Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_14325 and AO356_14330 overlap by 1 nucleotides AO356_14330 and AO356_14335 are separated by 116 nucleotides AO356_14335 and AO356_14340 overlap by 4 nucleotides AO356_14340 and AO356_14345 overlap by 4 nucleotides
AO356_14325: AO356_14325 - diadenosine tetraphosphatase, at 3,257,868 to 3,258,743
_14325
AO356_14330: AO356_14330 - magnesium transporter ApaG, at 3,258,743 to 3,259,123
_14330
AO356_14335: AO356_14335 - rRNA methyltransferase, at 3,259,240 to 3,260,058
_14335
AO356_14340: AO356_14340 - 4-hydroxythreonine-4-phosphate dehydrogenase, at 3,260,055 to 3,261,044
_14340
AO356_14345: AO356_14345 - molecular chaperone SurA, at 3,261,041 to 3,262,321
_14345
Position (kb)
3259
3260
3261 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3258.734 kb on - strand at 3258.734 kb on - strand at 3258.826 kb on - strand, within AO356_14330 at 3258.826 kb on - strand, within AO356_14330 at 3258.826 kb on - strand, within AO356_14330 at 3258.826 kb on - strand, within AO356_14330 at 3258.826 kb on - strand, within AO356_14330 at 3258.826 kb on - strand, within AO356_14330 at 3258.826 kb on - strand, within AO356_14330 at 3258.826 kb on - strand, within AO356_14330 at 3258.876 kb on + strand, within AO356_14330 at 3258.876 kb on + strand, within AO356_14330 at 3258.876 kb on + strand, within AO356_14330 at 3258.876 kb on + strand, within AO356_14330 at 3258.877 kb on - strand, within AO356_14330 at 3258.877 kb on - strand, within AO356_14330 at 3258.877 kb on - strand, within AO356_14330 at 3258.877 kb on - strand, within AO356_14330 at 3258.877 kb on - strand, within AO356_14330 at 3258.877 kb on - strand, within AO356_14330 at 3258.877 kb on - strand, within AO356_14330 at 3259.021 kb on + strand, within AO356_14330 at 3259.030 kb on - strand, within AO356_14330 at 3259.030 kb on - strand, within AO356_14330 at 3259.030 kb on - strand, within AO356_14330 at 3259.130 kb on - strand at 3259.130 kb on - strand at 3259.130 kb on - strand at 3259.130 kb on - strand at 3259.130 kb on - strand at 3259.130 kb on - strand at 3259.138 kb on - strand at 3259.179 kb on + strand at 3259.179 kb on + strand at 3259.180 kb on - strand at 3259.180 kb on - strand at 3259.180 kb on - strand at 3259.180 kb on - strand at 3259.188 kb on + strand at 3259.195 kb on + strand at 3259.198 kb on + strand at 3259.199 kb on - strand at 3259.199 kb on - strand at 3259.199 kb on - strand at 3259.214 kb on - strand at 3259.294 kb on + strand at 3259.327 kb on + strand, within AO356_14335 at 3259.328 kb on - strand, within AO356_14335 at 3259.484 kb on - strand, within AO356_14335 at 3259.484 kb on - strand, within AO356_14335 at 3259.572 kb on - strand, within AO356_14335 at 3259.721 kb on + strand, within AO356_14335 at 3259.722 kb on - strand, within AO356_14335 at 3259.722 kb on - strand, within AO356_14335 at 3259.722 kb on - strand, within AO356_14335 at 3259.722 kb on - strand, within AO356_14335 at 3259.770 kb on + strand, within AO356_14335 at 3260.045 kb on + strand at 3260.046 kb on - strand at 3260.058 kb on + strand at 3260.058 kb on + strand at 3260.059 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 3,258,734 - +0.1 3,258,734 - -0.8 3,258,826 - AO356_14330 0.22 +0.8 3,258,826 - AO356_14330 0.22 -0.2 3,258,826 - AO356_14330 0.22 +0.3 3,258,826 - AO356_14330 0.22 +0.4 3,258,826 - AO356_14330 0.22 -0.5 3,258,826 - AO356_14330 0.22 +0.5 3,258,826 - AO356_14330 0.22 -0.2 3,258,826 - AO356_14330 0.22 -0.3 3,258,876 + AO356_14330 0.35 +0.7 3,258,876 + AO356_14330 0.35 -0.5 3,258,876 + AO356_14330 0.35 +1.2 3,258,876 + AO356_14330 0.35 -0.1 3,258,877 - AO356_14330 0.35 +0.6 3,258,877 - AO356_14330 0.35 -0.5 3,258,877 - AO356_14330 0.35 +0.3 3,258,877 - AO356_14330 0.35 -0.1 3,258,877 - AO356_14330 0.35 +0.5 3,258,877 - AO356_14330 0.35 +0.2 3,258,877 - AO356_14330 0.35 -0.1 3,259,021 + AO356_14330 0.73 -1.5 3,259,030 - AO356_14330 0.75 -1.2 3,259,030 - AO356_14330 0.75 -0.7 3,259,030 - AO356_14330 0.75 +0.2 3,259,130 - +0.7 3,259,130 - +0.1 3,259,130 - -0.5 3,259,130 - +1.9 3,259,130 - +0.9 3,259,130 - -0.1 3,259,138 - -0.7 3,259,179 + -0.3 3,259,179 + +0.7 3,259,180 - -0.1 3,259,180 - -0.9 3,259,180 - +0.1 3,259,180 - -0.8 3,259,188 + -0.5 3,259,195 + +1.0 3,259,198 + -1.1 3,259,199 - +0.8 3,259,199 - +0.5 3,259,199 - +2.1 3,259,214 - -0.7 3,259,294 + +0.1 3,259,327 + AO356_14335 0.11 -1.0 3,259,328 - AO356_14335 0.11 -1.3 3,259,484 - AO356_14335 0.30 -0.7 3,259,484 - AO356_14335 0.30 +2.2 3,259,572 - AO356_14335 0.41 +0.1 3,259,721 + AO356_14335 0.59 -0.6 3,259,722 - AO356_14335 0.59 -0.7 3,259,722 - AO356_14335 0.59 +0.5 3,259,722 - AO356_14335 0.59 -0.8 3,259,722 - AO356_14335 0.59 -2.0 3,259,770 + AO356_14335 0.65 -1.0 3,260,045 + -0.2 3,260,046 - +2.0 3,260,058 + -0.7 3,260,058 + -1.0 3,260,059 - +0.5
Or see this region's nucleotide sequence