Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_17065

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_17055 and AO356_17060 are separated by 14 nucleotidesAO356_17060 and AO356_17065 are separated by 256 nucleotidesAO356_17065 and AO356_17070 overlap by 1 nucleotides AO356_17055: AO356_17055 - 50S ribosomal protein L13, at 3,841,511 to 3,841,939 _17055 AO356_17060: AO356_17060 - 30S ribosomal protein S9, at 3,841,954 to 3,842,346 _17060 AO356_17065: AO356_17065 - ubiquinol-cytochrome c reductase iron-sulfur subunit, at 3,842,603 to 3,843,196 _17065 AO356_17070: AO356_17070 - cytochrome B, at 3,843,196 to 3,844,407 _17070 Position (kb) 3842 3843 3844Strain fitness (log2 ratio) -1 0 1 2 3at 3842.452 kb on - strandat 3842.456 kb on + strandat 3842.457 kb on - strandat 3842.457 kb on - strandat 3842.457 kb on - strandat 3842.457 kb on - strandat 3842.457 kb on - strandat 3842.484 kb on + strandat 3842.484 kb on + strandat 3842.484 kb on + strandat 3842.488 kb on + strandat 3842.488 kb on + strandat 3842.488 kb on + strandat 3842.488 kb on + strandat 3842.488 kb on + strandat 3842.488 kb on + strandat 3842.489 kb on - strandat 3842.489 kb on - strandat 3842.489 kb on - strandat 3842.489 kb on - strandat 3842.489 kb on - strandat 3842.536 kb on + strandat 3842.550 kb on + strandat 3842.554 kb on + strandat 3842.557 kb on + strandat 3842.570 kb on + strandat 3842.570 kb on + strandat 3842.903 kb on - strand, within AO356_17065at 3842.916 kb on - strand, within AO356_17065at 3842.916 kb on - strand, within AO356_17065at 3842.916 kb on - strand, within AO356_17065at 3843.409 kb on + strand, within AO356_17070at 3843.409 kb on + strand, within AO356_17070at 3843.490 kb on + strand, within AO356_17070at 3843.491 kb on - strand, within AO356_17070at 3843.732 kb on + strand, within AO356_17070

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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3,842,452 - +0.8
3,842,456 + -1.7
3,842,457 - -1.0
3,842,457 - +1.8
3,842,457 - -0.2
3,842,457 - +0.8
3,842,457 - +0.9
3,842,484 + -0.4
3,842,484 + -0.9
3,842,484 + +1.2
3,842,488 + -0.8
3,842,488 + -1.2
3,842,488 + -0.6
3,842,488 + -0.1
3,842,488 + -0.0
3,842,488 + +0.1
3,842,489 - +0.9
3,842,489 - +1.1
3,842,489 - +0.4
3,842,489 - +2.9
3,842,489 - +0.8
3,842,536 + +0.7
3,842,550 + +0.4
3,842,554 + +0.4
3,842,557 + +1.4
3,842,570 + +2.0
3,842,570 + +0.0
3,842,903 - AO356_17065 0.51 -0.5
3,842,916 - AO356_17065 0.53 +1.4
3,842,916 - AO356_17065 0.53 +1.4
3,842,916 - AO356_17065 0.53 +1.4
3,843,409 + AO356_17070 0.18 +2.7
3,843,409 + AO356_17070 0.18 -1.0
3,843,490 + AO356_17070 0.24 +2.4
3,843,491 - AO356_17070 0.24 +0.4
3,843,732 + AO356_17070 0.44 +1.4

Or see this region's nucleotide sequence