Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17565 and AO356_17570 are separated by 146 nucleotides AO356_17570 and AO356_17575 are separated by 16 nucleotides AO356_17575 and AO356_17580 overlap by 4 nucleotides AO356_17580 and AO356_17585 are separated by 116 nucleotides AO356_17585 and AO356_17590 are separated by 6 nucleotides
AO356_17565: AO356_17565 - ADP-ribose pyrophosphatase, at 3,960,667 to 3,961,218
_17565
AO356_17570: AO356_17570 - DNA mismatch repair protein MutT, at 3,961,365 to 3,961,964
_17570
AO356_17575: AO356_17575 - hypothetical protein, at 3,961,981 to 3,962,505
_17575
AO356_17580: AO356_17580 - Fe-S protein, at 3,962,502 to 3,962,711
_17580
AO356_17585: AO356_17585 - hypothetical protein, at 3,962,828 to 3,963,490
_17585
AO356_17590: AO356_17590 - hypothetical protein, at 3,963,497 to 3,963,727
_17590
Position (kb)
3961
3962
3963 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3961.244 kb on - strand at 3961.343 kb on - strand at 3961.349 kb on + strand at 3961.349 kb on + strand at 3961.350 kb on - strand at 3961.350 kb on - strand at 3961.378 kb on + strand at 3961.378 kb on + strand at 3961.379 kb on - strand at 3961.379 kb on - strand at 3961.390 kb on + strand at 3961.400 kb on + strand at 3961.401 kb on - strand at 3961.401 kb on - strand at 3961.689 kb on + strand, within AO356_17570 at 3961.690 kb on - strand, within AO356_17570 at 3961.690 kb on - strand, within AO356_17570 at 3961.710 kb on + strand, within AO356_17570 at 3961.710 kb on + strand, within AO356_17570 at 3961.710 kb on + strand, within AO356_17570 at 3961.711 kb on - strand, within AO356_17570 at 3961.711 kb on - strand, within AO356_17570 at 3961.711 kb on - strand, within AO356_17570 at 3961.711 kb on - strand, within AO356_17570 at 3961.720 kb on - strand, within AO356_17570 at 3961.720 kb on - strand, within AO356_17570 at 3961.813 kb on - strand, within AO356_17570 at 3961.823 kb on + strand, within AO356_17570 at 3961.823 kb on + strand, within AO356_17570 at 3961.823 kb on + strand, within AO356_17570 at 3961.823 kb on + strand, within AO356_17570 at 3961.824 kb on - strand, within AO356_17570 at 3961.824 kb on - strand, within AO356_17570 at 3961.830 kb on + strand, within AO356_17570 at 3961.830 kb on + strand, within AO356_17570 at 3961.830 kb on + strand, within AO356_17570 at 3961.830 kb on + strand, within AO356_17570 at 3961.830 kb on + strand, within AO356_17570 at 3961.830 kb on + strand, within AO356_17570 at 3961.830 kb on + strand, within AO356_17570 at 3961.830 kb on + strand, within AO356_17570 at 3961.830 kb on + strand, within AO356_17570 at 3961.830 kb on + strand, within AO356_17570 at 3961.830 kb on + strand, within AO356_17570 at 3961.831 kb on - strand, within AO356_17570 at 3961.831 kb on - strand, within AO356_17570 at 3961.831 kb on - strand, within AO356_17570 at 3961.831 kb on - strand, within AO356_17570 at 3961.831 kb on - strand, within AO356_17570 at 3961.831 kb on - strand, within AO356_17570 at 3961.831 kb on - strand, within AO356_17570 at 3961.831 kb on - strand, within AO356_17570 at 3961.831 kb on - strand, within AO356_17570 at 3961.831 kb on - strand, within AO356_17570 at 3961.831 kb on - strand, within AO356_17570 at 3961.831 kb on - strand, within AO356_17570 at 3961.842 kb on + strand, within AO356_17570 at 3961.857 kb on + strand, within AO356_17570 at 3961.857 kb on + strand, within AO356_17570 at 3961.857 kb on + strand, within AO356_17570 at 3961.858 kb on - strand, within AO356_17570 at 3961.911 kb on + strand at 3961.911 kb on + strand at 3961.912 kb on - strand at 3961.958 kb on + strand at 3961.958 kb on + strand at 3961.958 kb on + strand at 3961.959 kb on - strand at 3961.959 kb on - strand at 3961.987 kb on + strand at 3961.987 kb on + strand at 3961.987 kb on + strand at 3962.244 kb on + strand, within AO356_17575 at 3962.244 kb on + strand, within AO356_17575 at 3962.244 kb on + strand, within AO356_17575 at 3962.244 kb on + strand, within AO356_17575 at 3962.244 kb on + strand, within AO356_17575 at 3962.258 kb on - strand, within AO356_17575 at 3962.453 kb on - strand at 3962.453 kb on - strand at 3962.981 kb on + strand, within AO356_17585 at 3962.981 kb on + strand, within AO356_17585 at 3962.981 kb on + strand, within AO356_17585 at 3962.981 kb on + strand, within AO356_17585 at 3962.981 kb on + strand, within AO356_17585 at 3962.981 kb on + strand, within AO356_17585 at 3963.003 kb on + strand, within AO356_17585 at 3963.003 kb on + strand, within AO356_17585 at 3963.003 kb on + strand, within AO356_17585 at 3963.004 kb on - strand, within AO356_17585 at 3963.004 kb on - strand, within AO356_17585 at 3963.004 kb on - strand, within AO356_17585 at 3963.004 kb on - strand, within AO356_17585 at 3963.004 kb on - strand, within AO356_17585 at 3963.004 kb on - strand, within AO356_17585 at 3963.012 kb on + strand, within AO356_17585 at 3963.024 kb on + strand, within AO356_17585 at 3963.024 kb on + strand, within AO356_17585 at 3963.024 kb on + strand, within AO356_17585 at 3963.024 kb on + strand, within AO356_17585 at 3963.024 kb on + strand, within AO356_17585 at 3963.024 kb on + strand, within AO356_17585 at 3963.024 kb on + strand, within AO356_17585 at 3963.025 kb on - strand, within AO356_17585 at 3963.025 kb on - strand, within AO356_17585 at 3963.025 kb on - strand, within AO356_17585 at 3963.087 kb on + strand, within AO356_17585 at 3963.096 kb on + strand, within AO356_17585 at 3963.096 kb on + strand, within AO356_17585 at 3963.096 kb on + strand, within AO356_17585 at 3963.097 kb on - strand, within AO356_17585 at 3963.097 kb on - strand, within AO356_17585 at 3963.097 kb on - strand, within AO356_17585 at 3963.122 kb on + strand, within AO356_17585 at 3963.122 kb on + strand, within AO356_17585 at 3963.122 kb on + strand, within AO356_17585 at 3963.123 kb on - strand, within AO356_17585 at 3963.123 kb on - strand, within AO356_17585 at 3963.123 kb on - strand, within AO356_17585 at 3963.183 kb on + strand, within AO356_17585 at 3963.183 kb on + strand, within AO356_17585 at 3963.184 kb on - strand, within AO356_17585 at 3963.396 kb on + strand, within AO356_17585 at 3963.397 kb on - strand, within AO356_17585 at 3963.397 kb on - strand, within AO356_17585 at 3963.397 kb on - strand, within AO356_17585 at 3963.478 kb on + strand at 3963.478 kb on + strand at 3963.479 kb on - strand at 3963.479 kb on - strand at 3963.479 kb on - strand at 3963.479 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 3,961,244 - +0.5 3,961,343 - +0.2 3,961,349 + -0.1 3,961,349 + +0.6 3,961,350 - +0.1 3,961,350 - +0.2 3,961,378 + +0.4 3,961,378 + +1.7 3,961,379 - +0.9 3,961,379 - +1.3 3,961,390 + +0.8 3,961,400 + -0.2 3,961,401 - +0.7 3,961,401 - -0.7 3,961,689 + AO356_17570 0.54 +0.4 3,961,690 - AO356_17570 0.54 +1.0 3,961,690 - AO356_17570 0.54 -0.6 3,961,710 + AO356_17570 0.57 +0.4 3,961,710 + AO356_17570 0.57 +0.9 3,961,710 + AO356_17570 0.57 -0.5 3,961,711 - AO356_17570 0.58 -1.9 3,961,711 - AO356_17570 0.58 -1.4 3,961,711 - AO356_17570 0.58 +0.4 3,961,711 - AO356_17570 0.58 -0.3 3,961,720 - AO356_17570 0.59 +0.1 3,961,720 - AO356_17570 0.59 -0.8 3,961,813 - AO356_17570 0.75 -0.1 3,961,823 + AO356_17570 0.76 +1.2 3,961,823 + AO356_17570 0.76 +2.0 3,961,823 + AO356_17570 0.76 +0.7 3,961,823 + AO356_17570 0.76 -0.1 3,961,824 - AO356_17570 0.77 +0.1 3,961,824 - AO356_17570 0.77 -1.0 3,961,830 + AO356_17570 0.78 +0.1 3,961,830 + AO356_17570 0.78 +0.3 3,961,830 + AO356_17570 0.78 -0.0 3,961,830 + AO356_17570 0.78 -0.3 3,961,830 + AO356_17570 0.78 +1.0 3,961,830 + AO356_17570 0.78 -1.0 3,961,830 + AO356_17570 0.78 -0.5 3,961,830 + AO356_17570 0.78 -2.4 3,961,830 + AO356_17570 0.78 -0.6 3,961,830 + AO356_17570 0.78 +0.0 3,961,830 + AO356_17570 0.78 -0.2 3,961,831 - AO356_17570 0.78 -2.1 3,961,831 - AO356_17570 0.78 +0.9 3,961,831 - AO356_17570 0.78 +0.6 3,961,831 - AO356_17570 0.78 +0.8 3,961,831 - AO356_17570 0.78 +1.9 3,961,831 - AO356_17570 0.78 -0.1 3,961,831 - AO356_17570 0.78 -0.5 3,961,831 - AO356_17570 0.78 -0.2 3,961,831 - AO356_17570 0.78 +0.1 3,961,831 - AO356_17570 0.78 +0.3 3,961,831 - AO356_17570 0.78 +0.0 3,961,831 - AO356_17570 0.78 +0.3 3,961,842 + AO356_17570 0.80 +0.2 3,961,857 + AO356_17570 0.82 -2.0 3,961,857 + AO356_17570 0.82 +0.3 3,961,857 + AO356_17570 0.82 +0.3 3,961,858 - AO356_17570 0.82 +0.9 3,961,911 + -0.5 3,961,911 + -1.0 3,961,912 - -0.1 3,961,958 + +0.3 3,961,958 + -0.9 3,961,958 + +1.1 3,961,959 - -0.2 3,961,959 - +0.2 3,961,987 + -0.9 3,961,987 + -0.2 3,961,987 + -0.6 3,962,244 + AO356_17575 0.50 +0.8 3,962,244 + AO356_17575 0.50 +0.8 3,962,244 + AO356_17575 0.50 +1.8 3,962,244 + AO356_17575 0.50 +0.0 3,962,244 + AO356_17575 0.50 +0.3 3,962,258 - AO356_17575 0.53 -1.7 3,962,453 - +0.5 3,962,453 - -0.1 3,962,981 + AO356_17585 0.23 +0.7 3,962,981 + AO356_17585 0.23 +0.6 3,962,981 + AO356_17585 0.23 -0.6 3,962,981 + AO356_17585 0.23 -0.5 3,962,981 + AO356_17585 0.23 -0.1 3,962,981 + AO356_17585 0.23 +0.3 3,963,003 + AO356_17585 0.26 -1.0 3,963,003 + AO356_17585 0.26 -0.0 3,963,003 + AO356_17585 0.26 +2.2 3,963,004 - AO356_17585 0.27 -0.6 3,963,004 - AO356_17585 0.27 -0.2 3,963,004 - AO356_17585 0.27 -0.4 3,963,004 - AO356_17585 0.27 -0.2 3,963,004 - AO356_17585 0.27 -1.7 3,963,004 - AO356_17585 0.27 -0.4 3,963,012 + AO356_17585 0.28 +0.8 3,963,024 + AO356_17585 0.30 +0.2 3,963,024 + AO356_17585 0.30 -0.5 3,963,024 + AO356_17585 0.30 -0.0 3,963,024 + AO356_17585 0.30 -0.5 3,963,024 + AO356_17585 0.30 -0.3 3,963,024 + AO356_17585 0.30 -0.0 3,963,024 + AO356_17585 0.30 -1.0 3,963,025 - AO356_17585 0.30 +0.2 3,963,025 - AO356_17585 0.30 -1.4 3,963,025 - AO356_17585 0.30 +2.1 3,963,087 + AO356_17585 0.39 -0.4 3,963,096 + AO356_17585 0.40 +1.2 3,963,096 + AO356_17585 0.40 +0.9 3,963,096 + AO356_17585 0.40 +1.5 3,963,097 - AO356_17585 0.41 -0.2 3,963,097 - AO356_17585 0.41 -0.3 3,963,097 - AO356_17585 0.41 -0.9 3,963,122 + AO356_17585 0.44 -0.1 3,963,122 + AO356_17585 0.44 +0.5 3,963,122 + AO356_17585 0.44 -0.2 3,963,123 - AO356_17585 0.44 +0.9 3,963,123 - AO356_17585 0.44 +0.4 3,963,123 - AO356_17585 0.44 +0.4 3,963,183 + AO356_17585 0.54 -0.2 3,963,183 + AO356_17585 0.54 -0.0 3,963,184 - AO356_17585 0.54 +0.6 3,963,396 + AO356_17585 0.86 -0.8 3,963,397 - AO356_17585 0.86 +0.9 3,963,397 - AO356_17585 0.86 -0.1 3,963,397 - AO356_17585 0.86 -0.3 3,963,478 + +0.0 3,963,478 + -1.4 3,963,479 - +0.3 3,963,479 - -0.7 3,963,479 - -0.3 3,963,479 - +0.5
Or see this region's nucleotide sequence