Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_19330 and AO356_19335 are separated by 118 nucleotides AO356_19335 and AO356_19340 are separated by 106 nucleotides
AO356_19330: AO356_19330 - diguanylate phosphodiesterase, at 4,338,878 to 4,340,665
_19330
AO356_19335: AO356_19335 - peptidase S41, at 4,340,784 to 4,342,895
_19335
AO356_19340: AO356_19340 - NAD(P)H-quinone oxidoreductase, at 4,343,002 to 4,343,964
_19340
Position (kb)
4340
4341
4342
4343 Strain fitness (log2 ratio)
-1
0
1
2 at 4339.965 kb on + strand, within AO356_19330 at 4339.965 kb on + strand, within AO356_19330 at 4340.146 kb on - strand, within AO356_19330 at 4340.146 kb on - strand, within AO356_19330 at 4340.272 kb on + strand, within AO356_19330 at 4340.330 kb on + strand, within AO356_19330 at 4340.331 kb on - strand, within AO356_19330 at 4340.399 kb on + strand, within AO356_19330 at 4340.399 kb on + strand, within AO356_19330 at 4340.400 kb on - strand, within AO356_19330 at 4340.400 kb on - strand, within AO356_19330 at 4340.400 kb on - strand, within AO356_19330 at 4340.717 kb on - strand at 4340.717 kb on - strand at 4340.717 kb on - strand at 4340.717 kb on - strand at 4340.717 kb on - strand at 4340.804 kb on + strand at 4340.818 kb on + strand at 4340.851 kb on + strand at 4340.852 kb on - strand at 4340.852 kb on - strand at 4340.852 kb on - strand at 4341.264 kb on + strand, within AO356_19335 at 4341.264 kb on + strand, within AO356_19335 at 4341.265 kb on - strand, within AO356_19335 at 4341.265 kb on - strand, within AO356_19335 at 4341.302 kb on - strand, within AO356_19335 at 4341.407 kb on - strand, within AO356_19335 at 4341.484 kb on + strand, within AO356_19335 at 4341.484 kb on + strand, within AO356_19335 at 4341.484 kb on + strand, within AO356_19335 at 4341.484 kb on + strand, within AO356_19335 at 4341.484 kb on + strand, within AO356_19335 at 4341.484 kb on + strand, within AO356_19335 at 4341.485 kb on - strand, within AO356_19335 at 4341.485 kb on - strand, within AO356_19335 at 4341.537 kb on - strand, within AO356_19335 at 4341.662 kb on - strand, within AO356_19335 at 4341.700 kb on + strand, within AO356_19335 at 4341.700 kb on + strand, within AO356_19335 at 4341.700 kb on + strand, within AO356_19335 at 4341.701 kb on - strand, within AO356_19335 at 4341.739 kb on + strand, within AO356_19335 at 4341.739 kb on + strand, within AO356_19335 at 4341.772 kb on + strand, within AO356_19335 at 4341.772 kb on + strand, within AO356_19335 at 4341.773 kb on - strand, within AO356_19335 at 4341.773 kb on - strand, within AO356_19335 at 4341.773 kb on - strand, within AO356_19335 at 4342.174 kb on + strand, within AO356_19335 at 4342.174 kb on + strand, within AO356_19335 at 4342.175 kb on - strand, within AO356_19335 at 4342.175 kb on - strand, within AO356_19335 at 4342.175 kb on - strand, within AO356_19335 at 4342.175 kb on - strand, within AO356_19335 at 4342.193 kb on - strand, within AO356_19335 at 4342.216 kb on + strand, within AO356_19335 at 4342.216 kb on + strand, within AO356_19335 at 4342.216 kb on + strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.217 kb on - strand, within AO356_19335 at 4342.480 kb on + strand, within AO356_19335 at 4342.480 kb on + strand, within AO356_19335 at 4342.519 kb on + strand, within AO356_19335 at 4342.519 kb on + strand, within AO356_19335 at 4342.519 kb on + strand, within AO356_19335 at 4342.519 kb on + strand, within AO356_19335 at 4342.519 kb on + strand, within AO356_19335 at 4342.519 kb on + strand, within AO356_19335 at 4342.520 kb on - strand, within AO356_19335 at 4342.520 kb on - strand, within AO356_19335 at 4342.520 kb on - strand, within AO356_19335 at 4342.615 kb on + strand, within AO356_19335 at 4342.645 kb on + strand, within AO356_19335 at 4342.645 kb on + strand, within AO356_19335 at 4342.645 kb on + strand, within AO356_19335 at 4342.646 kb on - strand, within AO356_19335 at 4342.646 kb on - strand, within AO356_19335 at 4342.646 kb on - strand, within AO356_19335 at 4342.646 kb on - strand, within AO356_19335 at 4342.646 kb on - strand, within AO356_19335 at 4342.646 kb on - strand, within AO356_19335 at 4342.654 kb on + strand, within AO356_19335 at 4342.654 kb on + strand, within AO356_19335 at 4342.654 kb on + strand, within AO356_19335 at 4342.654 kb on + strand, within AO356_19335 at 4342.654 kb on + strand, within AO356_19335 at 4342.654 kb on + strand, within AO356_19335 at 4342.654 kb on + strand, within AO356_19335 at 4342.655 kb on - strand, within AO356_19335 at 4342.655 kb on - strand, within AO356_19335 at 4342.696 kb on + strand at 4342.696 kb on + strand at 4342.697 kb on - strand at 4342.697 kb on - strand at 4342.790 kb on + strand at 4342.791 kb on - strand at 4342.791 kb on - strand at 4342.895 kb on + strand at 4342.895 kb on + strand at 4342.895 kb on + strand at 4342.895 kb on + strand at 4342.895 kb on + strand at 4342.898 kb on + strand at 4342.898 kb on + strand at 4342.898 kb on + strand at 4342.898 kb on + strand at 4342.899 kb on - strand at 4342.899 kb on - strand at 4342.899 kb on - strand at 4342.941 kb on + strand at 4342.942 kb on - strand at 4342.942 kb on - strand at 4343.356 kb on + strand, within AO356_19340 at 4343.356 kb on + strand, within AO356_19340 at 4343.356 kb on + strand, within AO356_19340 at 4343.521 kb on + strand, within AO356_19340 at 4343.521 kb on + strand, within AO356_19340 at 4343.522 kb on - strand, within AO356_19340 at 4343.522 kb on - strand, within AO356_19340 at 4343.522 kb on - strand, within AO356_19340 at 4343.556 kb on - strand, within AO356_19340 at 4343.630 kb on - strand, within AO356_19340 at 4343.740 kb on - strand, within AO356_19340
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,339,965 + AO356_19330 0.61 +0.2 4,339,965 + AO356_19330 0.61 +0.8 4,340,146 - AO356_19330 0.71 +1.5 4,340,146 - AO356_19330 0.71 -0.1 4,340,272 + AO356_19330 0.78 +0.2 4,340,330 + AO356_19330 0.81 +0.7 4,340,331 - AO356_19330 0.81 -0.8 4,340,399 + AO356_19330 0.85 +0.5 4,340,399 + AO356_19330 0.85 -0.4 4,340,400 - AO356_19330 0.85 +0.5 4,340,400 - AO356_19330 0.85 +0.0 4,340,400 - AO356_19330 0.85 +0.9 4,340,717 - -0.1 4,340,717 - -0.2 4,340,717 - +1.0 4,340,717 - -1.0 4,340,717 - +0.8 4,340,804 + +0.7 4,340,818 + +1.4 4,340,851 + +0.4 4,340,852 - +1.0 4,340,852 - +0.7 4,340,852 - +0.8 4,341,264 + AO356_19335 0.23 +1.6 4,341,264 + AO356_19335 0.23 +2.7 4,341,265 - AO356_19335 0.23 +0.2 4,341,265 - AO356_19335 0.23 +1.1 4,341,302 - AO356_19335 0.25 -0.0 4,341,407 - AO356_19335 0.29 +2.0 4,341,484 + AO356_19335 0.33 +0.9 4,341,484 + AO356_19335 0.33 +1.1 4,341,484 + AO356_19335 0.33 +1.3 4,341,484 + AO356_19335 0.33 +1.6 4,341,484 + AO356_19335 0.33 +0.7 4,341,484 + AO356_19335 0.33 +1.6 4,341,485 - AO356_19335 0.33 +1.6 4,341,485 - AO356_19335 0.33 -0.3 4,341,537 - AO356_19335 0.36 +1.5 4,341,662 - AO356_19335 0.42 +0.3 4,341,700 + AO356_19335 0.43 +1.2 4,341,700 + AO356_19335 0.43 +1.1 4,341,700 + AO356_19335 0.43 +0.8 4,341,701 - AO356_19335 0.43 +1.7 4,341,739 + AO356_19335 0.45 +0.4 4,341,739 + AO356_19335 0.45 -0.1 4,341,772 + AO356_19335 0.47 +0.2 4,341,772 + AO356_19335 0.47 +0.6 4,341,773 - AO356_19335 0.47 +0.6 4,341,773 - AO356_19335 0.47 +2.2 4,341,773 - AO356_19335 0.47 +0.4 4,342,174 + AO356_19335 0.66 +0.2 4,342,174 + AO356_19335 0.66 +0.1 4,342,175 - AO356_19335 0.66 +1.0 4,342,175 - AO356_19335 0.66 +0.5 4,342,175 - AO356_19335 0.66 +0.1 4,342,175 - AO356_19335 0.66 +0.2 4,342,193 - AO356_19335 0.67 +0.5 4,342,216 + AO356_19335 0.68 +0.9 4,342,216 + AO356_19335 0.68 +0.9 4,342,216 + AO356_19335 0.68 +1.2 4,342,217 - AO356_19335 0.68 +1.7 4,342,217 - AO356_19335 0.68 +1.4 4,342,217 - AO356_19335 0.68 +1.4 4,342,217 - AO356_19335 0.68 +0.2 4,342,217 - AO356_19335 0.68 +0.9 4,342,217 - AO356_19335 0.68 +0.5 4,342,217 - AO356_19335 0.68 +0.7 4,342,217 - AO356_19335 0.68 +0.5 4,342,480 + AO356_19335 0.80 +0.3 4,342,480 + AO356_19335 0.80 +0.1 4,342,519 + AO356_19335 0.82 +2.0 4,342,519 + AO356_19335 0.82 +1.5 4,342,519 + AO356_19335 0.82 +0.1 4,342,519 + AO356_19335 0.82 +0.4 4,342,519 + AO356_19335 0.82 +0.3 4,342,519 + AO356_19335 0.82 +1.6 4,342,520 - AO356_19335 0.82 +0.4 4,342,520 - AO356_19335 0.82 +1.0 4,342,520 - AO356_19335 0.82 +0.8 4,342,615 + AO356_19335 0.87 +1.1 4,342,645 + AO356_19335 0.88 +1.2 4,342,645 + AO356_19335 0.88 +1.0 4,342,645 + AO356_19335 0.88 +0.8 4,342,646 - AO356_19335 0.88 +0.1 4,342,646 - AO356_19335 0.88 -0.2 4,342,646 - AO356_19335 0.88 +1.8 4,342,646 - AO356_19335 0.88 -0.7 4,342,646 - AO356_19335 0.88 +1.0 4,342,646 - AO356_19335 0.88 +0.2 4,342,654 + AO356_19335 0.89 +0.7 4,342,654 + AO356_19335 0.89 +0.8 4,342,654 + AO356_19335 0.89 +0.4 4,342,654 + AO356_19335 0.89 +0.7 4,342,654 + AO356_19335 0.89 +0.4 4,342,654 + AO356_19335 0.89 +0.4 4,342,654 + AO356_19335 0.89 +0.4 4,342,655 - AO356_19335 0.89 -0.1 4,342,655 - AO356_19335 0.89 +0.4 4,342,696 + +0.2 4,342,696 + +0.2 4,342,697 - +1.0 4,342,697 - -0.2 4,342,790 + +1.2 4,342,791 - +2.1 4,342,791 - +1.0 4,342,895 + +1.5 4,342,895 + +1.2 4,342,895 + +0.0 4,342,895 + +1.0 4,342,895 + +1.5 4,342,898 + +0.7 4,342,898 + +0.2 4,342,898 + +0.8 4,342,898 + -1.1 4,342,899 - +0.5 4,342,899 - -0.2 4,342,899 - +0.2 4,342,941 + +0.6 4,342,942 - -0.6 4,342,942 - +0.2 4,343,356 + AO356_19340 0.37 +0.2 4,343,356 + AO356_19340 0.37 +0.3 4,343,356 + AO356_19340 0.37 +0.7 4,343,521 + AO356_19340 0.54 +0.2 4,343,521 + AO356_19340 0.54 -0.1 4,343,522 - AO356_19340 0.54 +0.3 4,343,522 - AO356_19340 0.54 +0.1 4,343,522 - AO356_19340 0.54 +0.6 4,343,556 - AO356_19340 0.58 +1.2 4,343,630 - AO356_19340 0.65 -0.6 4,343,740 - AO356_19340 0.77 -0.5
Or see this region's nucleotide sequence