Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_14500 and AO356_14505 are separated by 3 nucleotides AO356_14505 and AO356_14510 are separated by 212 nucleotides
AO356_14500: AO356_14500 - anhydro-N-acetylmuramic acid kinase, at 3,294,681 to 3,295,772
_14500
AO356_14505: AO356_14505 - peptidase M23, at 3,295,776 to 3,297,194
_14505
AO356_14510: AO356_14510 - tyrosine--tRNA ligase, at 3,297,407 to 3,298,606
_14510
Position (kb)
3295
3296
3297
3298 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3294.820 kb on + strand, within AO356_14500 at 3294.820 kb on + strand, within AO356_14500 at 3294.820 kb on + strand, within AO356_14500 at 3294.821 kb on - strand, within AO356_14500 at 3294.821 kb on - strand, within AO356_14500 at 3294.830 kb on + strand, within AO356_14500 at 3294.990 kb on + strand, within AO356_14500 at 3294.990 kb on + strand, within AO356_14500 at 3294.991 kb on - strand, within AO356_14500 at 3294.991 kb on - strand, within AO356_14500 at 3294.991 kb on - strand, within AO356_14500 at 3294.991 kb on - strand, within AO356_14500 at 3295.053 kb on + strand, within AO356_14500 at 3295.054 kb on - strand, within AO356_14500 at 3295.191 kb on + strand, within AO356_14500 at 3295.191 kb on + strand, within AO356_14500 at 3295.191 kb on + strand, within AO356_14500 at 3295.192 kb on - strand, within AO356_14500 at 3295.192 kb on - strand, within AO356_14500 at 3295.192 kb on - strand, within AO356_14500 at 3295.192 kb on - strand, within AO356_14500 at 3295.192 kb on - strand, within AO356_14500 at 3295.257 kb on + strand, within AO356_14500 at 3295.257 kb on + strand, within AO356_14500 at 3295.258 kb on - strand, within AO356_14500 at 3295.258 kb on - strand, within AO356_14500 at 3295.258 kb on - strand, within AO356_14500 at 3295.304 kb on + strand, within AO356_14500 at 3295.305 kb on - strand, within AO356_14500 at 3295.455 kb on - strand, within AO356_14500 at 3295.548 kb on - strand, within AO356_14500 at 3295.638 kb on + strand, within AO356_14500 at 3295.639 kb on - strand, within AO356_14500 at 3295.639 kb on - strand, within AO356_14500 at 3295.672 kb on + strand at 3295.672 kb on + strand at 3295.672 kb on + strand at 3295.672 kb on + strand at 3295.673 kb on - strand at 3295.673 kb on - strand at 3295.673 kb on - strand at 3295.673 kb on - strand at 3295.673 kb on - strand at 3295.673 kb on - strand at 3295.673 kb on - strand at 3295.673 kb on - strand at 3295.673 kb on - strand at 3295.673 kb on - strand at 3295.762 kb on + strand at 3295.762 kb on + strand at 3295.762 kb on + strand at 3295.762 kb on + strand at 3295.762 kb on + strand at 3295.762 kb on + strand at 3295.762 kb on + strand at 3295.762 kb on + strand at 3295.762 kb on + strand at 3295.763 kb on - strand at 3295.763 kb on - strand at 3295.763 kb on - strand at 3295.763 kb on - strand at 3295.763 kb on - strand at 3295.763 kb on - strand at 3295.763 kb on - strand at 3295.763 kb on - strand at 3295.763 kb on - strand at 3295.942 kb on + strand, within AO356_14505 at 3295.985 kb on - strand, within AO356_14505 at 3296.069 kb on - strand, within AO356_14505 at 3296.359 kb on + strand, within AO356_14505 at 3296.440 kb on + strand, within AO356_14505 at 3296.590 kb on + strand, within AO356_14505 at 3297.114 kb on + strand at 3297.194 kb on + strand at 3297.195 kb on - strand at 3297.195 kb on - strand at 3297.195 kb on - strand at 3297.199 kb on - strand at 3297.199 kb on - strand at 3297.199 kb on - strand at 3297.199 kb on - strand at 3297.347 kb on + strand at 3297.347 kb on + strand at 3297.347 kb on + strand at 3297.347 kb on + strand at 3297.347 kb on + strand at 3297.347 kb on + strand at 3297.366 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 3,294,820 + AO356_14500 0.13 +1.0 3,294,820 + AO356_14500 0.13 -0.7 3,294,820 + AO356_14500 0.13 +1.3 3,294,821 - AO356_14500 0.13 -0.1 3,294,821 - AO356_14500 0.13 -0.3 3,294,830 + AO356_14500 0.14 +0.5 3,294,990 + AO356_14500 0.28 +2.0 3,294,990 + AO356_14500 0.28 -2.1 3,294,991 - AO356_14500 0.28 +1.5 3,294,991 - AO356_14500 0.28 -0.1 3,294,991 - AO356_14500 0.28 -0.3 3,294,991 - AO356_14500 0.28 -0.1 3,295,053 + AO356_14500 0.34 -0.7 3,295,054 - AO356_14500 0.34 -0.1 3,295,191 + AO356_14500 0.47 +2.5 3,295,191 + AO356_14500 0.47 +0.3 3,295,191 + AO356_14500 0.47 +0.5 3,295,192 - AO356_14500 0.47 +0.7 3,295,192 - AO356_14500 0.47 -0.3 3,295,192 - AO356_14500 0.47 -2.2 3,295,192 - AO356_14500 0.47 +0.5 3,295,192 - AO356_14500 0.47 +0.1 3,295,257 + AO356_14500 0.53 +1.5 3,295,257 + AO356_14500 0.53 +0.5 3,295,258 - AO356_14500 0.53 -0.3 3,295,258 - AO356_14500 0.53 -0.0 3,295,258 - AO356_14500 0.53 +0.3 3,295,304 + AO356_14500 0.57 -2.0 3,295,305 - AO356_14500 0.57 +0.0 3,295,455 - AO356_14500 0.71 -0.8 3,295,548 - AO356_14500 0.79 -1.2 3,295,638 + AO356_14500 0.88 -0.1 3,295,639 - AO356_14500 0.88 -0.4 3,295,639 - AO356_14500 0.88 -0.0 3,295,672 + +0.1 3,295,672 + -0.4 3,295,672 + +0.4 3,295,672 + +0.6 3,295,673 - +0.1 3,295,673 - -0.5 3,295,673 - -0.1 3,295,673 - +0.3 3,295,673 - -0.9 3,295,673 - +0.9 3,295,673 - +0.9 3,295,673 - -0.6 3,295,673 - +0.6 3,295,673 - +0.8 3,295,762 + -0.6 3,295,762 + -0.9 3,295,762 + -0.4 3,295,762 + +0.8 3,295,762 + -0.9 3,295,762 + +0.8 3,295,762 + +0.1 3,295,762 + -1.5 3,295,762 + +0.3 3,295,763 - -0.4 3,295,763 - -0.6 3,295,763 - -0.4 3,295,763 - -0.7 3,295,763 - -0.1 3,295,763 - +0.4 3,295,763 - -0.5 3,295,763 - +0.1 3,295,763 - +0.5 3,295,942 + AO356_14505 0.12 -0.6 3,295,985 - AO356_14505 0.15 +0.9 3,296,069 - AO356_14505 0.21 -0.1 3,296,359 + AO356_14505 0.41 -1.3 3,296,440 + AO356_14505 0.47 -1.1 3,296,590 + AO356_14505 0.57 -0.8 3,297,114 + +1.5 3,297,194 + -1.3 3,297,195 - -0.9 3,297,195 - +0.1 3,297,195 - -1.2 3,297,199 - -0.5 3,297,199 - -2.2 3,297,199 - +0.3 3,297,199 - -1.8 3,297,347 + +0.1 3,297,347 + -0.8 3,297,347 + -0.1 3,297,347 + +0.3 3,297,347 + -1.6 3,297,347 + -0.3 3,297,366 + +0.5
Or see this region's nucleotide sequence