Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_18530 and AO356_18535 are separated by 164 nucleotides AO356_18535 and AO356_18540 overlap by 4 nucleotides
AO356_18530: AO356_18530 - L-tyrosine transporter (from data) , at 4,168,938 to 4,170,353
_18530
AO356_18535: AO356_18535 - class I peptide chain release factor, at 4,170,518 to 4,170,931
_18535
AO356_18540: AO356_18540 - MFS transporter, at 4,170,928 to 4,172,127
_18540
Position (kb)
4170
4171 Strain fitness (log2 ratio)
-1
0
1
2 at 4169.682 kb on + strand, within AO356_18530 at 4169.682 kb on + strand, within AO356_18530 at 4169.682 kb on + strand, within AO356_18530 at 4169.683 kb on - strand, within AO356_18530 at 4169.763 kb on + strand, within AO356_18530 at 4169.764 kb on - strand, within AO356_18530 at 4169.822 kb on + strand, within AO356_18530 at 4169.823 kb on - strand, within AO356_18530 at 4169.862 kb on + strand, within AO356_18530 at 4169.862 kb on + strand, within AO356_18530 at 4169.863 kb on - strand, within AO356_18530 at 4169.863 kb on - strand, within AO356_18530 at 4169.863 kb on - strand, within AO356_18530 at 4169.863 kb on - strand, within AO356_18530 at 4169.877 kb on + strand, within AO356_18530 at 4169.877 kb on + strand, within AO356_18530 at 4169.877 kb on + strand, within AO356_18530 at 4169.878 kb on - strand, within AO356_18530 at 4169.878 kb on - strand, within AO356_18530 at 4169.878 kb on - strand, within AO356_18530 at 4169.878 kb on - strand, within AO356_18530 at 4169.966 kb on - strand, within AO356_18530 at 4170.018 kb on + strand, within AO356_18530 at 4170.018 kb on + strand, within AO356_18530 at 4170.018 kb on + strand, within AO356_18530 at 4170.018 kb on + strand, within AO356_18530 at 4170.018 kb on + strand, within AO356_18530 at 4170.099 kb on + strand, within AO356_18530 at 4170.099 kb on + strand, within AO356_18530 at 4170.100 kb on - strand, within AO356_18530 at 4170.100 kb on - strand, within AO356_18530 at 4170.100 kb on - strand, within AO356_18530 at 4170.183 kb on + strand, within AO356_18530 at 4170.183 kb on + strand, within AO356_18530 at 4170.183 kb on + strand, within AO356_18530 at 4170.183 kb on + strand, within AO356_18530 at 4170.183 kb on + strand, within AO356_18530 at 4170.183 kb on + strand, within AO356_18530 at 4170.184 kb on - strand, within AO356_18530 at 4170.184 kb on - strand, within AO356_18530 at 4170.184 kb on - strand, within AO356_18530 at 4170.184 kb on - strand, within AO356_18530 at 4170.184 kb on - strand, within AO356_18530 at 4170.184 kb on - strand, within AO356_18530 at 4170.294 kb on + strand at 4170.294 kb on + strand at 4170.294 kb on + strand at 4170.295 kb on - strand at 4170.295 kb on - strand at 4170.295 kb on - strand at 4170.351 kb on + strand at 4170.351 kb on + strand at 4170.351 kb on + strand at 4170.351 kb on + strand at 4170.352 kb on - strand at 4170.352 kb on - strand at 4170.352 kb on - strand at 4170.352 kb on - strand at 4170.352 kb on - strand at 4170.405 kb on + strand at 4170.405 kb on + strand at 4170.459 kb on + strand at 4170.460 kb on - strand at 4170.671 kb on + strand, within AO356_18535 at 4170.671 kb on + strand, within AO356_18535 at 4170.672 kb on - strand, within AO356_18535 at 4170.672 kb on - strand, within AO356_18535 at 4170.747 kb on - strand, within AO356_18535 at 4170.747 kb on - strand, within AO356_18535 at 4170.977 kb on + strand at 4170.978 kb on - strand at 4170.978 kb on - strand at 4170.978 kb on - strand at 4171.110 kb on - strand, within AO356_18540 at 4171.409 kb on + strand, within AO356_18540 at 4171.409 kb on + strand, within AO356_18540 at 4171.409 kb on + strand, within AO356_18540 at 4171.410 kb on - strand, within AO356_18540 at 4171.410 kb on - strand, within AO356_18540 at 4171.410 kb on - strand, within AO356_18540 at 4171.412 kb on + strand, within AO356_18540 at 4171.413 kb on - strand, within AO356_18540 at 4171.701 kb on + strand, within AO356_18540 at 4171.928 kb on + strand, within AO356_18540 at 4171.928 kb on + strand, within AO356_18540 at 4171.929 kb on - strand, within AO356_18540
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 4,169,682 + AO356_18530 0.53 +1.8 4,169,682 + AO356_18530 0.53 +0.7 4,169,682 + AO356_18530 0.53 +1.4 4,169,683 - AO356_18530 0.53 +0.1 4,169,763 + AO356_18530 0.58 +1.1 4,169,764 - AO356_18530 0.58 +0.7 4,169,822 + AO356_18530 0.62 +0.1 4,169,823 - AO356_18530 0.62 +0.8 4,169,862 + AO356_18530 0.65 +2.0 4,169,862 + AO356_18530 0.65 +0.1 4,169,863 - AO356_18530 0.65 +0.1 4,169,863 - AO356_18530 0.65 +0.9 4,169,863 - AO356_18530 0.65 +0.6 4,169,863 - AO356_18530 0.65 +0.5 4,169,877 + AO356_18530 0.66 +0.8 4,169,877 + AO356_18530 0.66 -0.8 4,169,877 + AO356_18530 0.66 -0.2 4,169,878 - AO356_18530 0.66 +1.5 4,169,878 - AO356_18530 0.66 +2.4 4,169,878 - AO356_18530 0.66 +0.7 4,169,878 - AO356_18530 0.66 +1.2 4,169,966 - AO356_18530 0.73 +0.8 4,170,018 + AO356_18530 0.76 +0.8 4,170,018 + AO356_18530 0.76 +1.9 4,170,018 + AO356_18530 0.76 +0.7 4,170,018 + AO356_18530 0.76 +1.0 4,170,018 + AO356_18530 0.76 +0.6 4,170,099 + AO356_18530 0.82 +1.0 4,170,099 + AO356_18530 0.82 +0.5 4,170,100 - AO356_18530 0.82 +0.2 4,170,100 - AO356_18530 0.82 +0.6 4,170,100 - AO356_18530 0.82 +1.3 4,170,183 + AO356_18530 0.88 +2.2 4,170,183 + AO356_18530 0.88 -0.2 4,170,183 + AO356_18530 0.88 +0.8 4,170,183 + AO356_18530 0.88 +0.3 4,170,183 + AO356_18530 0.88 +0.7 4,170,183 + AO356_18530 0.88 +0.9 4,170,184 - AO356_18530 0.88 +0.7 4,170,184 - AO356_18530 0.88 +0.7 4,170,184 - AO356_18530 0.88 -1.3 4,170,184 - AO356_18530 0.88 +1.6 4,170,184 - AO356_18530 0.88 +0.7 4,170,184 - AO356_18530 0.88 +1.6 4,170,294 + -0.3 4,170,294 + +0.6 4,170,294 + +1.9 4,170,295 - +0.3 4,170,295 - +1.8 4,170,295 - +0.1 4,170,351 + +0.3 4,170,351 + -0.4 4,170,351 + +0.7 4,170,351 + +0.2 4,170,352 - +1.5 4,170,352 - +0.8 4,170,352 - +0.6 4,170,352 - -0.1 4,170,352 - -0.8 4,170,405 + +0.5 4,170,405 + -0.6 4,170,459 + +0.1 4,170,460 - +1.0 4,170,671 + AO356_18535 0.37 -1.3 4,170,671 + AO356_18535 0.37 -0.3 4,170,672 - AO356_18535 0.37 +0.8 4,170,672 - AO356_18535 0.37 -0.2 4,170,747 - AO356_18535 0.55 +0.8 4,170,747 - AO356_18535 0.55 +0.5 4,170,977 + -0.3 4,170,978 - +0.5 4,170,978 - -0.0 4,170,978 - -0.5 4,171,110 - AO356_18540 0.15 +0.6 4,171,409 + AO356_18540 0.40 +0.6 4,171,409 + AO356_18540 0.40 -0.1 4,171,409 + AO356_18540 0.40 +1.3 4,171,410 - AO356_18540 0.40 +0.6 4,171,410 - AO356_18540 0.40 -0.1 4,171,410 - AO356_18540 0.40 +0.5 4,171,412 + AO356_18540 0.40 +0.8 4,171,413 - AO356_18540 0.40 -0.1 4,171,701 + AO356_18540 0.64 +0.2 4,171,928 + AO356_18540 0.83 -0.2 4,171,928 + AO356_18540 0.83 -1.3 4,171,929 - AO356_18540 0.83 +0.8
Or see this region's nucleotide sequence