Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_13435 and AO356_13440 are separated by 249 nucleotides AO356_13440 and AO356_13445 are separated by 123 nucleotides AO356_13445 and AO356_13450 overlap by 4 nucleotides
AO356_13435: AO356_13435 - peptidase P60, at 3,046,925 to 3,047,536
_13435
AO356_13440: AO356_13440 - hypothetical protein, at 3,047,786 to 3,048,214
_13440
AO356_13445: AO356_13445 - dihydroorotase, at 3,048,338 to 3,049,609
_13445
AO356_13450: AO356_13450 - aspartate carbamoyltransferase catalytic subunit, at 3,049,606 to 3,050,610
_13450
Position (kb)
3048
3049
3050 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3047.436 kb on + strand, within AO356_13435 at 3047.436 kb on + strand, within AO356_13435 at 3047.436 kb on + strand, within AO356_13435 at 3047.495 kb on + strand at 3047.495 kb on + strand at 3047.495 kb on + strand at 3047.495 kb on + strand at 3047.495 kb on + strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.496 kb on - strand at 3047.498 kb on + strand at 3047.499 kb on - strand at 3047.538 kb on - strand at 3047.550 kb on + strand at 3047.550 kb on + strand at 3047.550 kb on + strand at 3047.551 kb on - strand at 3047.570 kb on + strand at 3047.570 kb on + strand at 3047.572 kb on + strand at 3047.572 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.623 kb on + strand at 3047.624 kb on - strand at 3047.624 kb on - strand at 3047.624 kb on - strand at 3047.624 kb on - strand at 3047.795 kb on + strand at 3047.796 kb on - strand at 3047.883 kb on - strand, within AO356_13440 at 3047.883 kb on - strand, within AO356_13440 at 3047.883 kb on - strand, within AO356_13440 at 3047.886 kb on - strand, within AO356_13440 at 3048.020 kb on + strand, within AO356_13440 at 3048.020 kb on + strand, within AO356_13440 at 3048.021 kb on - strand, within AO356_13440 at 3048.066 kb on + strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.067 kb on - strand, within AO356_13440 at 3048.077 kb on + strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.078 kb on - strand, within AO356_13440 at 3048.103 kb on + strand, within AO356_13440 at 3048.103 kb on + strand, within AO356_13440 at 3048.104 kb on - strand, within AO356_13440 at 3048.104 kb on - strand, within AO356_13440 at 3048.104 kb on - strand, within AO356_13440 at 3048.107 kb on + strand, within AO356_13440 at 3048.108 kb on - strand, within AO356_13440 at 3048.108 kb on - strand, within AO356_13440 at 3048.108 kb on - strand, within AO356_13440 at 3048.146 kb on + strand, within AO356_13440 at 3048.146 kb on + strand, within AO356_13440 at 3048.146 kb on + strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.147 kb on - strand, within AO356_13440 at 3048.184 kb on + strand at 3048.184 kb on + strand at 3048.184 kb on + strand at 3048.184 kb on + strand at 3048.185 kb on - strand at 3048.185 kb on - strand at 3048.212 kb on + strand at 3048.213 kb on - strand at 3048.230 kb on - strand at 3048.323 kb on - strand at 3048.375 kb on + strand at 3048.832 kb on - strand, within AO356_13445 at 3049.105 kb on - strand, within AO356_13445 at 3049.537 kb on + strand at 3049.695 kb on - strand at 3049.695 kb on - strand at 3049.947 kb on - strand, within AO356_13450 at 3049.962 kb on - strand, within AO356_13450
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 3,047,436 + AO356_13435 0.83 +1.2 3,047,436 + AO356_13435 0.83 -0.0 3,047,436 + AO356_13435 0.83 +0.5 3,047,495 + -0.5 3,047,495 + +0.9 3,047,495 + -0.8 3,047,495 + -0.6 3,047,495 + -1.6 3,047,496 - +2.1 3,047,496 - -0.2 3,047,496 - -0.6 3,047,496 - -1.8 3,047,496 - -0.2 3,047,496 - +0.3 3,047,496 - -0.2 3,047,496 - +0.3 3,047,498 + -0.8 3,047,499 - -0.2 3,047,538 - +0.2 3,047,550 + +0.7 3,047,550 + -0.9 3,047,550 + -0.1 3,047,551 - -0.7 3,047,570 + -0.5 3,047,570 + +0.7 3,047,572 + +1.2 3,047,572 + +0.6 3,047,623 + +0.5 3,047,623 + -0.6 3,047,623 + -0.2 3,047,623 + +0.3 3,047,623 + +0.8 3,047,623 + -1.1 3,047,623 + -0.9 3,047,624 - +0.3 3,047,624 - +1.2 3,047,624 - -1.1 3,047,624 - +0.1 3,047,795 + -0.8 3,047,796 - -0.4 3,047,883 - AO356_13440 0.23 -0.3 3,047,883 - AO356_13440 0.23 +0.3 3,047,883 - AO356_13440 0.23 -0.5 3,047,886 - AO356_13440 0.23 -0.2 3,048,020 + AO356_13440 0.55 +0.3 3,048,020 + AO356_13440 0.55 -0.3 3,048,021 - AO356_13440 0.55 +0.7 3,048,066 + AO356_13440 0.65 +0.1 3,048,067 - AO356_13440 0.66 +0.6 3,048,067 - AO356_13440 0.66 -0.2 3,048,067 - AO356_13440 0.66 +0.6 3,048,067 - AO356_13440 0.66 +0.5 3,048,067 - AO356_13440 0.66 -0.1 3,048,077 + AO356_13440 0.68 -0.3 3,048,078 - AO356_13440 0.68 +0.4 3,048,078 - AO356_13440 0.68 -1.0 3,048,078 - AO356_13440 0.68 -0.2 3,048,078 - AO356_13440 0.68 +0.8 3,048,078 - AO356_13440 0.68 -0.8 3,048,078 - AO356_13440 0.68 -2.1 3,048,103 + AO356_13440 0.74 -0.3 3,048,103 + AO356_13440 0.74 -0.7 3,048,104 - AO356_13440 0.74 +0.3 3,048,104 - AO356_13440 0.74 -0.6 3,048,104 - AO356_13440 0.74 +2.1 3,048,107 + AO356_13440 0.75 -0.1 3,048,108 - AO356_13440 0.75 -2.7 3,048,108 - AO356_13440 0.75 +0.6 3,048,108 - AO356_13440 0.75 -1.1 3,048,146 + AO356_13440 0.84 +1.0 3,048,146 + AO356_13440 0.84 -0.3 3,048,146 + AO356_13440 0.84 +0.1 3,048,147 - AO356_13440 0.84 +0.5 3,048,147 - AO356_13440 0.84 -0.9 3,048,147 - AO356_13440 0.84 -0.0 3,048,147 - AO356_13440 0.84 +0.9 3,048,147 - AO356_13440 0.84 +0.2 3,048,147 - AO356_13440 0.84 +0.0 3,048,184 + -0.5 3,048,184 + -0.0 3,048,184 + -0.5 3,048,184 + +0.3 3,048,185 - -0.6 3,048,185 - -0.4 3,048,212 + +0.7 3,048,213 - +0.1 3,048,230 - +1.0 3,048,323 - +0.1 3,048,375 + +1.5 3,048,832 - AO356_13445 0.39 +0.5 3,049,105 - AO356_13445 0.60 +1.1 3,049,537 + -0.5 3,049,695 - -0.2 3,049,695 - +0.2 3,049,947 - AO356_13450 0.34 -0.1 3,049,962 - AO356_13450 0.35 +0.2
Or see this region's nucleotide sequence