Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_16345 and AO356_16350 overlap by 11 nucleotides AO356_16350 and AO356_16355 are separated by 191 nucleotides
AO356_16345: AO356_16345 - alkylhalidase, at 3,694,575 to 3,696,287
_16345
AO356_16350: AO356_16350 - hypothetical protein, at 3,696,277 to 3,696,834
_16350
AO356_16355: AO356_16355 - hypothetical protein, at 3,697,026 to 3,698,300
_16355
Position (kb)
3696
3697 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3695.322 kb on + strand, within AO356_16345 at 3695.415 kb on + strand, within AO356_16345 at 3695.415 kb on + strand, within AO356_16345 at 3695.416 kb on - strand, within AO356_16345 at 3695.416 kb on - strand, within AO356_16345 at 3695.427 kb on + strand, within AO356_16345 at 3695.427 kb on + strand, within AO356_16345 at 3695.427 kb on + strand, within AO356_16345 at 3695.427 kb on + strand, within AO356_16345 at 3695.428 kb on - strand, within AO356_16345 at 3695.428 kb on - strand, within AO356_16345 at 3695.428 kb on - strand, within AO356_16345 at 3695.428 kb on - strand, within AO356_16345 at 3695.547 kb on + strand, within AO356_16345 at 3695.548 kb on - strand, within AO356_16345 at 3695.592 kb on + strand, within AO356_16345 at 3695.592 kb on + strand, within AO356_16345 at 3695.592 kb on + strand, within AO356_16345 at 3695.593 kb on - strand, within AO356_16345 at 3695.604 kb on + strand, within AO356_16345 at 3695.604 kb on + strand, within AO356_16345 at 3695.604 kb on + strand, within AO356_16345 at 3695.604 kb on + strand, within AO356_16345 at 3695.616 kb on + strand, within AO356_16345 at 3695.616 kb on + strand, within AO356_16345 at 3695.616 kb on + strand, within AO356_16345 at 3695.616 kb on + strand, within AO356_16345 at 3695.616 kb on + strand, within AO356_16345 at 3695.616 kb on + strand, within AO356_16345 at 3695.616 kb on + strand, within AO356_16345 at 3695.616 kb on + strand, within AO356_16345 at 3695.616 kb on + strand, within AO356_16345 at 3695.617 kb on - strand, within AO356_16345 at 3695.617 kb on - strand, within AO356_16345 at 3695.617 kb on - strand, within AO356_16345 at 3695.617 kb on - strand, within AO356_16345 at 3695.617 kb on - strand, within AO356_16345 at 3695.649 kb on + strand, within AO356_16345 at 3695.649 kb on + strand, within AO356_16345 at 3695.650 kb on - strand, within AO356_16345 at 3695.879 kb on + strand, within AO356_16345 at 3695.880 kb on - strand, within AO356_16345 at 3696.057 kb on + strand, within AO356_16345 at 3696.057 kb on + strand, within AO356_16345 at 3696.057 kb on + strand, within AO356_16345 at 3696.057 kb on + strand, within AO356_16345 at 3696.058 kb on - strand, within AO356_16345 at 3696.058 kb on - strand, within AO356_16345 at 3696.058 kb on - strand, within AO356_16345 at 3696.058 kb on - strand, within AO356_16345 at 3696.058 kb on - strand, within AO356_16345 at 3696.058 kb on - strand, within AO356_16345 at 3696.099 kb on + strand, within AO356_16345 at 3696.099 kb on + strand, within AO356_16345 at 3696.100 kb on - strand, within AO356_16345 at 3696.100 kb on - strand, within AO356_16345 at 3696.118 kb on - strand at 3696.265 kb on + strand at 3696.265 kb on + strand at 3696.266 kb on - strand at 3696.266 kb on - strand at 3696.266 kb on - strand at 3696.266 kb on - strand at 3696.276 kb on + strand at 3696.276 kb on + strand at 3696.277 kb on - strand at 3696.283 kb on + strand at 3696.283 kb on + strand at 3696.283 kb on + strand at 3696.283 kb on + strand at 3696.283 kb on + strand at 3696.284 kb on - strand at 3696.284 kb on - strand at 3696.691 kb on + strand, within AO356_16350 at 3696.691 kb on + strand, within AO356_16350 at 3696.691 kb on + strand, within AO356_16350 at 3696.691 kb on + strand, within AO356_16350 at 3696.691 kb on + strand, within AO356_16350 at 3696.691 kb on + strand, within AO356_16350 at 3696.692 kb on - strand, within AO356_16350 at 3696.793 kb on + strand at 3696.794 kb on - strand at 3696.870 kb on - strand at 3696.896 kb on + strand at 3696.896 kb on + strand at 3696.896 kb on + strand at 3696.896 kb on + strand at 3696.896 kb on + strand at 3696.896 kb on + strand at 3696.896 kb on + strand at 3696.896 kb on + strand at 3696.896 kb on + strand at 3696.896 kb on + strand at 3696.896 kb on + strand at 3696.896 kb on + strand at 3696.897 kb on - strand at 3696.897 kb on - strand at 3696.897 kb on - strand at 3696.897 kb on - strand at 3696.897 kb on - strand at 3696.897 kb on - strand at 3696.897 kb on - strand at 3696.897 kb on - strand at 3696.897 kb on - strand at 3696.897 kb on - strand at 3696.897 kb on - strand at 3696.897 kb on - strand at 3696.905 kb on + strand at 3696.905 kb on + strand at 3696.905 kb on + strand at 3696.906 kb on - strand at 3696.906 kb on - strand at 3696.906 kb on - strand at 3696.906 kb on - strand at 3696.906 kb on - strand at 3696.906 kb on - strand at 3696.906 kb on - strand at 3697.089 kb on + strand at 3697.089 kb on + strand at 3697.090 kb on - strand at 3697.236 kb on + strand, within AO356_16355 at 3697.236 kb on + strand, within AO356_16355 at 3697.236 kb on + strand, within AO356_16355 at 3697.236 kb on + strand, within AO356_16355 at 3697.237 kb on - strand, within AO356_16355 at 3697.318 kb on + strand, within AO356_16355 at 3697.319 kb on - strand, within AO356_16355 at 3697.329 kb on + strand, within AO356_16355 at 3697.329 kb on + strand, within AO356_16355 at 3697.329 kb on + strand, within AO356_16355 at 3697.360 kb on + strand, within AO356_16355 at 3697.361 kb on - strand, within AO356_16355 at 3697.375 kb on + strand, within AO356_16355 at 3697.375 kb on + strand, within AO356_16355 at 3697.375 kb on + strand, within AO356_16355 at 3697.375 kb on + strand, within AO356_16355 at 3697.375 kb on + strand, within AO356_16355 at 3697.375 kb on + strand, within AO356_16355 at 3697.375 kb on + strand, within AO356_16355 at 3697.376 kb on - strand, within AO356_16355 at 3697.376 kb on - strand, within AO356_16355 at 3697.376 kb on - strand, within AO356_16355 at 3697.376 kb on - strand, within AO356_16355 at 3697.376 kb on - strand, within AO356_16355 at 3697.376 kb on - strand, within AO356_16355 at 3697.376 kb on - strand, within AO356_16355 at 3697.376 kb on - strand, within AO356_16355 at 3697.376 kb on - strand, within AO356_16355 at 3697.376 kb on - strand, within AO356_16355 at 3697.376 kb on - strand, within AO356_16355 at 3697.376 kb on - strand, within AO356_16355 at 3697.376 kb on - strand, within AO356_16355 at 3697.692 kb on + strand, within AO356_16355 at 3697.750 kb on - strand, within AO356_16355 at 3697.750 kb on - strand, within AO356_16355 at 3697.781 kb on + strand, within AO356_16355 at 3697.781 kb on + strand, within AO356_16355 at 3697.781 kb on + strand, within AO356_16355 at 3697.781 kb on + strand, within AO356_16355 at 3697.782 kb on - strand, within AO356_16355 at 3697.782 kb on - strand, within AO356_16355 at 3697.782 kb on - strand, within AO356_16355
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 3,695,322 + AO356_16345 0.44 +0.4 3,695,415 + AO356_16345 0.49 +0.7 3,695,415 + AO356_16345 0.49 +0.6 3,695,416 - AO356_16345 0.49 -0.2 3,695,416 - AO356_16345 0.49 -0.2 3,695,427 + AO356_16345 0.50 +0.4 3,695,427 + AO356_16345 0.50 +1.0 3,695,427 + AO356_16345 0.50 +1.4 3,695,427 + AO356_16345 0.50 +0.5 3,695,428 - AO356_16345 0.50 -0.2 3,695,428 - AO356_16345 0.50 -0.4 3,695,428 - AO356_16345 0.50 +0.1 3,695,428 - AO356_16345 0.50 -0.1 3,695,547 + AO356_16345 0.57 -0.3 3,695,548 - AO356_16345 0.57 -0.5 3,695,592 + AO356_16345 0.59 +0.0 3,695,592 + AO356_16345 0.59 -0.1 3,695,592 + AO356_16345 0.59 -0.8 3,695,593 - AO356_16345 0.59 -0.4 3,695,604 + AO356_16345 0.60 -0.1 3,695,604 + AO356_16345 0.60 +0.7 3,695,604 + AO356_16345 0.60 +0.9 3,695,604 + AO356_16345 0.60 -0.1 3,695,616 + AO356_16345 0.61 +0.8 3,695,616 + AO356_16345 0.61 -0.3 3,695,616 + AO356_16345 0.61 +0.3 3,695,616 + AO356_16345 0.61 +0.3 3,695,616 + AO356_16345 0.61 -0.3 3,695,616 + AO356_16345 0.61 -1.9 3,695,616 + AO356_16345 0.61 -0.0 3,695,616 + AO356_16345 0.61 -0.1 3,695,616 + AO356_16345 0.61 -1.8 3,695,617 - AO356_16345 0.61 +1.1 3,695,617 - AO356_16345 0.61 -0.4 3,695,617 - AO356_16345 0.61 +0.5 3,695,617 - AO356_16345 0.61 +0.5 3,695,617 - AO356_16345 0.61 -0.4 3,695,649 + AO356_16345 0.63 +0.1 3,695,649 + AO356_16345 0.63 -1.0 3,695,650 - AO356_16345 0.63 +0.1 3,695,879 + AO356_16345 0.76 +0.3 3,695,880 - AO356_16345 0.76 -0.7 3,696,057 + AO356_16345 0.87 -0.3 3,696,057 + AO356_16345 0.87 +0.5 3,696,057 + AO356_16345 0.87 +0.8 3,696,057 + AO356_16345 0.87 +0.4 3,696,058 - AO356_16345 0.87 -0.1 3,696,058 - AO356_16345 0.87 -1.4 3,696,058 - AO356_16345 0.87 -0.1 3,696,058 - AO356_16345 0.87 +1.7 3,696,058 - AO356_16345 0.87 +0.5 3,696,058 - AO356_16345 0.87 +1.3 3,696,099 + AO356_16345 0.89 +0.1 3,696,099 + AO356_16345 0.89 -0.7 3,696,100 - AO356_16345 0.89 +0.1 3,696,100 - AO356_16345 0.89 +0.4 3,696,118 - +0.7 3,696,265 + -0.6 3,696,265 + -0.6 3,696,266 - +0.7 3,696,266 - -0.6 3,696,266 - +0.9 3,696,266 - +0.5 3,696,276 + +2.2 3,696,276 + +0.1 3,696,277 - -0.9 3,696,283 + -0.4 3,696,283 + +0.0 3,696,283 + -0.2 3,696,283 + -0.2 3,696,283 + +0.5 3,696,284 - +0.7 3,696,284 - +0.2 3,696,691 + AO356_16350 0.74 +0.0 3,696,691 + AO356_16350 0.74 +0.8 3,696,691 + AO356_16350 0.74 +0.4 3,696,691 + AO356_16350 0.74 +0.2 3,696,691 + AO356_16350 0.74 +1.3 3,696,691 + AO356_16350 0.74 +0.2 3,696,692 - AO356_16350 0.74 +0.2 3,696,793 + -0.1 3,696,794 - -0.2 3,696,870 - +0.9 3,696,896 + +1.2 3,696,896 + +0.8 3,696,896 + +0.1 3,696,896 + +0.3 3,696,896 + -1.8 3,696,896 + +0.0 3,696,896 + -1.4 3,696,896 + +0.1 3,696,896 + +1.1 3,696,896 + +0.3 3,696,896 + -0.2 3,696,896 + +0.9 3,696,897 - +0.3 3,696,897 - +0.1 3,696,897 - -0.3 3,696,897 - +0.4 3,696,897 - +0.4 3,696,897 - +0.6 3,696,897 - -1.2 3,696,897 - +0.5 3,696,897 - -0.2 3,696,897 - -0.1 3,696,897 - -1.1 3,696,897 - +0.7 3,696,905 + -0.2 3,696,905 + -0.1 3,696,905 + +0.2 3,696,906 - -0.4 3,696,906 - -0.9 3,696,906 - +0.3 3,696,906 - -0.1 3,696,906 - -1.1 3,696,906 - -0.2 3,696,906 - +0.5 3,697,089 + +0.6 3,697,089 + -0.7 3,697,090 - -1.9 3,697,236 + AO356_16355 0.16 -1.3 3,697,236 + AO356_16355 0.16 +0.8 3,697,236 + AO356_16355 0.16 -1.3 3,697,236 + AO356_16355 0.16 -0.9 3,697,237 - AO356_16355 0.17 +0.4 3,697,318 + AO356_16355 0.23 -0.0 3,697,319 - AO356_16355 0.23 +0.1 3,697,329 + AO356_16355 0.24 +0.1 3,697,329 + AO356_16355 0.24 +0.5 3,697,329 + AO356_16355 0.24 -0.4 3,697,360 + AO356_16355 0.26 +0.4 3,697,361 - AO356_16355 0.26 +0.7 3,697,375 + AO356_16355 0.27 +0.7 3,697,375 + AO356_16355 0.27 -0.3 3,697,375 + AO356_16355 0.27 +0.2 3,697,375 + AO356_16355 0.27 +0.3 3,697,375 + AO356_16355 0.27 -0.6 3,697,375 + AO356_16355 0.27 -0.2 3,697,375 + AO356_16355 0.27 +1.1 3,697,376 - AO356_16355 0.27 +0.1 3,697,376 - AO356_16355 0.27 -1.2 3,697,376 - AO356_16355 0.27 +0.7 3,697,376 - AO356_16355 0.27 +0.3 3,697,376 - AO356_16355 0.27 +0.6 3,697,376 - AO356_16355 0.27 -0.0 3,697,376 - AO356_16355 0.27 +0.6 3,697,376 - AO356_16355 0.27 +0.2 3,697,376 - AO356_16355 0.27 -0.2 3,697,376 - AO356_16355 0.27 +0.2 3,697,376 - AO356_16355 0.27 -0.3 3,697,376 - AO356_16355 0.27 +0.1 3,697,376 - AO356_16355 0.27 -0.4 3,697,692 + AO356_16355 0.52 +0.8 3,697,750 - AO356_16355 0.57 +0.5 3,697,750 - AO356_16355 0.57 +0.2 3,697,781 + AO356_16355 0.59 -0.3 3,697,781 + AO356_16355 0.59 -1.1 3,697,781 + AO356_16355 0.59 -0.2 3,697,781 + AO356_16355 0.59 +0.2 3,697,782 - AO356_16355 0.59 -0.7 3,697,782 - AO356_16355 0.59 +0.8 3,697,782 - AO356_16355 0.59 +0.4
Or see this region's nucleotide sequence