Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_12485 and AO356_12490 are separated by 167 nucleotides AO356_12490 and AO356_12495 are separated by 10 nucleotides AO356_12495 and AO356_12500 are separated by 275 nucleotides
AO356_12485: AO356_12485 - DNA-directed RNA polymerase subunit omega, at 2,851,018 to 2,851,281
_12485
AO356_12490: AO356_12490 - guanylate kinase, at 2,851,449 to 2,852,069
_12490
AO356_12495: AO356_12495 - hypothetical protein, at 2,852,080 to 2,852,943
_12495
AO356_12500: AO356_12500 - ribonuclease PH, at 2,853,219 to 2,853,941
_12500
Position (kb)
2852
2853 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2851.101 kb on - strand, within AO356_12485 at 2851.101 kb on - strand, within AO356_12485 at 2851.101 kb on - strand, within AO356_12485 at 2851.101 kb on - strand, within AO356_12485 at 2851.101 kb on - strand, within AO356_12485 at 2851.101 kb on - strand, within AO356_12485 at 2851.136 kb on - strand, within AO356_12485 at 2851.213 kb on - strand, within AO356_12485 at 2851.253 kb on - strand, within AO356_12485 at 2851.253 kb on - strand, within AO356_12485 at 2851.271 kb on - strand at 2851.285 kb on - strand at 2851.285 kb on - strand at 2851.285 kb on - strand at 2851.285 kb on - strand at 2851.285 kb on - strand at 2851.285 kb on - strand at 2851.285 kb on - strand at 2851.285 kb on - strand at 2851.285 kb on - strand at 2851.306 kb on - strand at 2851.306 kb on - strand at 2851.345 kb on - strand at 2851.416 kb on + strand at 2851.416 kb on + strand at 2851.416 kb on + strand at 2851.416 kb on + strand at 2851.416 kb on + strand at 2851.416 kb on + strand at 2851.416 kb on + strand at 2851.416 kb on + strand at 2851.416 kb on + strand at 2851.416 kb on + strand at 2851.416 kb on + strand at 2851.416 kb on + strand at 2851.416 kb on + strand at 2851.416 kb on + strand at 2851.417 kb on - strand at 2851.417 kb on - strand at 2851.417 kb on - strand at 2851.417 kb on - strand at 2852.082 kb on - strand at 2852.082 kb on - strand at 2852.082 kb on - strand at 2852.082 kb on - strand at 2852.082 kb on - strand at 2852.082 kb on - strand at 2852.082 kb on - strand at 2852.181 kb on + strand, within AO356_12495 at 2852.181 kb on + strand, within AO356_12495 at 2852.181 kb on + strand, within AO356_12495 at 2852.181 kb on + strand, within AO356_12495 at 2852.181 kb on + strand, within AO356_12495 at 2852.182 kb on - strand, within AO356_12495 at 2852.182 kb on - strand, within AO356_12495 at 2852.182 kb on - strand, within AO356_12495 at 2852.371 kb on - strand, within AO356_12495 at 2852.440 kb on - strand, within AO356_12495 at 2852.853 kb on - strand, within AO356_12495 at 2852.999 kb on - strand at 2852.999 kb on - strand at 2852.999 kb on - strand at 2852.999 kb on - strand at 2853.003 kb on - strand at 2853.035 kb on + strand at 2853.035 kb on + strand at 2853.035 kb on + strand at 2853.035 kb on + strand at 2853.036 kb on - strand at 2853.036 kb on - strand at 2853.036 kb on - strand at 2853.036 kb on - strand at 2853.150 kb on - strand at 2853.150 kb on - strand at 2853.176 kb on + strand at 2853.176 kb on + strand at 2853.176 kb on + strand at 2853.176 kb on + strand at 2853.176 kb on + strand at 2853.176 kb on + strand at 2853.177 kb on - strand at 2853.177 kb on - strand at 2853.178 kb on + strand at 2853.179 kb on - strand at 2853.205 kb on + strand at 2853.205 kb on + strand at 2853.205 kb on + strand at 2853.205 kb on + strand at 2853.205 kb on + strand at 2853.205 kb on + strand at 2853.205 kb on + strand at 2853.205 kb on + strand at 2853.205 kb on + strand at 2853.206 kb on - strand at 2853.206 kb on - strand at 2853.206 kb on - strand at 2853.218 kb on + strand at 2853.218 kb on + strand at 2853.219 kb on - strand at 2853.219 kb on - strand at 2853.270 kb on - strand at 2853.279 kb on + strand at 2853.279 kb on + strand at 2853.279 kb on + strand at 2853.279 kb on + strand at 2853.279 kb on + strand at 2853.279 kb on + strand at 2853.280 kb on - strand at 2853.280 kb on - strand at 2853.280 kb on - strand at 2853.280 kb on - strand at 2853.280 kb on - strand at 2853.304 kb on + strand, within AO356_12500 at 2853.305 kb on - strand, within AO356_12500 at 2853.305 kb on - strand, within AO356_12500 at 2853.324 kb on - strand, within AO356_12500 at 2853.324 kb on - strand, within AO356_12500 at 2853.324 kb on - strand, within AO356_12500 at 2853.324 kb on - strand, within AO356_12500 at 2853.324 kb on - strand, within AO356_12500 at 2853.408 kb on + strand, within AO356_12500 at 2853.409 kb on - strand, within AO356_12500 at 2853.479 kb on + strand, within AO356_12500 at 2853.479 kb on + strand, within AO356_12500 at 2853.479 kb on + strand, within AO356_12500 at 2853.558 kb on + strand, within AO356_12500 at 2853.559 kb on - strand, within AO356_12500 at 2853.559 kb on - strand, within AO356_12500 at 2853.559 kb on - strand, within AO356_12500 at 2853.559 kb on - strand, within AO356_12500 at 2853.559 kb on - strand, within AO356_12500 at 2853.559 kb on - strand, within AO356_12500 at 2853.559 kb on - strand, within AO356_12500 at 2853.559 kb on - strand, within AO356_12500 at 2853.723 kb on + strand, within AO356_12500 at 2853.723 kb on + strand, within AO356_12500 at 2853.723 kb on + strand, within AO356_12500 at 2853.723 kb on + strand, within AO356_12500 at 2853.723 kb on + strand, within AO356_12500 at 2853.723 kb on + strand, within AO356_12500 at 2853.723 kb on + strand, within AO356_12500 at 2853.723 kb on + strand, within AO356_12500 at 2853.723 kb on + strand, within AO356_12500 at 2853.723 kb on + strand, within AO356_12500 at 2853.723 kb on + strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.724 kb on - strand, within AO356_12500 at 2853.753 kb on + strand, within AO356_12500 at 2853.753 kb on + strand, within AO356_12500 at 2853.753 kb on + strand, within AO356_12500 at 2853.754 kb on - strand, within AO356_12500 at 2853.754 kb on - strand, within AO356_12500 at 2853.872 kb on + strand at 2853.872 kb on + strand at 2853.872 kb on + strand at 2853.872 kb on + strand at 2853.872 kb on + strand at 2853.873 kb on - strand at 2853.873 kb on - strand at 2853.873 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 2,851,101 - AO356_12485 0.31 +1.3 2,851,101 - AO356_12485 0.31 +1.4 2,851,101 - AO356_12485 0.31 -0.6 2,851,101 - AO356_12485 0.31 +0.9 2,851,101 - AO356_12485 0.31 +0.0 2,851,101 - AO356_12485 0.31 +0.7 2,851,136 - AO356_12485 0.45 +0.2 2,851,213 - AO356_12485 0.74 +0.3 2,851,253 - AO356_12485 0.89 +0.4 2,851,253 - AO356_12485 0.89 -1.6 2,851,271 - -0.7 2,851,285 - -0.3 2,851,285 - -0.5 2,851,285 - -0.3 2,851,285 - -1.0 2,851,285 - -0.9 2,851,285 - -1.3 2,851,285 - -0.2 2,851,285 - +0.1 2,851,285 - -2.0 2,851,306 - -0.4 2,851,306 - -0.7 2,851,345 - -0.6 2,851,416 + +0.7 2,851,416 + -0.1 2,851,416 + -0.3 2,851,416 + -0.8 2,851,416 + -0.0 2,851,416 + -0.5 2,851,416 + -0.5 2,851,416 + +0.2 2,851,416 + -1.1 2,851,416 + +0.1 2,851,416 + +0.0 2,851,416 + -0.1 2,851,416 + -0.8 2,851,416 + -0.2 2,851,417 - -0.3 2,851,417 - -0.8 2,851,417 - +0.3 2,851,417 - +0.5 2,852,082 - +0.5 2,852,082 - +0.0 2,852,082 - +0.0 2,852,082 - -0.5 2,852,082 - +0.7 2,852,082 - +0.1 2,852,082 - +1.1 2,852,181 + AO356_12495 0.12 -1.0 2,852,181 + AO356_12495 0.12 +1.8 2,852,181 + AO356_12495 0.12 +0.4 2,852,181 + AO356_12495 0.12 +1.1 2,852,181 + AO356_12495 0.12 +1.3 2,852,182 - AO356_12495 0.12 +0.5 2,852,182 - AO356_12495 0.12 +0.7 2,852,182 - AO356_12495 0.12 +0.3 2,852,371 - AO356_12495 0.34 +0.3 2,852,440 - AO356_12495 0.42 +0.3 2,852,853 - AO356_12495 0.89 +0.3 2,852,999 - -0.0 2,852,999 - +0.3 2,852,999 - +1.0 2,852,999 - +0.8 2,853,003 - +0.3 2,853,035 + +0.9 2,853,035 + +1.0 2,853,035 + -0.4 2,853,035 + +1.5 2,853,036 - +0.8 2,853,036 - +0.2 2,853,036 - -0.3 2,853,036 - -0.3 2,853,150 - +0.3 2,853,150 - -0.9 2,853,176 + -0.0 2,853,176 + -1.1 2,853,176 + +0.0 2,853,176 + +0.2 2,853,176 + +0.5 2,853,176 + +0.7 2,853,177 - -1.5 2,853,177 - +0.7 2,853,178 + +0.5 2,853,179 - +0.0 2,853,205 + +0.4 2,853,205 + +0.1 2,853,205 + +1.2 2,853,205 + +0.9 2,853,205 + +1.5 2,853,205 + +0.5 2,853,205 + -0.6 2,853,205 + +0.1 2,853,205 + +0.1 2,853,206 - -0.3 2,853,206 - -0.8 2,853,206 - +0.1 2,853,218 + -0.8 2,853,218 + +2.0 2,853,219 - +0.5 2,853,219 - -0.2 2,853,270 - +1.0 2,853,279 + +1.5 2,853,279 + +1.1 2,853,279 + +1.2 2,853,279 + +1.8 2,853,279 + -0.4 2,853,279 + -0.0 2,853,280 - +0.1 2,853,280 - +1.0 2,853,280 - +0.4 2,853,280 - +1.1 2,853,280 - +0.5 2,853,304 + AO356_12500 0.12 +1.5 2,853,305 - AO356_12500 0.12 +0.4 2,853,305 - AO356_12500 0.12 +1.0 2,853,324 - AO356_12500 0.15 -0.5 2,853,324 - AO356_12500 0.15 +0.2 2,853,324 - AO356_12500 0.15 +0.1 2,853,324 - AO356_12500 0.15 +1.1 2,853,324 - AO356_12500 0.15 +1.1 2,853,408 + AO356_12500 0.26 +1.4 2,853,409 - AO356_12500 0.26 -0.0 2,853,479 + AO356_12500 0.36 +0.5 2,853,479 + AO356_12500 0.36 -0.5 2,853,479 + AO356_12500 0.36 -1.2 2,853,558 + AO356_12500 0.47 +0.7 2,853,559 - AO356_12500 0.47 -1.1 2,853,559 - AO356_12500 0.47 +0.5 2,853,559 - AO356_12500 0.47 +1.0 2,853,559 - AO356_12500 0.47 +2.1 2,853,559 - AO356_12500 0.47 +1.0 2,853,559 - AO356_12500 0.47 +1.5 2,853,559 - AO356_12500 0.47 +0.1 2,853,559 - AO356_12500 0.47 +0.2 2,853,723 + AO356_12500 0.70 +0.5 2,853,723 + AO356_12500 0.70 -0.3 2,853,723 + AO356_12500 0.70 +1.0 2,853,723 + AO356_12500 0.70 +0.5 2,853,723 + AO356_12500 0.70 +0.3 2,853,723 + AO356_12500 0.70 -0.7 2,853,723 + AO356_12500 0.70 -1.0 2,853,723 + AO356_12500 0.70 -1.0 2,853,723 + AO356_12500 0.70 +0.2 2,853,723 + AO356_12500 0.70 +0.7 2,853,723 + AO356_12500 0.70 +0.5 2,853,724 - AO356_12500 0.70 +0.3 2,853,724 - AO356_12500 0.70 +1.2 2,853,724 - AO356_12500 0.70 +1.1 2,853,724 - AO356_12500 0.70 +1.8 2,853,724 - AO356_12500 0.70 +2.5 2,853,724 - AO356_12500 0.70 -0.0 2,853,724 - AO356_12500 0.70 +0.7 2,853,724 - AO356_12500 0.70 +0.1 2,853,724 - AO356_12500 0.70 +0.5 2,853,724 - AO356_12500 0.70 +0.7 2,853,724 - AO356_12500 0.70 +0.1 2,853,724 - AO356_12500 0.70 +0.9 2,853,724 - AO356_12500 0.70 +0.4 2,853,724 - AO356_12500 0.70 +2.8 2,853,724 - AO356_12500 0.70 +1.2 2,853,724 - AO356_12500 0.70 +1.1 2,853,753 + AO356_12500 0.74 +0.1 2,853,753 + AO356_12500 0.74 +0.3 2,853,753 + AO356_12500 0.74 +1.1 2,853,754 - AO356_12500 0.74 +0.8 2,853,754 - AO356_12500 0.74 +1.8 2,853,872 + +0.5 2,853,872 + +1.6 2,853,872 + +0.1 2,853,872 + +1.4 2,853,872 + +0.0 2,853,873 - -0.3 2,853,873 - +1.7 2,853,873 - +0.6
Or see this region's nucleotide sequence