Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_18295

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_18285 and AO356_18290 are separated by 89 nucleotidesAO356_18290 and AO356_18295 are separated by 231 nucleotidesAO356_18295 and AO356_18300 are separated by 198 nucleotidesAO356_18300 and AO356_18305 are separated by 316 nucleotides AO356_18285: AO356_18285 - dehydrogenase, at 4,120,551 to 4,122,659 _18285 AO356_18290: AO356_18290 - glutaredoxin, at 4,122,749 to 4,123,090 _18290 AO356_18295: AO356_18295 - bacterioferritin, at 4,123,322 to 4,123,795 _18295 AO356_18300: AO356_18300 - (2Fe-2S)-binding protein, at 4,123,994 to 4,124,212 _18300 AO356_18305: AO356_18305 - alkyl hydroperoxide reductase, at 4,124,529 to 4,125,131 _18305 Position (kb) 4123 4124Strain fitness (log2 ratio) -2 -1 0 1 2at 4122.326 kb on + strand, within AO356_18285at 4122.326 kb on + strand, within AO356_18285at 4122.326 kb on + strand, within AO356_18285at 4122.326 kb on + strand, within AO356_18285at 4122.326 kb on + strand, within AO356_18285at 4122.326 kb on + strand, within AO356_18285at 4122.326 kb on + strand, within AO356_18285at 4122.326 kb on + strand, within AO356_18285at 4122.326 kb on + strand, within AO356_18285at 4122.326 kb on + strand, within AO356_18285at 4122.326 kb on + strand, within AO356_18285at 4122.327 kb on - strand, within AO356_18285at 4122.327 kb on - strand, within AO356_18285at 4122.327 kb on - strand, within AO356_18285at 4122.327 kb on - strand, within AO356_18285at 4122.327 kb on - strand, within AO356_18285at 4122.327 kb on - strand, within AO356_18285at 4122.327 kb on - strand, within AO356_18285at 4122.327 kb on - strand, within AO356_18285at 4122.460 kb on + strandat 4122.460 kb on + strandat 4122.460 kb on + strandat 4122.634 kb on + strandat 4122.635 kb on - strandat 4122.657 kb on + strandat 4122.658 kb on - strandat 4122.803 kb on + strand, within AO356_18290at 4123.161 kb on + strandat 4123.185 kb on + strandat 4123.185 kb on + strandat 4123.185 kb on + strandat 4123.238 kb on + strandat 4123.239 kb on - strandat 4123.299 kb on + strandat 4123.300 kb on - strandat 4123.323 kb on + strandat 4123.323 kb on + strandat 4123.324 kb on - strandat 4123.350 kb on + strandat 4123.350 kb on + strandat 4123.350 kb on + strandat 4123.350 kb on + strandat 4123.350 kb on + strandat 4123.351 kb on - strandat 4123.351 kb on - strandat 4123.662 kb on + strand, within AO356_18295at 4123.701 kb on + strand, within AO356_18295at 4123.701 kb on + strand, within AO356_18295at 4123.701 kb on + strand, within AO356_18295at 4123.702 kb on - strand, within AO356_18295at 4123.702 kb on - strand, within AO356_18295at 4123.702 kb on - strand, within AO356_18295at 4123.722 kb on + strand, within AO356_18295at 4123.722 kb on + strand, within AO356_18295at 4123.723 kb on - strand, within AO356_18295at 4123.723 kb on - strand, within AO356_18295at 4123.723 kb on - strand, within AO356_18295at 4123.723 kb on - strand, within AO356_18295at 4123.780 kb on + strandat 4123.780 kb on + strandat 4123.780 kb on + strandat 4123.780 kb on + strandat 4123.780 kb on + strandat 4123.780 kb on + strandat 4123.780 kb on + strandat 4123.780 kb on + strandat 4123.780 kb on + strandat 4123.781 kb on - strandat 4123.781 kb on - strandat 4123.781 kb on - strandat 4123.781 kb on - strandat 4123.781 kb on - strandat 4123.781 kb on - strandat 4123.781 kb on - strandat 4123.781 kb on - strandat 4123.812 kb on + strandat 4123.812 kb on + strandat 4123.813 kb on - strandat 4123.813 kb on - strandat 4123.815 kb on + strandat 4123.815 kb on + strandat 4123.815 kb on + strandat 4123.815 kb on + strandat 4123.816 kb on - strandat 4123.816 kb on - strandat 4123.816 kb on - strandat 4123.816 kb on - strandat 4123.823 kb on + strandat 4123.823 kb on + strandat 4123.823 kb on + strandat 4123.824 kb on - strandat 4123.824 kb on - strandat 4123.824 kb on - strandat 4123.824 kb on - strandat 4123.824 kb on - strandat 4123.824 kb on - strandat 4123.824 kb on - strandat 4123.824 kb on - strandat 4123.826 kb on - strandat 4123.846 kb on + strandat 4123.847 kb on - strandat 4123.847 kb on - strandat 4123.847 kb on - strandat 4123.866 kb on - strandat 4123.866 kb on - strandat 4124.005 kb on + strandat 4124.157 kb on + strand, within AO356_18300at 4124.157 kb on + strand, within AO356_18300at 4124.157 kb on + strand, within AO356_18300at 4124.157 kb on + strand, within AO356_18300at 4124.157 kb on + strand, within AO356_18300at 4124.157 kb on + strand, within AO356_18300at 4124.158 kb on - strand, within AO356_18300at 4124.158 kb on - strand, within AO356_18300at 4124.158 kb on - strand, within AO356_18300at 4124.158 kb on - strand, within AO356_18300at 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.204 kb on + strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.205 kb on - strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.208 kb on + strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.209 kb on - strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.212 kb on + strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.213 kb on - strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.422 kb on + strandat 4124.423 kb on - strandat 4124.423 kb on - strandat 4124.423 kb on - strandat 4124.423 kb on - strandat 4124.423 kb on - strandat 4124.423 kb on - strandat 4124.423 kb on - strandat 4124.423 kb on - strandat 4124.423 kb on - strandat 4124.507 kb on + strandat 4124.507 kb on + strandat 4124.508 kb on - strandat 4124.511 kb on + strandat 4124.511 kb on + strandat 4124.511 kb on + strandat 4124.511 kb on + strandat 4124.511 kb on + strandat 4124.511 kb on + strandat 4124.511 kb on + strandat 4124.512 kb on - strandat 4124.512 kb on - strandat 4124.536 kb on + strandat 4124.537 kb on - strandat 4124.537 kb on - strandat 4124.537 kb on - strandat 4124.542 kb on + strandat 4124.543 kb on - strandat 4124.543 kb on - strandat 4124.637 kb on + strand, within AO356_18305at 4124.637 kb on + strand, within AO356_18305at 4124.637 kb on + strand, within AO356_18305at 4124.637 kb on + strand, within AO356_18305at 4124.655 kb on + strand, within AO356_18305at 4124.655 kb on + strand, within AO356_18305

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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4,122,326 + AO356_18285 0.84 +0.4
4,122,326 + AO356_18285 0.84 +0.6
4,122,326 + AO356_18285 0.84 +0.3
4,122,326 + AO356_18285 0.84 +0.7
4,122,326 + AO356_18285 0.84 -0.2
4,122,326 + AO356_18285 0.84 +0.7
4,122,326 + AO356_18285 0.84 +1.3
4,122,326 + AO356_18285 0.84 +0.6
4,122,326 + AO356_18285 0.84 +0.5
4,122,326 + AO356_18285 0.84 +0.4
4,122,326 + AO356_18285 0.84 -0.1
4,122,327 - AO356_18285 0.84 +0.3
4,122,327 - AO356_18285 0.84 +0.6
4,122,327 - AO356_18285 0.84 -0.3
4,122,327 - AO356_18285 0.84 -0.2
4,122,327 - AO356_18285 0.84 +0.9
4,122,327 - AO356_18285 0.84 -0.3
4,122,327 - AO356_18285 0.84 +1.1
4,122,327 - AO356_18285 0.84 +0.5
4,122,460 + -0.6
4,122,460 + -0.9
4,122,460 + +0.3
4,122,634 + +0.2
4,122,635 - +0.6
4,122,657 + +1.1
4,122,658 - +0.8
4,122,803 + AO356_18290 0.16 +0.3
4,123,161 + +0.3
4,123,185 + +0.6
4,123,185 + +1.2
4,123,185 + +1.1
4,123,238 + +0.0
4,123,239 - +0.2
4,123,299 + +0.3
4,123,300 - +0.2
4,123,323 + +0.4
4,123,323 + +0.2
4,123,324 - +0.1
4,123,350 + +1.4
4,123,350 + +0.0
4,123,350 + +0.1
4,123,350 + +0.7
4,123,350 + +1.0
4,123,351 - +0.6
4,123,351 - +0.4
4,123,662 + AO356_18295 0.72 +0.4
4,123,701 + AO356_18295 0.80 +1.7
4,123,701 + AO356_18295 0.80 +0.0
4,123,701 + AO356_18295 0.80 +0.3
4,123,702 - AO356_18295 0.80 +0.6
4,123,702 - AO356_18295 0.80 +1.6
4,123,702 - AO356_18295 0.80 -0.2
4,123,722 + AO356_18295 0.84 +0.6
4,123,722 + AO356_18295 0.84 +0.6
4,123,723 - AO356_18295 0.85 +0.9
4,123,723 - AO356_18295 0.85 -0.0
4,123,723 - AO356_18295 0.85 +0.8
4,123,723 - AO356_18295 0.85 +1.0
4,123,780 + +0.0
4,123,780 + +1.8
4,123,780 + +0.3
4,123,780 + -1.5
4,123,780 + +0.2
4,123,780 + +0.2
4,123,780 + +1.1
4,123,780 + +0.4
4,123,780 + +1.7
4,123,781 - +0.1
4,123,781 - +0.8
4,123,781 - -0.0
4,123,781 - -0.1
4,123,781 - +0.7
4,123,781 - +0.3
4,123,781 - +1.1
4,123,781 - -0.2
4,123,812 + +1.6
4,123,812 + +1.3
4,123,813 - +0.1
4,123,813 - +0.7
4,123,815 + +1.3
4,123,815 + +1.5
4,123,815 + +1.4
4,123,815 + +0.9
4,123,816 - -0.3
4,123,816 - -0.4
4,123,816 - +0.1
4,123,816 - +0.4
4,123,823 + +1.8
4,123,823 + -1.0
4,123,823 + +1.1
4,123,824 - +0.2
4,123,824 - -0.7
4,123,824 - +0.2
4,123,824 - -0.3
4,123,824 - -0.2
4,123,824 - +1.1
4,123,824 - -0.2
4,123,824 - +0.2
4,123,826 - +1.5
4,123,846 + +1.1
4,123,847 - +0.1
4,123,847 - +1.3
4,123,847 - +1.3
4,123,866 - +0.7
4,123,866 - +0.4
4,124,005 + +0.3
4,124,157 + AO356_18300 0.74 -0.5
4,124,157 + AO356_18300 0.74 +0.5
4,124,157 + AO356_18300 0.74 -0.1
4,124,157 + AO356_18300 0.74 -0.5
4,124,157 + AO356_18300 0.74 +0.5
4,124,157 + AO356_18300 0.74 -0.3
4,124,158 - AO356_18300 0.75 -0.7
4,124,158 - AO356_18300 0.75 -0.4
4,124,158 - AO356_18300 0.75 -1.0
4,124,158 - AO356_18300 0.75 +0.4
4,124,204 + +0.0
4,124,204 + +0.9
4,124,204 + -0.4
4,124,204 + +0.5
4,124,204 + -0.6
4,124,204 + +1.0
4,124,204 + +0.3
4,124,204 + -0.3
4,124,204 + +1.3
4,124,204 + +0.9
4,124,204 + +0.1
4,124,204 + -0.4
4,124,204 + -0.8
4,124,204 + +0.8
4,124,204 + +1.0
4,124,204 + +0.6
4,124,204 + -0.0
4,124,204 + -0.6
4,124,204 + +0.4
4,124,204 + -0.0
4,124,204 + +0.1
4,124,204 + -0.3
4,124,205 - -0.6
4,124,205 - +0.2
4,124,205 - -0.1
4,124,205 - +1.1
4,124,205 - -1.1
4,124,205 - +1.4
4,124,205 - +0.9
4,124,205 - +0.1
4,124,205 - -0.9
4,124,205 - +0.1
4,124,205 - -0.0
4,124,205 - +0.4
4,124,205 - -0.0
4,124,205 - +0.1
4,124,205 - +0.8
4,124,205 - +0.3
4,124,205 - +0.4
4,124,205 - -1.9
4,124,205 - +0.5
4,124,205 - -0.9
4,124,205 - +1.7
4,124,205 - +0.9
4,124,205 - -0.8
4,124,208 + +0.0
4,124,208 + +1.0
4,124,208 + +0.3
4,124,208 + +0.4
4,124,208 + -0.1
4,124,208 + -0.8
4,124,208 + +0.6
4,124,208 + -0.3
4,124,208 + +0.0
4,124,208 + -0.0
4,124,208 + +0.1
4,124,208 + -0.7
4,124,208 + -0.4
4,124,208 + +0.8
4,124,208 + +0.5
4,124,208 + -0.1
4,124,208 + +0.6
4,124,208 + +0.2
4,124,208 + +0.2
4,124,208 + +0.8
4,124,208 + -0.1
4,124,208 + +0.4
4,124,208 + +0.2
4,124,209 - +0.1
4,124,209 - +1.1
4,124,209 - -0.6
4,124,209 - -0.1
4,124,209 - +2.0
4,124,209 - -0.4
4,124,209 - -0.1
4,124,209 - +0.7
4,124,209 - -1.4
4,124,209 - +0.3
4,124,209 - +0.3
4,124,209 - +0.6
4,124,209 - +0.2
4,124,209 - -0.1
4,124,209 - -0.2
4,124,209 - -1.3
4,124,209 - +0.3
4,124,209 - +0.3
4,124,209 - +0.0
4,124,209 - +0.4
4,124,209 - -0.2
4,124,209 - -0.3
4,124,209 - +0.2
4,124,209 - +0.3
4,124,209 - -1.0
4,124,209 - -0.2
4,124,209 - +0.5
4,124,209 - +0.3
4,124,209 - +0.8
4,124,209 - +0.7
4,124,209 - +0.3
4,124,209 - +0.3
4,124,209 - -0.7
4,124,209 - +0.2
4,124,209 - +0.2
4,124,209 - -0.0
4,124,209 - +1.0
4,124,212 + +0.1
4,124,212 + -0.4
4,124,212 + -0.9
4,124,212 + -0.2
4,124,212 + -0.2
4,124,212 + +1.5
4,124,212 + +0.6
4,124,212 + -0.3
4,124,212 + +0.7
4,124,212 + -0.9
4,124,212 + +0.4
4,124,212 + +0.2
4,124,212 + +1.7
4,124,212 + +1.2
4,124,212 + +0.8
4,124,212 + -0.1
4,124,212 + -0.1
4,124,213 - +1.0
4,124,213 - -0.4
4,124,213 - +0.1
4,124,213 - -0.1
4,124,213 - -1.6
4,124,213 - +0.7
4,124,213 - +0.4
4,124,213 - +0.4
4,124,213 - -0.9
4,124,213 - -0.7
4,124,213 - +0.6
4,124,213 - +0.9
4,124,213 - +0.5
4,124,213 - +0.7
4,124,213 - +0.0
4,124,213 - -0.0
4,124,213 - -0.7
4,124,213 - +0.3
4,124,213 - +0.8
4,124,422 + -0.7
4,124,422 + +0.4
4,124,422 + +1.3
4,124,422 + +0.3
4,124,422 + +0.9
4,124,422 + +0.3
4,124,422 + -0.1
4,124,422 + -0.6
4,124,422 + +1.6
4,124,422 + +0.3
4,124,422 + +0.1
4,124,422 + +0.5
4,124,422 + -0.2
4,124,422 + -0.0
4,124,422 + -1.0
4,124,422 + -0.4
4,124,423 - -0.1
4,124,423 - -1.0
4,124,423 - +1.1
4,124,423 - +0.3
4,124,423 - -0.4
4,124,423 - -1.3
4,124,423 - -0.2
4,124,423 - -0.9
4,124,423 - -1.9
4,124,507 + -0.8
4,124,507 + -0.1
4,124,508 - -0.9
4,124,511 + -0.2
4,124,511 + -0.9
4,124,511 + +0.1
4,124,511 + -0.2
4,124,511 + -0.6
4,124,511 + +0.0
4,124,511 + -0.2
4,124,512 - +0.0
4,124,512 - +0.3
4,124,536 + +0.4
4,124,537 - -0.3
4,124,537 - +0.0
4,124,537 - -0.5
4,124,542 + +1.1
4,124,543 - +0.1
4,124,543 - +1.1
4,124,637 + AO356_18305 0.18 -0.5
4,124,637 + AO356_18305 0.18 -0.4
4,124,637 + AO356_18305 0.18 +0.2
4,124,637 + AO356_18305 0.18 -0.9
4,124,655 + AO356_18305 0.21 +0.4
4,124,655 + AO356_18305 0.21 -0.1

Or see this region's nucleotide sequence