Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_17285 and AO356_17290 are separated by 11 nucleotides AO356_17290 and AO356_17295 are separated by 26 nucleotides
AO356_17285: AO356_17285 - alginate O-acetyltransferase, at 3,893,473 to 3,894,924
_17285
AO356_17290: AO356_17290 - poly(beta-D-mannuronate) C5 epimerase, at 3,894,936 to 3,896,525
_17290
AO356_17295: AO356_17295 - transcriptional regulator, at 3,896,552 to 3,898,042
_17295
Position (kb)
3894
3895
3896
3897 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3894.086 kb on + strand, within AO356_17285 at 3894.086 kb on + strand, within AO356_17285 at 3894.086 kb on + strand, within AO356_17285 at 3894.087 kb on - strand, within AO356_17285 at 3894.087 kb on - strand, within AO356_17285 at 3894.200 kb on + strand, within AO356_17285 at 3894.200 kb on + strand, within AO356_17285 at 3894.200 kb on + strand, within AO356_17285 at 3894.200 kb on + strand, within AO356_17285 at 3894.200 kb on + strand, within AO356_17285 at 3894.201 kb on - strand, within AO356_17285 at 3894.212 kb on + strand, within AO356_17285 at 3894.212 kb on + strand, within AO356_17285 at 3894.213 kb on - strand, within AO356_17285 at 3894.213 kb on - strand, within AO356_17285 at 3894.213 kb on - strand, within AO356_17285 at 3894.402 kb on - strand, within AO356_17285 at 3894.470 kb on + strand, within AO356_17285 at 3894.470 kb on + strand, within AO356_17285 at 3894.470 kb on + strand, within AO356_17285 at 3894.470 kb on + strand, within AO356_17285 at 3894.470 kb on + strand, within AO356_17285 at 3894.471 kb on - strand, within AO356_17285 at 3894.471 kb on - strand, within AO356_17285 at 3894.471 kb on - strand, within AO356_17285 at 3894.506 kb on + strand, within AO356_17285 at 3894.506 kb on + strand, within AO356_17285 at 3894.506 kb on + strand, within AO356_17285 at 3894.506 kb on + strand, within AO356_17285 at 3894.507 kb on - strand, within AO356_17285 at 3894.507 kb on - strand, within AO356_17285 at 3894.507 kb on - strand, within AO356_17285 at 3894.507 kb on - strand, within AO356_17285 at 3894.507 kb on - strand, within AO356_17285 at 3894.527 kb on + strand, within AO356_17285 at 3894.594 kb on - strand, within AO356_17285 at 3894.657 kb on - strand, within AO356_17285 at 3894.767 kb on + strand, within AO356_17285 at 3894.767 kb on + strand, within AO356_17285 at 3894.767 kb on + strand, within AO356_17285 at 3894.767 kb on + strand, within AO356_17285 at 3894.768 kb on - strand, within AO356_17285 at 3894.768 kb on - strand, within AO356_17285 at 3894.924 kb on + strand at 3894.924 kb on + strand at 3894.924 kb on + strand at 3894.925 kb on - strand at 3894.925 kb on - strand at 3894.925 kb on - strand at 3895.090 kb on + strand at 3895.240 kb on + strand, within AO356_17290 at 3895.240 kb on + strand, within AO356_17290 at 3895.240 kb on + strand, within AO356_17290 at 3895.240 kb on + strand, within AO356_17290 at 3895.240 kb on + strand, within AO356_17290 at 3895.240 kb on + strand, within AO356_17290 at 3895.241 kb on - strand, within AO356_17290 at 3895.241 kb on - strand, within AO356_17290 at 3895.372 kb on + strand, within AO356_17290 at 3895.372 kb on + strand, within AO356_17290 at 3895.373 kb on - strand, within AO356_17290 at 3895.373 kb on - strand, within AO356_17290 at 3895.373 kb on - strand, within AO356_17290 at 3895.373 kb on - strand, within AO356_17290 at 3895.402 kb on + strand, within AO356_17290 at 3895.402 kb on + strand, within AO356_17290 at 3895.403 kb on - strand, within AO356_17290 at 3895.414 kb on + strand, within AO356_17290 at 3895.414 kb on + strand, within AO356_17290 at 3895.474 kb on + strand, within AO356_17290 at 3895.474 kb on + strand, within AO356_17290 at 3895.475 kb on - strand, within AO356_17290 at 3895.624 kb on + strand, within AO356_17290 at 3895.624 kb on + strand, within AO356_17290 at 3895.624 kb on + strand, within AO356_17290 at 3895.624 kb on + strand, within AO356_17290 at 3895.624 kb on + strand, within AO356_17290 at 3895.625 kb on - strand, within AO356_17290 at 3895.625 kb on - strand, within AO356_17290 at 3895.625 kb on - strand, within AO356_17290 at 3895.660 kb on + strand, within AO356_17290 at 3895.661 kb on - strand, within AO356_17290 at 3895.666 kb on + strand, within AO356_17290 at 3895.666 kb on + strand, within AO356_17290 at 3895.666 kb on + strand, within AO356_17290 at 3895.666 kb on + strand, within AO356_17290 at 3895.666 kb on + strand, within AO356_17290 at 3895.667 kb on - strand, within AO356_17290 at 3895.667 kb on - strand, within AO356_17290 at 3895.675 kb on + strand, within AO356_17290 at 3895.756 kb on + strand, within AO356_17290 at 3895.766 kb on + strand, within AO356_17290 at 3895.766 kb on + strand, within AO356_17290 at 3895.767 kb on - strand, within AO356_17290 at 3895.767 kb on - strand, within AO356_17290 at 3895.767 kb on - strand, within AO356_17290 at 3895.784 kb on + strand, within AO356_17290 at 3895.784 kb on + strand, within AO356_17290 at 3895.784 kb on + strand, within AO356_17290 at 3895.784 kb on + strand, within AO356_17290 at 3895.784 kb on + strand, within AO356_17290 at 3895.784 kb on + strand, within AO356_17290 at 3895.784 kb on + strand, within AO356_17290 at 3895.784 kb on + strand, within AO356_17290 at 3895.785 kb on - strand, within AO356_17290 at 3895.785 kb on - strand, within AO356_17290 at 3895.785 kb on - strand, within AO356_17290 at 3895.828 kb on + strand, within AO356_17290 at 3895.828 kb on + strand, within AO356_17290 at 3895.828 kb on + strand, within AO356_17290 at 3895.829 kb on - strand, within AO356_17290 at 3895.829 kb on - strand, within AO356_17290 at 3895.829 kb on - strand, within AO356_17290 at 3895.829 kb on - strand, within AO356_17290 at 3895.829 kb on - strand, within AO356_17290 at 3895.829 kb on - strand, within AO356_17290 at 3895.946 kb on + strand, within AO356_17290 at 3895.946 kb on + strand, within AO356_17290 at 3895.946 kb on + strand, within AO356_17290 at 3895.946 kb on + strand, within AO356_17290 at 3895.946 kb on + strand, within AO356_17290 at 3895.946 kb on + strand, within AO356_17290 at 3895.946 kb on + strand, within AO356_17290 at 3895.946 kb on + strand, within AO356_17290 at 3895.946 kb on + strand, within AO356_17290 at 3895.946 kb on + strand, within AO356_17290 at 3895.946 kb on + strand, within AO356_17290 at 3895.947 kb on - strand, within AO356_17290 at 3895.947 kb on - strand, within AO356_17290 at 3895.947 kb on - strand, within AO356_17290 at 3895.947 kb on - strand, within AO356_17290 at 3895.947 kb on - strand, within AO356_17290 at 3895.947 kb on - strand, within AO356_17290 at 3895.947 kb on - strand, within AO356_17290 at 3895.947 kb on - strand, within AO356_17290 at 3895.947 kb on - strand, within AO356_17290 at 3896.089 kb on + strand, within AO356_17290 at 3896.089 kb on + strand, within AO356_17290 at 3896.090 kb on - strand, within AO356_17290 at 3896.090 kb on - strand, within AO356_17290 at 3896.090 kb on - strand, within AO356_17290 at 3896.090 kb on - strand, within AO356_17290 at 3896.090 kb on - strand, within AO356_17290 at 3896.090 kb on - strand, within AO356_17290 at 3896.090 kb on - strand, within AO356_17290 at 3896.128 kb on + strand, within AO356_17290 at 3896.128 kb on + strand, within AO356_17290 at 3896.128 kb on + strand, within AO356_17290 at 3896.128 kb on + strand, within AO356_17290 at 3896.129 kb on - strand, within AO356_17290 at 3896.301 kb on - strand, within AO356_17290 at 3896.371 kb on + strand at 3896.371 kb on + strand at 3896.372 kb on - strand at 3896.372 kb on - strand at 3896.372 kb on - strand at 3896.372 kb on - strand at 3896.372 kb on - strand at 3896.372 kb on - strand at 3896.372 kb on - strand at 3896.515 kb on + strand at 3896.592 kb on + strand at 3896.593 kb on - strand at 3896.614 kb on - strand at 3896.715 kb on + strand, within AO356_17295 at 3896.715 kb on + strand, within AO356_17295 at 3896.715 kb on + strand, within AO356_17295 at 3896.715 kb on + strand, within AO356_17295 at 3896.860 kb on + strand, within AO356_17295 at 3896.886 kb on + strand, within AO356_17295 at 3896.887 kb on - strand, within AO356_17295 at 3896.887 kb on - strand, within AO356_17295 at 3896.905 kb on - strand, within AO356_17295 at 3897.048 kb on + strand, within AO356_17295 at 3897.048 kb on + strand, within AO356_17295 at 3897.070 kb on - strand, within AO356_17295 at 3897.137 kb on + strand, within AO356_17295 at 3897.137 kb on + strand, within AO356_17295 at 3897.137 kb on + strand, within AO356_17295 at 3897.237 kb on + strand, within AO356_17295 at 3897.237 kb on + strand, within AO356_17295 at 3897.238 kb on - strand, within AO356_17295 at 3897.238 kb on - strand, within AO356_17295 at 3897.267 kb on + strand, within AO356_17295 at 3897.267 kb on + strand, within AO356_17295 at 3897.267 kb on + strand, within AO356_17295 at 3897.267 kb on + strand, within AO356_17295 at 3897.268 kb on - strand, within AO356_17295
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 3,894,086 + AO356_17285 0.42 -1.2 3,894,086 + AO356_17285 0.42 +0.6 3,894,086 + AO356_17285 0.42 -0.2 3,894,087 - AO356_17285 0.42 -2.6 3,894,087 - AO356_17285 0.42 -1.4 3,894,200 + AO356_17285 0.50 -0.2 3,894,200 + AO356_17285 0.50 -0.2 3,894,200 + AO356_17285 0.50 +0.7 3,894,200 + AO356_17285 0.50 +1.2 3,894,200 + AO356_17285 0.50 -2.1 3,894,201 - AO356_17285 0.50 +0.0 3,894,212 + AO356_17285 0.51 +0.3 3,894,212 + AO356_17285 0.51 -0.0 3,894,213 - AO356_17285 0.51 +0.9 3,894,213 - AO356_17285 0.51 +0.0 3,894,213 - AO356_17285 0.51 -2.0 3,894,402 - AO356_17285 0.64 -0.6 3,894,470 + AO356_17285 0.69 +0.0 3,894,470 + AO356_17285 0.69 -0.7 3,894,470 + AO356_17285 0.69 -0.0 3,894,470 + AO356_17285 0.69 -0.4 3,894,470 + AO356_17285 0.69 +0.5 3,894,471 - AO356_17285 0.69 -0.4 3,894,471 - AO356_17285 0.69 -0.4 3,894,471 - AO356_17285 0.69 -1.4 3,894,506 + AO356_17285 0.71 -0.4 3,894,506 + AO356_17285 0.71 +0.2 3,894,506 + AO356_17285 0.71 +0.2 3,894,506 + AO356_17285 0.71 +0.7 3,894,507 - AO356_17285 0.71 -0.2 3,894,507 - AO356_17285 0.71 -1.5 3,894,507 - AO356_17285 0.71 +0.0 3,894,507 - AO356_17285 0.71 -0.8 3,894,507 - AO356_17285 0.71 +0.5 3,894,527 + AO356_17285 0.73 -0.2 3,894,594 - AO356_17285 0.77 +1.1 3,894,657 - AO356_17285 0.82 +0.9 3,894,767 + AO356_17285 0.89 +0.3 3,894,767 + AO356_17285 0.89 +0.4 3,894,767 + AO356_17285 0.89 +0.7 3,894,767 + AO356_17285 0.89 +0.0 3,894,768 - AO356_17285 0.89 +0.1 3,894,768 - AO356_17285 0.89 -0.5 3,894,924 + +0.2 3,894,924 + +0.6 3,894,924 + -0.1 3,894,925 - -0.7 3,894,925 - -0.3 3,894,925 - -0.9 3,895,090 + +0.1 3,895,240 + AO356_17290 0.19 -0.4 3,895,240 + AO356_17290 0.19 +0.6 3,895,240 + AO356_17290 0.19 +0.4 3,895,240 + AO356_17290 0.19 -0.1 3,895,240 + AO356_17290 0.19 -0.4 3,895,240 + AO356_17290 0.19 +1.0 3,895,241 - AO356_17290 0.19 -0.2 3,895,241 - AO356_17290 0.19 -2.0 3,895,372 + AO356_17290 0.27 +0.4 3,895,372 + AO356_17290 0.27 -0.2 3,895,373 - AO356_17290 0.27 -1.1 3,895,373 - AO356_17290 0.27 +1.3 3,895,373 - AO356_17290 0.27 +0.9 3,895,373 - AO356_17290 0.27 +0.2 3,895,402 + AO356_17290 0.29 +0.0 3,895,402 + AO356_17290 0.29 -0.8 3,895,403 - AO356_17290 0.29 -1.2 3,895,414 + AO356_17290 0.30 -1.1 3,895,414 + AO356_17290 0.30 -0.9 3,895,474 + AO356_17290 0.34 -0.2 3,895,474 + AO356_17290 0.34 -1.0 3,895,475 - AO356_17290 0.34 -2.9 3,895,624 + AO356_17290 0.43 -0.8 3,895,624 + AO356_17290 0.43 +0.3 3,895,624 + AO356_17290 0.43 +0.3 3,895,624 + AO356_17290 0.43 +0.5 3,895,624 + AO356_17290 0.43 +0.3 3,895,625 - AO356_17290 0.43 -0.7 3,895,625 - AO356_17290 0.43 -2.2 3,895,625 - AO356_17290 0.43 -0.9 3,895,660 + AO356_17290 0.46 -0.2 3,895,661 - AO356_17290 0.46 +0.3 3,895,666 + AO356_17290 0.46 -0.1 3,895,666 + AO356_17290 0.46 +0.7 3,895,666 + AO356_17290 0.46 -0.4 3,895,666 + AO356_17290 0.46 +0.3 3,895,666 + AO356_17290 0.46 +0.3 3,895,667 - AO356_17290 0.46 -0.5 3,895,667 - AO356_17290 0.46 +0.2 3,895,675 + AO356_17290 0.46 -0.2 3,895,756 + AO356_17290 0.52 -0.2 3,895,766 + AO356_17290 0.52 -0.0 3,895,766 + AO356_17290 0.52 -1.5 3,895,767 - AO356_17290 0.52 +0.3 3,895,767 - AO356_17290 0.52 -0.2 3,895,767 - AO356_17290 0.52 +1.5 3,895,784 + AO356_17290 0.53 +0.6 3,895,784 + AO356_17290 0.53 -2.0 3,895,784 + AO356_17290 0.53 +0.0 3,895,784 + AO356_17290 0.53 -1.2 3,895,784 + AO356_17290 0.53 +0.2 3,895,784 + AO356_17290 0.53 -0.3 3,895,784 + AO356_17290 0.53 +1.7 3,895,784 + AO356_17290 0.53 -0.1 3,895,785 - AO356_17290 0.53 +0.8 3,895,785 - AO356_17290 0.53 -1.1 3,895,785 - AO356_17290 0.53 -1.4 3,895,828 + AO356_17290 0.56 -0.6 3,895,828 + AO356_17290 0.56 +0.6 3,895,828 + AO356_17290 0.56 -0.3 3,895,829 - AO356_17290 0.56 -0.6 3,895,829 - AO356_17290 0.56 -2.1 3,895,829 - AO356_17290 0.56 +0.6 3,895,829 - AO356_17290 0.56 -0.5 3,895,829 - AO356_17290 0.56 -0.2 3,895,829 - AO356_17290 0.56 -2.6 3,895,946 + AO356_17290 0.64 -0.2 3,895,946 + AO356_17290 0.64 -0.1 3,895,946 + AO356_17290 0.64 -1.5 3,895,946 + AO356_17290 0.64 -0.1 3,895,946 + AO356_17290 0.64 +0.1 3,895,946 + AO356_17290 0.64 +1.1 3,895,946 + AO356_17290 0.64 +1.1 3,895,946 + AO356_17290 0.64 +0.7 3,895,946 + AO356_17290 0.64 -0.6 3,895,946 + AO356_17290 0.64 +0.2 3,895,946 + AO356_17290 0.64 -0.1 3,895,947 - AO356_17290 0.64 -0.8 3,895,947 - AO356_17290 0.64 -2.4 3,895,947 - AO356_17290 0.64 -0.0 3,895,947 - AO356_17290 0.64 -1.1 3,895,947 - AO356_17290 0.64 +0.4 3,895,947 - AO356_17290 0.64 +0.3 3,895,947 - AO356_17290 0.64 +1.8 3,895,947 - AO356_17290 0.64 -1.3 3,895,947 - AO356_17290 0.64 +0.2 3,896,089 + AO356_17290 0.73 +0.4 3,896,089 + AO356_17290 0.73 +0.3 3,896,090 - AO356_17290 0.73 -0.4 3,896,090 - AO356_17290 0.73 -0.0 3,896,090 - AO356_17290 0.73 -1.2 3,896,090 - AO356_17290 0.73 -0.4 3,896,090 - AO356_17290 0.73 -1.0 3,896,090 - AO356_17290 0.73 -1.1 3,896,090 - AO356_17290 0.73 -2.0 3,896,128 + AO356_17290 0.75 +1.7 3,896,128 + AO356_17290 0.75 +0.7 3,896,128 + AO356_17290 0.75 +0.0 3,896,128 + AO356_17290 0.75 -0.3 3,896,129 - AO356_17290 0.75 -0.7 3,896,301 - AO356_17290 0.86 -1.2 3,896,371 + -0.3 3,896,371 + -1.4 3,896,372 - +0.3 3,896,372 - -1.2 3,896,372 - -0.6 3,896,372 - -0.8 3,896,372 - -1.4 3,896,372 - +0.5 3,896,372 - -0.2 3,896,515 + +0.3 3,896,592 + -0.7 3,896,593 - -0.9 3,896,614 - -3.7 3,896,715 + AO356_17295 0.11 +0.0 3,896,715 + AO356_17295 0.11 +0.6 3,896,715 + AO356_17295 0.11 +0.2 3,896,715 + AO356_17295 0.11 -0.1 3,896,860 + AO356_17295 0.21 -0.0 3,896,886 + AO356_17295 0.22 -0.7 3,896,887 - AO356_17295 0.22 +0.1 3,896,887 - AO356_17295 0.22 -0.2 3,896,905 - AO356_17295 0.24 +0.5 3,897,048 + AO356_17295 0.33 +0.0 3,897,048 + AO356_17295 0.33 +0.2 3,897,070 - AO356_17295 0.35 -0.1 3,897,137 + AO356_17295 0.39 +0.5 3,897,137 + AO356_17295 0.39 -0.2 3,897,137 + AO356_17295 0.39 +0.3 3,897,237 + AO356_17295 0.46 +1.3 3,897,237 + AO356_17295 0.46 +1.0 3,897,238 - AO356_17295 0.46 -0.9 3,897,238 - AO356_17295 0.46 -0.7 3,897,267 + AO356_17295 0.48 -0.5 3,897,267 + AO356_17295 0.48 +0.6 3,897,267 + AO356_17295 0.48 +0.7 3,897,267 + AO356_17295 0.48 -0.7 3,897,268 - AO356_17295 0.48 -0.6
Or see this region's nucleotide sequence