Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_15160

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_15155 and AO356_15160 are separated by 603 nucleotidesAO356_15160 and AO356_15165 are separated by 657 nucleotides AO356_15155: AO356_15155 - sucrase, at 3,433,761 to 3,435,035 _15155 AO356_15160: AO356_15160 - hypothetical protein, at 3,435,639 to 3,435,998 _15160 AO356_15165: AO356_15165 - protein cII, at 3,436,656 to 3,437,309 _15165 Position (kb) 3435 3436Strain fitness (log2 ratio) -2 -1 0 1at 3434.673 kb on + strand, within AO356_15155at 3434.673 kb on + strand, within AO356_15155at 3434.673 kb on + strand, within AO356_15155at 3434.673 kb on + strand, within AO356_15155at 3434.673 kb on + strand, within AO356_15155at 3434.674 kb on - strand, within AO356_15155at 3434.674 kb on - strand, within AO356_15155at 3434.674 kb on - strand, within AO356_15155at 3434.674 kb on - strand, within AO356_15155at 3434.674 kb on - strand, within AO356_15155at 3434.674 kb on - strand, within AO356_15155at 3434.676 kb on + strand, within AO356_15155at 3434.676 kb on + strand, within AO356_15155at 3434.676 kb on + strand, within AO356_15155at 3434.677 kb on - strand, within AO356_15155at 3434.706 kb on + strand, within AO356_15155at 3434.706 kb on + strand, within AO356_15155at 3434.706 kb on + strand, within AO356_15155at 3434.739 kb on + strand, within AO356_15155at 3434.739 kb on + strand, within AO356_15155at 3434.740 kb on - strand, within AO356_15155at 3434.772 kb on + strand, within AO356_15155at 3434.772 kb on + strand, within AO356_15155at 3434.773 kb on - strand, within AO356_15155at 3434.773 kb on - strand, within AO356_15155at 3434.835 kb on + strand, within AO356_15155at 3434.835 kb on + strand, within AO356_15155at 3434.835 kb on + strand, within AO356_15155at 3434.835 kb on + strand, within AO356_15155at 3434.835 kb on + strand, within AO356_15155at 3434.844 kb on + strand, within AO356_15155at 3434.844 kb on + strand, within AO356_15155at 3434.844 kb on + strand, within AO356_15155at 3434.844 kb on + strand, within AO356_15155at 3434.845 kb on - strand, within AO356_15155at 3434.845 kb on - strand, within AO356_15155at 3434.956 kb on + strandat 3434.988 kb on + strandat 3434.988 kb on + strandat 3434.994 kb on + strandat 3434.994 kb on + strandat 3434.995 kb on - strandat 3435.000 kb on + strandat 3435.000 kb on + strandat 3435.000 kb on + strandat 3435.000 kb on + strandat 3435.000 kb on + strandat 3435.000 kb on + strandat 3435.000 kb on + strandat 3435.000 kb on + strandat 3435.000 kb on + strandat 3435.001 kb on - strandat 3435.001 kb on - strandat 3435.001 kb on - strandat 3435.001 kb on - strandat 3435.001 kb on - strandat 3435.001 kb on - strandat 3435.001 kb on - strandat 3435.023 kb on + strandat 3435.029 kb on + strandat 3435.029 kb on + strandat 3435.029 kb on + strandat 3435.029 kb on + strandat 3435.030 kb on - strandat 3435.030 kb on - strandat 3435.030 kb on - strandat 3435.033 kb on + strandat 3435.033 kb on + strandat 3435.033 kb on + strandat 3435.033 kb on + strandat 3435.034 kb on - strandat 3435.034 kb on - strandat 3435.034 kb on - strandat 3435.036 kb on + strandat 3435.036 kb on + strandat 3435.036 kb on + strandat 3435.036 kb on + strandat 3435.093 kb on + strandat 3435.104 kb on + strandat 3435.105 kb on - strandat 3435.118 kb on + strandat 3435.119 kb on - strandat 3435.119 kb on - strandat 3435.119 kb on - strandat 3435.159 kb on + strandat 3435.159 kb on + strandat 3435.159 kb on + strandat 3435.159 kb on + strandat 3435.160 kb on - strandat 3435.160 kb on - strandat 3435.220 kb on + strandat 3435.220 kb on + strandat 3435.220 kb on + strandat 3435.220 kb on + strandat 3435.220 kb on + strandat 3435.220 kb on + strandat 3435.220 kb on + strandat 3435.220 kb on + strandat 3435.221 kb on - strandat 3435.221 kb on - strandat 3435.221 kb on - strandat 3435.221 kb on - strandat 3435.221 kb on - strandat 3435.221 kb on - strandat 3435.221 kb on - strandat 3435.221 kb on - strandat 3435.224 kb on + strandat 3435.224 kb on + strandat 3435.224 kb on + strandat 3435.224 kb on + strandat 3435.224 kb on + strandat 3435.224 kb on + strandat 3435.224 kb on + strandat 3435.224 kb on + strandat 3435.224 kb on + strandat 3435.224 kb on + strandat 3435.225 kb on - strandat 3435.225 kb on - strandat 3435.225 kb on - strandat 3435.225 kb on - strandat 3435.225 kb on - strandat 3435.225 kb on - strandat 3435.225 kb on - strandat 3435.296 kb on - strandat 3435.314 kb on + strandat 3435.347 kb on + strandat 3435.347 kb on + strandat 3435.347 kb on + strandat 3435.348 kb on - strandat 3435.348 kb on - strandat 3435.353 kb on + strandat 3435.353 kb on + strandat 3435.353 kb on + strandat 3435.354 kb on - strandat 3435.354 kb on - strandat 3435.396 kb on - strandat 3435.447 kb on + strandat 3435.447 kb on + strandat 3435.447 kb on + strandat 3435.448 kb on - strandat 3435.448 kb on - strandat 3435.448 kb on - strandat 3435.448 kb on - strandat 3435.449 kb on + strandat 3435.450 kb on - strandat 3435.481 kb on - strandat 3435.569 kb on + strandat 3435.570 kb on - strandat 3435.585 kb on + strandat 3435.585 kb on + strandat 3435.585 kb on + strandat 3435.586 kb on - strandat 3435.586 kb on - strandat 3435.626 kb on + strandat 3435.626 kb on + strandat 3435.626 kb on + strandat 3435.627 kb on - strandat 3435.627 kb on - strandat 3435.627 kb on - strandat 3435.627 kb on - strandat 3435.627 kb on - strandat 3435.627 kb on - strandat 3435.635 kb on + strandat 3435.636 kb on - strandat 3435.636 kb on - strandat 3435.704 kb on + strand, within AO356_15160at 3435.704 kb on + strand, within AO356_15160at 3435.996 kb on + strandat 3435.996 kb on + strandat 3435.996 kb on + strandat 3435.996 kb on + strandat 3435.997 kb on - strandat 3436.022 kb on + strandat 3436.022 kb on + strandat 3436.022 kb on + strandat 3436.057 kb on - strandat 3436.110 kb on + strandat 3436.110 kb on + strandat 3436.110 kb on + strandat 3436.111 kb on - strandat 3436.111 kb on - strandat 3436.111 kb on - strandat 3436.145 kb on + strandat 3436.148 kb on + strandat 3436.148 kb on + strandat 3436.148 kb on + strandat 3436.148 kb on + strandat 3436.148 kb on + strandat 3436.149 kb on - strandat 3436.149 kb on - strandat 3436.149 kb on - strandat 3436.168 kb on + strandat 3436.168 kb on + strandat 3436.168 kb on + strandat 3436.168 kb on + strandat 3436.168 kb on + strandat 3436.168 kb on + strandat 3436.168 kb on + strandat 3436.168 kb on + strandat 3436.168 kb on + strandat 3436.168 kb on + strandat 3436.168 kb on + strandat 3436.168 kb on + strandat 3436.169 kb on - strandat 3436.169 kb on - strandat 3436.169 kb on - strandat 3436.169 kb on - strandat 3436.169 kb on - strandat 3436.169 kb on - strandat 3436.169 kb on - strandat 3436.169 kb on - strandat 3436.169 kb on - strandat 3436.169 kb on - strandat 3436.169 kb on - strandat 3436.169 kb on - strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.170 kb on + strandat 3436.171 kb on - strandat 3436.171 kb on - strandat 3436.171 kb on - strandat 3436.171 kb on - strandat 3436.171 kb on - strandat 3436.171 kb on - strandat 3436.171 kb on - strandat 3436.171 kb on - strandat 3436.171 kb on - strandat 3436.171 kb on - strandat 3436.171 kb on - strandat 3436.171 kb on - strandat 3436.222 kb on + strandat 3436.323 kb on + strandat 3436.324 kb on - strandat 3436.324 kb on - strandat 3436.456 kb on + strandat 3436.457 kb on - strandat 3436.513 kb on + strandat 3436.513 kb on + strandat 3436.514 kb on - strandat 3436.517 kb on - strandat 3436.575 kb on + strandat 3436.585 kb on - strandat 3436.594 kb on + strandat 3436.594 kb on + strandat 3436.637 kb on + strandat 3436.638 kb on - strandat 3436.641 kb on + strandat 3436.850 kb on - strand, within AO356_15165

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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3,434,673 + AO356_15155 0.72 +0.1
3,434,673 + AO356_15155 0.72 +0.3
3,434,673 + AO356_15155 0.72 -0.6
3,434,673 + AO356_15155 0.72 -0.1
3,434,673 + AO356_15155 0.72 -0.3
3,434,674 - AO356_15155 0.72 +0.3
3,434,674 - AO356_15155 0.72 +1.5
3,434,674 - AO356_15155 0.72 +1.2
3,434,674 - AO356_15155 0.72 -0.2
3,434,674 - AO356_15155 0.72 +0.7
3,434,674 - AO356_15155 0.72 +1.5
3,434,676 + AO356_15155 0.72 +0.2
3,434,676 + AO356_15155 0.72 +0.0
3,434,676 + AO356_15155 0.72 +1.1
3,434,677 - AO356_15155 0.72 -0.7
3,434,706 + AO356_15155 0.74 +0.9
3,434,706 + AO356_15155 0.74 -0.1
3,434,706 + AO356_15155 0.74 +0.3
3,434,739 + AO356_15155 0.77 -1.1
3,434,739 + AO356_15155 0.77 +0.1
3,434,740 - AO356_15155 0.77 +0.8
3,434,772 + AO356_15155 0.79 +0.6
3,434,772 + AO356_15155 0.79 +0.7
3,434,773 - AO356_15155 0.79 -0.2
3,434,773 - AO356_15155 0.79 -0.3
3,434,835 + AO356_15155 0.84 -1.5
3,434,835 + AO356_15155 0.84 +0.8
3,434,835 + AO356_15155 0.84 +0.2
3,434,835 + AO356_15155 0.84 -0.2
3,434,835 + AO356_15155 0.84 -0.1
3,434,844 + AO356_15155 0.85 +0.9
3,434,844 + AO356_15155 0.85 -0.4
3,434,844 + AO356_15155 0.85 +1.2
3,434,844 + AO356_15155 0.85 -0.9
3,434,845 - AO356_15155 0.85 -0.7
3,434,845 - AO356_15155 0.85 +0.5
3,434,956 + -0.0
3,434,988 + +0.3
3,434,988 + -0.1
3,434,994 + +0.5
3,434,994 + +0.6
3,434,995 - +0.6
3,435,000 + +0.6
3,435,000 + +0.1
3,435,000 + -1.2
3,435,000 + +0.0
3,435,000 + +0.0
3,435,000 + +0.1
3,435,000 + +0.5
3,435,000 + +0.3
3,435,000 + -0.4
3,435,001 - +0.2
3,435,001 - +0.5
3,435,001 - +1.1
3,435,001 - +0.5
3,435,001 - +0.2
3,435,001 - -2.1
3,435,001 - -0.0
3,435,023 + -0.1
3,435,029 + -0.1
3,435,029 + -0.0
3,435,029 + +0.1
3,435,029 + -0.6
3,435,030 - +0.5
3,435,030 - -0.1
3,435,030 - -0.1
3,435,033 + +0.1
3,435,033 + -1.5
3,435,033 + -0.1
3,435,033 + -0.1
3,435,034 - +1.1
3,435,034 - +0.4
3,435,034 - +0.2
3,435,036 + +0.8
3,435,036 + +0.5
3,435,036 + +0.4
3,435,036 + -0.5
3,435,093 + +0.5
3,435,104 + -0.7
3,435,105 - +0.5
3,435,118 + -0.0
3,435,119 - +0.5
3,435,119 - +0.4
3,435,119 - +0.2
3,435,159 + -1.0
3,435,159 + -0.5
3,435,159 + -0.7
3,435,159 + +0.2
3,435,160 - -0.2
3,435,160 - -0.5
3,435,220 + +0.5
3,435,220 + -0.8
3,435,220 + +0.6
3,435,220 + +1.1
3,435,220 + +0.4
3,435,220 + +0.3
3,435,220 + +0.2
3,435,220 + +0.4
3,435,221 - -0.2
3,435,221 - +0.4
3,435,221 - -0.4
3,435,221 - +1.0
3,435,221 - -1.2
3,435,221 - -0.3
3,435,221 - -0.2
3,435,221 - -0.1
3,435,224 + -0.6
3,435,224 + +0.3
3,435,224 + +1.0
3,435,224 + +0.6
3,435,224 + +0.3
3,435,224 + +0.6
3,435,224 + +0.6
3,435,224 + -0.1
3,435,224 + +0.1
3,435,224 + +0.5
3,435,225 - -0.1
3,435,225 - -0.5
3,435,225 - -1.0
3,435,225 - +0.5
3,435,225 - -0.6
3,435,225 - -0.5
3,435,225 - +0.1
3,435,296 - +0.2
3,435,314 + +0.3
3,435,347 + -1.8
3,435,347 + -0.5
3,435,347 + -0.9
3,435,348 - +0.2
3,435,348 - -0.7
3,435,353 + -0.9
3,435,353 + +0.4
3,435,353 + +0.6
3,435,354 - +0.5
3,435,354 - +0.3
3,435,396 - +0.8
3,435,447 + -0.4
3,435,447 + -0.0
3,435,447 + -0.5
3,435,448 - +0.7
3,435,448 - -0.6
3,435,448 - -0.4
3,435,448 - +0.3
3,435,449 + +0.0
3,435,450 - -0.2
3,435,481 - -0.3
3,435,569 + +0.9
3,435,570 - -0.3
3,435,585 + -1.5
3,435,585 + -1.8
3,435,585 + -1.3
3,435,586 - +0.3
3,435,586 - -0.0
3,435,626 + +0.4
3,435,626 + -0.3
3,435,626 + +0.8
3,435,627 - +0.4
3,435,627 - -1.1
3,435,627 - +0.5
3,435,627 - +0.3
3,435,627 - -0.1
3,435,627 - -0.5
3,435,635 + -0.3
3,435,636 - +0.1
3,435,636 - +0.2
3,435,704 + AO356_15160 0.18 -0.6
3,435,704 + AO356_15160 0.18 -0.7
3,435,996 + -0.7
3,435,996 + -0.1
3,435,996 + -0.6
3,435,996 + -0.3
3,435,997 - +0.9
3,436,022 + +0.2
3,436,022 + +0.4
3,436,022 + +0.6
3,436,057 - +0.0
3,436,110 + +0.3
3,436,110 + -0.2
3,436,110 + -0.0
3,436,111 - -0.3
3,436,111 - +0.7
3,436,111 - -0.0
3,436,145 + +0.6
3,436,148 + +0.1
3,436,148 + +0.3
3,436,148 + +1.5
3,436,148 + +0.8
3,436,148 + -2.5
3,436,149 - +0.6
3,436,149 - +0.2
3,436,149 - -0.4
3,436,168 + +0.2
3,436,168 + +0.6
3,436,168 + +0.8
3,436,168 + +0.4
3,436,168 + +1.0
3,436,168 + -0.5
3,436,168 + +0.0
3,436,168 + -0.3
3,436,168 + +0.4
3,436,168 + -0.8
3,436,168 + -1.0
3,436,168 + -0.3
3,436,169 - +0.5
3,436,169 - +0.2
3,436,169 - +0.4
3,436,169 - -0.5
3,436,169 - -0.7
3,436,169 - -0.2
3,436,169 - +0.6
3,436,169 - -1.0
3,436,169 - -0.3
3,436,169 - -0.5
3,436,169 - +1.2
3,436,169 - +1.1
3,436,170 + +1.1
3,436,170 + +0.1
3,436,170 + +0.0
3,436,170 + +0.3
3,436,170 + +0.9
3,436,170 + +1.3
3,436,170 + +0.4
3,436,170 + +0.7
3,436,170 + +0.1
3,436,170 + -0.3
3,436,170 + -0.0
3,436,170 + +1.5
3,436,170 + -0.5
3,436,170 + -0.5
3,436,170 + -0.4
3,436,170 + -0.6
3,436,170 + -0.3
3,436,171 - +1.5
3,436,171 - +0.1
3,436,171 - +0.4
3,436,171 - +0.4
3,436,171 - -0.1
3,436,171 - -0.5
3,436,171 - +0.2
3,436,171 - +0.3
3,436,171 - +0.1
3,436,171 - +1.7
3,436,171 - -1.0
3,436,171 - +0.7
3,436,222 + -0.3
3,436,323 + +0.0
3,436,324 - -1.1
3,436,324 - -1.7
3,436,456 + +0.5
3,436,457 - -1.5
3,436,513 + -0.9
3,436,513 + +0.1
3,436,514 - +0.2
3,436,517 - +0.7
3,436,575 + -0.5
3,436,585 - -0.9
3,436,594 + +0.8
3,436,594 + +0.5
3,436,637 + -1.2
3,436,638 - -0.9
3,436,641 + +0.1
3,436,850 - AO356_15165 0.30 -1.7

Or see this region's nucleotide sequence