.3 4,379,168 + AO356_19520 0.17 -0.2 4,379,168 + AO356_19520 0.17 +0.7 4,379,168 + AO356_19520 0.17 +0.1 4,379,169 - AO356_19520 0.17 +1.4 4,379,169 - AO356_19520 0.17 +0.8 4,379,169 - AO356_19520 0.17 +1.6 4,379,559 - AO356_19520 0.83 +0.9 4,379,616 - +0.6 4,379,753 + +0.1 4,379,753 + -0.0 4,379,785 + -0.3 4,379,785 + +1.2 4,379,785 + +0.0 4,379,785 + +0.5 4,379,785 + +2.8 4,379,786 - +0.6 4,379,786 - +0.4 4,379,786 - +0.5 4,379,786 - +1.7 4,379,786 - +0.4 4,379,786 - +0.7 4,379,786 - +0.1 4,379,786 - +1.2 4,379,806 - -0.4 4,379,878 - -0.3
Or see this region's nucleotide sequence