Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_12250 and AO356_12255 overlap by 37 nucleotides AO356_12255 and AO356_12260 overlap by 4 nucleotides AO356_12260 and AO356_12265 overlap by 7 nucleotides AO356_12265 and AO356_12270 overlap by 1 nucleotides
AO356_12250: AO356_12250 - type VI secretion protein, at 2,796,494 to 2,797,546
_12250
AO356_12255: AO356_12255 - type VI secretion system protein ImpG, at 2,797,510 to 2,799,369
_12255
AO356_12260: AO356_12260 - type VI secretion system lysozyme, at 2,799,366 to 2,799,878
_12260
AO356_12265: AO356_12265 - hypothetical protein, at 2,799,872 to 2,800,297
_12265
AO356_12270: AO356_12270 - hypothetical protein, at 2,800,297 to 2,800,752
_12270
Position (kb)
2797
2798
2799
2800 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2796.546 kb on + strand at 2796.547 kb on - strand at 2796.547 kb on - strand at 2796.547 kb on - strand at 2796.560 kb on + strand at 2796.560 kb on + strand at 2796.561 kb on - strand at 2796.561 kb on - strand at 2796.563 kb on + strand at 2796.563 kb on + strand at 2796.563 kb on + strand at 2796.563 kb on + strand at 2796.563 kb on + strand at 2796.564 kb on - strand at 2796.564 kb on - strand at 2796.601 kb on + strand, within AO356_12250 at 2796.601 kb on + strand, within AO356_12250 at 2796.601 kb on + strand, within AO356_12250 at 2796.601 kb on + strand, within AO356_12250 at 2796.602 kb on - strand, within AO356_12250 at 2796.602 kb on - strand, within AO356_12250 at 2796.602 kb on - strand, within AO356_12250 at 2796.602 kb on - strand, within AO356_12250 at 2796.602 kb on - strand, within AO356_12250 at 2796.700 kb on - strand, within AO356_12250 at 2796.759 kb on + strand, within AO356_12250 at 2796.759 kb on + strand, within AO356_12250 at 2796.759 kb on + strand, within AO356_12250 at 2796.759 kb on + strand, within AO356_12250 at 2796.906 kb on + strand, within AO356_12250 at 2796.906 kb on + strand, within AO356_12250 at 2796.906 kb on + strand, within AO356_12250 at 2796.907 kb on - strand, within AO356_12250 at 2796.907 kb on - strand, within AO356_12250 at 2796.936 kb on + strand, within AO356_12250 at 2796.937 kb on - strand, within AO356_12250 at 2796.999 kb on + strand, within AO356_12250 at 2796.999 kb on + strand, within AO356_12250 at 2797.000 kb on - strand, within AO356_12250 at 2797.089 kb on + strand, within AO356_12250 at 2797.089 kb on + strand, within AO356_12250 at 2797.090 kb on - strand, within AO356_12250 at 2797.233 kb on + strand, within AO356_12250 at 2797.234 kb on - strand, within AO356_12250 at 2797.234 kb on - strand, within AO356_12250 at 2797.310 kb on - strand, within AO356_12250 at 2797.473 kb on + strand at 2797.473 kb on + strand at 2797.508 kb on - strand at 2797.573 kb on - strand at 2797.610 kb on + strand at 2797.610 kb on + strand at 2797.610 kb on + strand at 2797.610 kb on + strand at 2797.610 kb on + strand at 2797.610 kb on + strand at 2797.610 kb on + strand at 2797.611 kb on - strand at 2797.611 kb on - strand at 2797.611 kb on - strand at 2797.611 kb on - strand at 2797.611 kb on - strand at 2797.611 kb on - strand at 2797.611 kb on - strand at 2797.877 kb on + strand, within AO356_12255 at 2797.877 kb on + strand, within AO356_12255 at 2797.877 kb on + strand, within AO356_12255 at 2797.877 kb on + strand, within AO356_12255 at 2797.877 kb on + strand, within AO356_12255 at 2797.877 kb on + strand, within AO356_12255 at 2797.878 kb on - strand, within AO356_12255 at 2797.878 kb on - strand, within AO356_12255 at 2797.878 kb on - strand, within AO356_12255 at 2798.144 kb on + strand, within AO356_12255 at 2798.145 kb on - strand, within AO356_12255 at 2798.145 kb on - strand, within AO356_12255 at 2798.145 kb on - strand, within AO356_12255 at 2798.145 kb on - strand, within AO356_12255 at 2798.210 kb on + strand, within AO356_12255 at 2798.210 kb on + strand, within AO356_12255 at 2798.210 kb on + strand, within AO356_12255 at 2798.210 kb on + strand, within AO356_12255 at 2798.210 kb on + strand, within AO356_12255 at 2798.211 kb on - strand, within AO356_12255 at 2798.211 kb on - strand, within AO356_12255 at 2798.211 kb on - strand, within AO356_12255 at 2798.211 kb on - strand, within AO356_12255 at 2798.213 kb on + strand, within AO356_12255 at 2798.213 kb on + strand, within AO356_12255 at 2798.213 kb on + strand, within AO356_12255 at 2798.213 kb on + strand, within AO356_12255 at 2798.213 kb on + strand, within AO356_12255 at 2798.213 kb on + strand, within AO356_12255 at 2798.214 kb on - strand, within AO356_12255 at 2798.214 kb on - strand, within AO356_12255 at 2798.214 kb on - strand, within AO356_12255 at 2798.214 kb on - strand, within AO356_12255 at 2798.255 kb on + strand, within AO356_12255 at 2798.588 kb on + strand, within AO356_12255 at 2798.588 kb on + strand, within AO356_12255 at 2798.588 kb on + strand, within AO356_12255 at 2798.588 kb on + strand, within AO356_12255 at 2798.588 kb on + strand, within AO356_12255 at 2798.589 kb on - strand, within AO356_12255 at 2798.589 kb on - strand, within AO356_12255 at 2798.589 kb on - strand, within AO356_12255 at 2798.589 kb on - strand, within AO356_12255 at 2798.756 kb on + strand, within AO356_12255 at 2798.792 kb on + strand, within AO356_12255 at 2798.792 kb on + strand, within AO356_12255 at 2798.793 kb on - strand, within AO356_12255 at 2798.928 kb on - strand, within AO356_12255 at 2798.981 kb on + strand, within AO356_12255 at 2799.122 kb on + strand, within AO356_12255 at 2799.122 kb on + strand, within AO356_12255 at 2799.123 kb on - strand, within AO356_12255 at 2799.123 kb on - strand, within AO356_12255 at 2799.123 kb on - strand, within AO356_12255 at 2799.236 kb on + strand at 2799.236 kb on + strand at 2799.236 kb on + strand at 2799.237 kb on - strand at 2799.290 kb on + strand at 2799.344 kb on + strand at 2799.345 kb on - strand at 2799.345 kb on - strand at 2799.345 kb on - strand at 2799.345 kb on - strand at 2799.834 kb on + strand at 2799.880 kb on + strand at 2799.881 kb on - strand at 2799.894 kb on + strand at 2799.894 kb on + strand at 2799.894 kb on + strand at 2799.930 kb on + strand, within AO356_12265 at 2799.930 kb on + strand, within AO356_12265 at 2799.930 kb on + strand, within AO356_12265 at 2799.930 kb on + strand, within AO356_12265 at 2799.931 kb on - strand, within AO356_12265 at 2799.931 kb on - strand, within AO356_12265 at 2799.931 kb on - strand, within AO356_12265 at 2799.976 kb on + strand, within AO356_12265 at 2799.976 kb on + strand, within AO356_12265 at 2799.977 kb on - strand, within AO356_12265 at 2800.088 kb on - strand, within AO356_12265 at 2800.261 kb on + strand at 2800.274 kb on + strand at 2800.274 kb on + strand at 2800.274 kb on + strand at 2800.275 kb on - strand at 2800.298 kb on + strand at 2800.334 kb on + strand at 2800.334 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 2,796,546 + +0.9 2,796,547 - +0.8 2,796,547 - +0.7 2,796,547 - +0.1 2,796,560 + +0.1 2,796,560 + -0.5 2,796,561 - +0.4 2,796,561 - +0.9 2,796,563 + +0.1 2,796,563 + +0.3 2,796,563 + +0.5 2,796,563 + +0.4 2,796,563 + +0.2 2,796,564 - -0.2 2,796,564 - +0.8 2,796,601 + AO356_12250 0.10 +1.2 2,796,601 + AO356_12250 0.10 -1.2 2,796,601 + AO356_12250 0.10 +0.2 2,796,601 + AO356_12250 0.10 -0.2 2,796,602 - AO356_12250 0.10 +0.2 2,796,602 - AO356_12250 0.10 -0.4 2,796,602 - AO356_12250 0.10 -1.5 2,796,602 - AO356_12250 0.10 +0.5 2,796,602 - AO356_12250 0.10 -0.5 2,796,700 - AO356_12250 0.20 -0.7 2,796,759 + AO356_12250 0.25 +0.1 2,796,759 + AO356_12250 0.25 -0.8 2,796,759 + AO356_12250 0.25 +0.6 2,796,759 + AO356_12250 0.25 +0.5 2,796,906 + AO356_12250 0.39 -0.7 2,796,906 + AO356_12250 0.39 +0.4 2,796,906 + AO356_12250 0.39 +0.0 2,796,907 - AO356_12250 0.39 -0.0 2,796,907 - AO356_12250 0.39 -0.3 2,796,936 + AO356_12250 0.42 -0.3 2,796,937 - AO356_12250 0.42 +0.8 2,796,999 + AO356_12250 0.48 +1.7 2,796,999 + AO356_12250 0.48 -0.8 2,797,000 - AO356_12250 0.48 +0.4 2,797,089 + AO356_12250 0.57 +0.7 2,797,089 + AO356_12250 0.57 +0.7 2,797,090 - AO356_12250 0.57 -0.2 2,797,233 + AO356_12250 0.70 -0.1 2,797,234 - AO356_12250 0.70 -0.7 2,797,234 - AO356_12250 0.70 +0.2 2,797,310 - AO356_12250 0.77 +1.3 2,797,473 + +0.4 2,797,473 + -1.2 2,797,508 - +1.1 2,797,573 - +0.3 2,797,610 + -0.5 2,797,610 + -0.9 2,797,610 + +0.4 2,797,610 + -0.7 2,797,610 + +0.5 2,797,610 + +1.0 2,797,610 + +0.9 2,797,611 - -0.4 2,797,611 - -0.2 2,797,611 - +0.8 2,797,611 - +0.5 2,797,611 - -0.7 2,797,611 - -0.5 2,797,611 - -0.3 2,797,877 + AO356_12255 0.20 -0.6 2,797,877 + AO356_12255 0.20 -0.3 2,797,877 + AO356_12255 0.20 -0.2 2,797,877 + AO356_12255 0.20 -0.5 2,797,877 + AO356_12255 0.20 +1.1 2,797,877 + AO356_12255 0.20 -0.2 2,797,878 - AO356_12255 0.20 -2.9 2,797,878 - AO356_12255 0.20 -0.5 2,797,878 - AO356_12255 0.20 +0.7 2,798,144 + AO356_12255 0.34 -0.0 2,798,145 - AO356_12255 0.34 -0.0 2,798,145 - AO356_12255 0.34 +0.7 2,798,145 - AO356_12255 0.34 +0.4 2,798,145 - AO356_12255 0.34 +1.4 2,798,210 + AO356_12255 0.38 +1.2 2,798,210 + AO356_12255 0.38 +0.2 2,798,210 + AO356_12255 0.38 -0.2 2,798,210 + AO356_12255 0.38 -0.4 2,798,210 + AO356_12255 0.38 +0.4 2,798,211 - AO356_12255 0.38 +0.5 2,798,211 - AO356_12255 0.38 +1.0 2,798,211 - AO356_12255 0.38 -0.2 2,798,211 - AO356_12255 0.38 -0.2 2,798,213 + AO356_12255 0.38 +1.0 2,798,213 + AO356_12255 0.38 +1.2 2,798,213 + AO356_12255 0.38 -0.4 2,798,213 + AO356_12255 0.38 +0.1 2,798,213 + AO356_12255 0.38 -0.5 2,798,213 + AO356_12255 0.38 +0.1 2,798,214 - AO356_12255 0.38 +0.7 2,798,214 - AO356_12255 0.38 -0.3 2,798,214 - AO356_12255 0.38 -0.4 2,798,214 - AO356_12255 0.38 -0.7 2,798,255 + AO356_12255 0.40 -0.8 2,798,588 + AO356_12255 0.58 -1.6 2,798,588 + AO356_12255 0.58 +0.2 2,798,588 + AO356_12255 0.58 -0.6 2,798,588 + AO356_12255 0.58 -1.6 2,798,588 + AO356_12255 0.58 +0.5 2,798,589 - AO356_12255 0.58 +0.8 2,798,589 - AO356_12255 0.58 +0.4 2,798,589 - AO356_12255 0.58 +0.3 2,798,589 - AO356_12255 0.58 -0.2 2,798,756 + AO356_12255 0.67 +0.2 2,798,792 + AO356_12255 0.69 +0.5 2,798,792 + AO356_12255 0.69 -0.3 2,798,793 - AO356_12255 0.69 +0.1 2,798,928 - AO356_12255 0.76 -0.8 2,798,981 + AO356_12255 0.79 -2.0 2,799,122 + AO356_12255 0.87 -0.6 2,799,122 + AO356_12255 0.87 -1.5 2,799,123 - AO356_12255 0.87 +0.1 2,799,123 - AO356_12255 0.87 +0.1 2,799,123 - AO356_12255 0.87 +0.7 2,799,236 + -0.0 2,799,236 + +0.0 2,799,236 + -0.0 2,799,237 - +0.8 2,799,290 + +0.9 2,799,344 + +0.2 2,799,345 - -0.0 2,799,345 - +0.7 2,799,345 - -0.3 2,799,345 - -0.3 2,799,834 + -0.5 2,799,880 + -0.3 2,799,881 - +0.1 2,799,894 + -0.5 2,799,894 + +0.2 2,799,894 + -0.3 2,799,930 + AO356_12265 0.14 -0.1 2,799,930 + AO356_12265 0.14 +0.2 2,799,930 + AO356_12265 0.14 -0.0 2,799,930 + AO356_12265 0.14 -0.5 2,799,931 - AO356_12265 0.14 +1.3 2,799,931 - AO356_12265 0.14 +1.1 2,799,931 - AO356_12265 0.14 +1.5 2,799,976 + AO356_12265 0.24 -0.4 2,799,976 + AO356_12265 0.24 -0.1 2,799,977 - AO356_12265 0.25 +0.7 2,800,088 - AO356_12265 0.51 +1.3 2,800,261 + -0.5 2,800,274 + +0.0 2,800,274 + +0.9 2,800,274 + -0.6 2,800,275 - +0.2 2,800,298 + +0.7 2,800,334 + -0.1 2,800,334 + -0.2
Or see this region's nucleotide sequence