Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_12630 and AO356_12635 are separated by 128 nucleotides AO356_12635 and AO356_12640 are separated by 183 nucleotides AO356_12640 and AO356_12645 are separated by 135 nucleotides
AO356_12630: AO356_12630 - alanine racemase, at 2,877,673 to 2,878,746
_12630
AO356_12635: AO356_12635 - XRE family transcriptional regulator, at 2,878,875 to 2,879,423
_12635
AO356_12640: AO356_12640 - cytochrome C, at 2,879,607 to 2,880,029
_12640
AO356_12645: AO356_12645 - acetyl-CoA hydrolase, at 2,880,165 to 2,882,099
_12645
Position (kb)
2879
2880
2881 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2878.732 kb on + strand at 2878.732 kb on + strand at 2878.733 kb on - strand at 2878.733 kb on - strand at 2878.761 kb on + strand at 2878.805 kb on + strand at 2878.805 kb on + strand at 2878.805 kb on + strand at 2878.806 kb on - strand at 2878.806 kb on - strand at 2878.809 kb on + strand at 2878.809 kb on + strand at 2878.809 kb on + strand at 2878.809 kb on + strand at 2878.809 kb on + strand at 2878.810 kb on - strand at 2878.908 kb on - strand at 2878.908 kb on - strand at 2878.967 kb on + strand, within AO356_12635 at 2878.967 kb on + strand, within AO356_12635 at 2878.968 kb on - strand, within AO356_12635 at 2878.968 kb on - strand, within AO356_12635 at 2878.968 kb on - strand, within AO356_12635 at 2878.968 kb on - strand, within AO356_12635 at 2878.968 kb on - strand, within AO356_12635 at 2879.100 kb on + strand, within AO356_12635 at 2879.100 kb on + strand, within AO356_12635 at 2879.100 kb on + strand, within AO356_12635 at 2879.101 kb on - strand, within AO356_12635 at 2879.202 kb on + strand, within AO356_12635 at 2879.202 kb on + strand, within AO356_12635 at 2879.202 kb on + strand, within AO356_12635 at 2879.202 kb on + strand, within AO356_12635 at 2879.202 kb on + strand, within AO356_12635 at 2879.202 kb on + strand, within AO356_12635 at 2879.202 kb on + strand, within AO356_12635 at 2879.203 kb on - strand, within AO356_12635 at 2879.331 kb on + strand, within AO356_12635 at 2879.331 kb on + strand, within AO356_12635 at 2879.331 kb on + strand, within AO356_12635 at 2879.331 kb on + strand, within AO356_12635 at 2879.331 kb on + strand, within AO356_12635 at 2879.332 kb on - strand, within AO356_12635 at 2879.332 kb on - strand, within AO356_12635 at 2879.332 kb on - strand, within AO356_12635 at 2879.334 kb on + strand, within AO356_12635 at 2879.334 kb on + strand, within AO356_12635 at 2879.335 kb on - strand, within AO356_12635 at 2879.421 kb on + strand at 2879.531 kb on + strand at 2879.531 kb on + strand at 2879.532 kb on - strand at 2879.533 kb on + strand at 2879.533 kb on + strand at 2879.533 kb on + strand at 2879.533 kb on + strand at 2879.533 kb on + strand at 2879.534 kb on - strand at 2879.572 kb on + strand at 2879.590 kb on + strand at 2879.590 kb on + strand at 2879.590 kb on + strand at 2879.590 kb on + strand at 2879.591 kb on - strand at 2879.591 kb on - strand at 2879.602 kb on + strand at 2879.603 kb on - strand at 2879.603 kb on - strand at 2879.603 kb on - strand at 2879.603 kb on - strand at 2879.606 kb on + strand at 2879.741 kb on + strand, within AO356_12640 at 2879.806 kb on + strand, within AO356_12640 at 2879.807 kb on - strand, within AO356_12640 at 2879.807 kb on - strand, within AO356_12640 at 2879.961 kb on - strand, within AO356_12640 at 2880.027 kb on + strand at 2880.028 kb on - strand at 2880.031 kb on - strand at 2880.031 kb on - strand at 2880.031 kb on - strand at 2880.227 kb on + strand at 2880.227 kb on + strand at 2880.227 kb on + strand at 2880.227 kb on + strand at 2880.228 kb on - strand at 2880.228 kb on - strand at 2880.228 kb on - strand at 2880.228 kb on - strand at 2880.228 kb on - strand at 2880.228 kb on - strand at 2880.327 kb on + strand at 2880.327 kb on + strand at 2880.327 kb on + strand at 2880.327 kb on + strand at 2880.327 kb on + strand at 2880.327 kb on + strand at 2880.327 kb on + strand at 2880.327 kb on + strand at 2880.328 kb on - strand at 2880.328 kb on - strand at 2880.328 kb on - strand at 2880.328 kb on - strand at 2880.328 kb on - strand at 2880.328 kb on - strand at 2880.328 kb on - strand at 2880.417 kb on + strand, within AO356_12645 at 2880.432 kb on + strand, within AO356_12645 at 2880.432 kb on + strand, within AO356_12645 at 2880.432 kb on + strand, within AO356_12645 at 2880.433 kb on - strand, within AO356_12645 at 2880.433 kb on - strand, within AO356_12645 at 2880.537 kb on + strand, within AO356_12645 at 2880.537 kb on + strand, within AO356_12645 at 2880.537 kb on + strand, within AO356_12645 at 2880.537 kb on + strand, within AO356_12645 at 2880.537 kb on + strand, within AO356_12645 at 2880.538 kb on - strand, within AO356_12645 at 2880.538 kb on - strand, within AO356_12645 at 2880.538 kb on - strand, within AO356_12645 at 2880.538 kb on - strand, within AO356_12645 at 2880.538 kb on - strand, within AO356_12645 at 2880.538 kb on - strand, within AO356_12645 at 2880.538 kb on - strand, within AO356_12645 at 2880.538 kb on - strand, within AO356_12645 at 2880.552 kb on + strand, within AO356_12645 at 2880.552 kb on + strand, within AO356_12645 at 2880.552 kb on + strand, within AO356_12645 at 2880.552 kb on + strand, within AO356_12645 at 2880.552 kb on + strand, within AO356_12645 at 2880.552 kb on + strand, within AO356_12645 at 2880.552 kb on + strand, within AO356_12645 at 2880.552 kb on + strand, within AO356_12645 at 2880.552 kb on + strand, within AO356_12645 at 2880.553 kb on - strand, within AO356_12645 at 2880.553 kb on - strand, within AO356_12645 at 2880.553 kb on - strand, within AO356_12645 at 2880.553 kb on - strand, within AO356_12645 at 2880.553 kb on - strand, within AO356_12645 at 2880.553 kb on - strand, within AO356_12645 at 2880.553 kb on - strand, within AO356_12645 at 2880.553 kb on - strand, within AO356_12645 at 2880.553 kb on - strand, within AO356_12645 at 2880.553 kb on - strand, within AO356_12645 at 2880.753 kb on + strand, within AO356_12645 at 2880.753 kb on + strand, within AO356_12645 at 2880.753 kb on + strand, within AO356_12645 at 2880.753 kb on + strand, within AO356_12645 at 2880.753 kb on + strand, within AO356_12645 at 2880.753 kb on + strand, within AO356_12645 at 2880.753 kb on + strand, within AO356_12645 at 2880.753 kb on + strand, within AO356_12645 at 2880.753 kb on + strand, within AO356_12645 at 2880.753 kb on + strand, within AO356_12645 at 2880.754 kb on - strand, within AO356_12645 at 2880.754 kb on - strand, within AO356_12645 at 2880.754 kb on - strand, within AO356_12645 at 2880.754 kb on - strand, within AO356_12645 at 2880.754 kb on - strand, within AO356_12645 at 2880.754 kb on - strand, within AO356_12645 at 2880.754 kb on - strand, within AO356_12645 at 2880.871 kb on + strand, within AO356_12645 at 2880.872 kb on - strand, within AO356_12645 at 2881.017 kb on - strand, within AO356_12645
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 2,878,732 + +0.3 2,878,732 + +0.5 2,878,733 - +0.4 2,878,733 - -0.4 2,878,761 + +0.5 2,878,805 + -1.0 2,878,805 + +0.6 2,878,805 + +0.1 2,878,806 - +0.4 2,878,806 - +0.4 2,878,809 + -0.2 2,878,809 + -0.1 2,878,809 + -0.7 2,878,809 + +0.0 2,878,809 + +0.5 2,878,810 - -0.8 2,878,908 - -0.8 2,878,908 - +0.2 2,878,967 + AO356_12635 0.17 +0.7 2,878,967 + AO356_12635 0.17 +0.6 2,878,968 - AO356_12635 0.17 +0.4 2,878,968 - AO356_12635 0.17 -0.1 2,878,968 - AO356_12635 0.17 -2.5 2,878,968 - AO356_12635 0.17 +0.6 2,878,968 - AO356_12635 0.17 +0.4 2,879,100 + AO356_12635 0.41 +0.1 2,879,100 + AO356_12635 0.41 -2.9 2,879,100 + AO356_12635 0.41 +0.4 2,879,101 - AO356_12635 0.41 -0.3 2,879,202 + AO356_12635 0.60 +1.5 2,879,202 + AO356_12635 0.60 +0.6 2,879,202 + AO356_12635 0.60 +0.0 2,879,202 + AO356_12635 0.60 -0.7 2,879,202 + AO356_12635 0.60 -0.3 2,879,202 + AO356_12635 0.60 -0.9 2,879,202 + AO356_12635 0.60 -0.8 2,879,203 - AO356_12635 0.60 -0.5 2,879,331 + AO356_12635 0.83 -0.1 2,879,331 + AO356_12635 0.83 +1.5 2,879,331 + AO356_12635 0.83 +1.5 2,879,331 + AO356_12635 0.83 -0.5 2,879,331 + AO356_12635 0.83 +0.4 2,879,332 - AO356_12635 0.83 -0.8 2,879,332 - AO356_12635 0.83 +0.5 2,879,332 - AO356_12635 0.83 +0.3 2,879,334 + AO356_12635 0.84 +0.5 2,879,334 + AO356_12635 0.84 +0.3 2,879,335 - AO356_12635 0.84 -0.5 2,879,421 + -0.5 2,879,531 + -0.5 2,879,531 + +0.1 2,879,532 - -1.3 2,879,533 + +0.5 2,879,533 + -1.1 2,879,533 + +0.5 2,879,533 + -0.0 2,879,533 + +1.0 2,879,534 - +0.8 2,879,572 + +0.2 2,879,590 + -0.3 2,879,590 + -0.2 2,879,590 + -0.4 2,879,590 + +0.4 2,879,591 - -0.2 2,879,591 - +0.2 2,879,602 + +0.3 2,879,603 - -2.6 2,879,603 - +1.1 2,879,603 - +0.3 2,879,603 - -0.5 2,879,606 + +1.4 2,879,741 + AO356_12640 0.32 -1.5 2,879,806 + AO356_12640 0.47 -0.8 2,879,807 - AO356_12640 0.47 -0.0 2,879,807 - AO356_12640 0.47 +0.2 2,879,961 - AO356_12640 0.84 -0.3 2,880,027 + -0.0 2,880,028 - +1.0 2,880,031 - -0.5 2,880,031 - -0.1 2,880,031 - +1.4 2,880,227 + -1.3 2,880,227 + -1.3 2,880,227 + -0.5 2,880,227 + +0.5 2,880,228 - -0.1 2,880,228 - +0.2 2,880,228 - -0.6 2,880,228 - -0.3 2,880,228 - +0.5 2,880,228 - +0.1 2,880,327 + -0.3 2,880,327 + -0.3 2,880,327 + -0.7 2,880,327 + -2.9 2,880,327 + +0.7 2,880,327 + -0.4 2,880,327 + +0.6 2,880,327 + +1.3 2,880,328 - -1.0 2,880,328 - -0.0 2,880,328 - +1.2 2,880,328 - +0.1 2,880,328 - +0.4 2,880,328 - -0.8 2,880,328 - -0.5 2,880,417 + AO356_12645 0.13 +0.9 2,880,432 + AO356_12645 0.14 +1.0 2,880,432 + AO356_12645 0.14 -0.3 2,880,432 + AO356_12645 0.14 -0.0 2,880,433 - AO356_12645 0.14 +1.5 2,880,433 - AO356_12645 0.14 +0.2 2,880,537 + AO356_12645 0.19 +0.5 2,880,537 + AO356_12645 0.19 -0.4 2,880,537 + AO356_12645 0.19 +0.0 2,880,537 + AO356_12645 0.19 +1.0 2,880,537 + AO356_12645 0.19 +0.5 2,880,538 - AO356_12645 0.19 +0.3 2,880,538 - AO356_12645 0.19 +0.3 2,880,538 - AO356_12645 0.19 -0.5 2,880,538 - AO356_12645 0.19 +0.1 2,880,538 - AO356_12645 0.19 -0.9 2,880,538 - AO356_12645 0.19 +1.3 2,880,538 - AO356_12645 0.19 -0.4 2,880,538 - AO356_12645 0.19 -0.0 2,880,552 + AO356_12645 0.20 +0.3 2,880,552 + AO356_12645 0.20 +0.3 2,880,552 + AO356_12645 0.20 +1.2 2,880,552 + AO356_12645 0.20 +0.1 2,880,552 + AO356_12645 0.20 -0.6 2,880,552 + AO356_12645 0.20 -0.9 2,880,552 + AO356_12645 0.20 -0.9 2,880,552 + AO356_12645 0.20 -1.0 2,880,552 + AO356_12645 0.20 -0.5 2,880,553 - AO356_12645 0.20 -1.2 2,880,553 - AO356_12645 0.20 -0.8 2,880,553 - AO356_12645 0.20 +1.3 2,880,553 - AO356_12645 0.20 +0.3 2,880,553 - AO356_12645 0.20 +0.5 2,880,553 - AO356_12645 0.20 -0.3 2,880,553 - AO356_12645 0.20 +0.3 2,880,553 - AO356_12645 0.20 -0.6 2,880,553 - AO356_12645 0.20 -0.8 2,880,553 - AO356_12645 0.20 +0.5 2,880,753 + AO356_12645 0.30 -1.3 2,880,753 + AO356_12645 0.30 -0.3 2,880,753 + AO356_12645 0.30 +0.8 2,880,753 + AO356_12645 0.30 +0.2 2,880,753 + AO356_12645 0.30 +1.0 2,880,753 + AO356_12645 0.30 -0.9 2,880,753 + AO356_12645 0.30 -0.4 2,880,753 + AO356_12645 0.30 -0.3 2,880,753 + AO356_12645 0.30 +0.1 2,880,753 + AO356_12645 0.30 +0.5 2,880,754 - AO356_12645 0.30 -0.7 2,880,754 - AO356_12645 0.30 +0.3 2,880,754 - AO356_12645 0.30 +0.4 2,880,754 - AO356_12645 0.30 +0.9 2,880,754 - AO356_12645 0.30 -0.5 2,880,754 - AO356_12645 0.30 +0.3 2,880,754 - AO356_12645 0.30 -1.1 2,880,871 + AO356_12645 0.36 -0.8 2,880,872 - AO356_12645 0.37 +1.1 2,881,017 - AO356_12645 0.44 +0.7
Or see this region's nucleotide sequence