Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_10950 and AO356_10955 are separated by 6 nucleotides AO356_10955 and AO356_10960 are separated by 40 nucleotides AO356_10960 and AO356_10965 are separated by 57 nucleotides AO356_10965 and AO356_10970 are separated by 277 nucleotides AO356_10970 and AO356_10975 are separated by 191 nucleotides
AO356_10950: AO356_10950 - hypothetical protein, at 2,490,987 to 2,491,220
_10950
AO356_10955: AO356_10955 - hypothetical protein, at 2,491,227 to 2,491,652
_10955
AO356_10960: AO356_10960 - hypothetical protein, at 2,491,693 to 2,492,106
_10960
AO356_10965: AO356_10965 - aminopeptidase, at 2,492,164 to 2,493,255
_10965
AO356_10970: AO356_10970 - integration host factor, at 2,493,533 to 2,493,808
_10970
AO356_10975: AO356_10975 - pyridine nucleotide-disulfide oxidoreductase, at 2,494,000 to 2,495,148
_10975
Position (kb)
2492
2493
2494 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2491.200 kb on + strand at 2491.200 kb on + strand at 2491.200 kb on + strand at 2491.201 kb on - strand at 2491.201 kb on - strand at 2491.228 kb on + strand at 2491.229 kb on - strand at 2491.229 kb on - strand at 2491.282 kb on + strand, within AO356_10955 at 2491.282 kb on + strand, within AO356_10955 at 2491.282 kb on + strand, within AO356_10955 at 2491.282 kb on + strand, within AO356_10955 at 2491.282 kb on + strand, within AO356_10955 at 2491.282 kb on + strand, within AO356_10955 at 2491.282 kb on + strand, within AO356_10955 at 2491.282 kb on + strand, within AO356_10955 at 2491.282 kb on + strand, within AO356_10955 at 2491.282 kb on + strand, within AO356_10955 at 2491.283 kb on - strand, within AO356_10955 at 2491.283 kb on - strand, within AO356_10955 at 2491.283 kb on - strand, within AO356_10955 at 2491.283 kb on - strand, within AO356_10955 at 2491.283 kb on - strand, within AO356_10955 at 2491.283 kb on - strand, within AO356_10955 at 2491.283 kb on - strand, within AO356_10955 at 2491.283 kb on - strand, within AO356_10955 at 2491.283 kb on - strand, within AO356_10955 at 2491.283 kb on - strand, within AO356_10955 at 2491.357 kb on + strand, within AO356_10955 at 2491.358 kb on - strand, within AO356_10955 at 2491.372 kb on + strand, within AO356_10955 at 2491.372 kb on + strand, within AO356_10955 at 2491.372 kb on + strand, within AO356_10955 at 2491.372 kb on + strand, within AO356_10955 at 2491.372 kb on + strand, within AO356_10955 at 2491.372 kb on + strand, within AO356_10955 at 2491.372 kb on + strand, within AO356_10955 at 2491.373 kb on - strand, within AO356_10955 at 2491.373 kb on - strand, within AO356_10955 at 2491.373 kb on - strand, within AO356_10955 at 2491.373 kb on - strand, within AO356_10955 at 2491.632 kb on + strand at 2491.644 kb on + strand at 2491.644 kb on + strand at 2491.684 kb on + strand at 2491.685 kb on - strand at 2491.719 kb on + strand at 2491.719 kb on + strand at 2491.719 kb on + strand at 2491.719 kb on + strand at 2491.720 kb on - strand at 2491.720 kb on - strand at 2491.720 kb on - strand at 2491.751 kb on + strand, within AO356_10960 at 2491.751 kb on + strand, within AO356_10960 at 2491.752 kb on - strand, within AO356_10960 at 2491.800 kb on - strand, within AO356_10960 at 2491.800 kb on - strand, within AO356_10960 at 2491.800 kb on - strand, within AO356_10960 at 2491.905 kb on - strand, within AO356_10960 at 2491.946 kb on + strand, within AO356_10960 at 2491.946 kb on + strand, within AO356_10960 at 2491.946 kb on + strand, within AO356_10960 at 2491.947 kb on - strand, within AO356_10960 at 2491.947 kb on - strand, within AO356_10960 at 2491.947 kb on - strand, within AO356_10960 at 2492.130 kb on + strand at 2492.130 kb on + strand at 2492.130 kb on + strand at 2492.130 kb on + strand at 2492.130 kb on + strand at 2492.130 kb on + strand at 2492.130 kb on + strand at 2492.131 kb on - strand at 2492.192 kb on + strand at 2492.192 kb on + strand at 2492.256 kb on + strand at 2492.256 kb on + strand at 2492.256 kb on + strand at 2492.257 kb on - strand at 2492.257 kb on - strand at 2492.267 kb on - strand at 2492.267 kb on - strand at 2492.269 kb on + strand at 2492.269 kb on + strand at 2492.269 kb on + strand at 2492.269 kb on + strand at 2492.269 kb on + strand at 2492.269 kb on + strand at 2492.269 kb on + strand at 2492.269 kb on + strand at 2492.270 kb on - strand at 2492.270 kb on - strand at 2492.270 kb on - strand at 2492.320 kb on - strand, within AO356_10965 at 2492.420 kb on + strand, within AO356_10965 at 2492.421 kb on - strand, within AO356_10965 at 2492.421 kb on - strand, within AO356_10965 at 2492.437 kb on + strand, within AO356_10965 at 2492.438 kb on - strand, within AO356_10965 at 2492.446 kb on + strand, within AO356_10965 at 2492.446 kb on + strand, within AO356_10965 at 2492.447 kb on - strand, within AO356_10965 at 2492.447 kb on - strand, within AO356_10965 at 2492.456 kb on + strand, within AO356_10965 at 2492.456 kb on + strand, within AO356_10965 at 2492.456 kb on + strand, within AO356_10965 at 2492.456 kb on + strand, within AO356_10965 at 2492.456 kb on + strand, within AO356_10965 at 2492.456 kb on + strand, within AO356_10965 at 2492.456 kb on + strand, within AO356_10965 at 2492.456 kb on + strand, within AO356_10965 at 2492.456 kb on + strand, within AO356_10965 at 2492.457 kb on - strand, within AO356_10965 at 2492.552 kb on - strand, within AO356_10965 at 2492.560 kb on + strand, within AO356_10965 at 2492.563 kb on + strand, within AO356_10965 at 2492.563 kb on + strand, within AO356_10965 at 2492.563 kb on + strand, within AO356_10965 at 2492.563 kb on + strand, within AO356_10965 at 2492.564 kb on - strand, within AO356_10965 at 2492.644 kb on + strand, within AO356_10965 at 2492.644 kb on + strand, within AO356_10965 at 2492.645 kb on - strand, within AO356_10965 at 2492.752 kb on + strand, within AO356_10965 at 2492.752 kb on + strand, within AO356_10965 at 2492.752 kb on + strand, within AO356_10965 at 2492.752 kb on + strand, within AO356_10965 at 2492.752 kb on + strand, within AO356_10965 at 2492.752 kb on + strand, within AO356_10965 at 2492.752 kb on + strand, within AO356_10965 at 2492.753 kb on - strand, within AO356_10965 at 2492.753 kb on - strand, within AO356_10965 at 2492.756 kb on + strand, within AO356_10965 at 2492.756 kb on + strand, within AO356_10965 at 2492.757 kb on - strand, within AO356_10965 at 2492.926 kb on + strand, within AO356_10965 at 2492.998 kb on + strand, within AO356_10965 at 2492.998 kb on + strand, within AO356_10965 at 2492.998 kb on + strand, within AO356_10965 at 2492.998 kb on + strand, within AO356_10965 at 2492.998 kb on + strand, within AO356_10965 at 2492.998 kb on + strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2492.999 kb on - strand, within AO356_10965 at 2493.040 kb on + strand, within AO356_10965 at 2493.040 kb on + strand, within AO356_10965 at 2493.040 kb on + strand, within AO356_10965 at 2493.040 kb on + strand, within AO356_10965 at 2493.041 kb on - strand, within AO356_10965 at 2493.041 kb on - strand, within AO356_10965 at 2493.055 kb on + strand, within AO356_10965 at 2493.080 kb on + strand, within AO356_10965 at 2493.081 kb on - strand, within AO356_10965 at 2493.081 kb on - strand, within AO356_10965 at 2493.081 kb on - strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.097 kb on + strand, within AO356_10965 at 2493.098 kb on - strand, within AO356_10965 at 2493.098 kb on - strand, within AO356_10965 at 2493.098 kb on - strand, within AO356_10965 at 2493.098 kb on - strand, within AO356_10965 at 2493.098 kb on - strand, within AO356_10965 at 2493.098 kb on - strand, within AO356_10965 at 2493.098 kb on - strand, within AO356_10965 at 2493.163 kb on + strand at 2493.163 kb on + strand at 2493.163 kb on + strand at 2493.163 kb on + strand at 2493.163 kb on + strand at 2493.163 kb on + strand at 2493.164 kb on - strand at 2493.164 kb on - strand at 2493.164 kb on - strand at 2493.164 kb on - strand at 2493.225 kb on - strand at 2493.225 kb on - strand at 2493.253 kb on + strand at 2493.302 kb on - strand at 2493.302 kb on - strand at 2493.331 kb on + strand at 2493.331 kb on + strand at 2493.332 kb on - strand at 2493.332 kb on - strand at 2493.332 kb on - strand at 2493.365 kb on + strand at 2493.365 kb on + strand at 2493.366 kb on - strand at 2493.482 kb on - strand at 2493.522 kb on - strand at 2493.522 kb on - strand at 2493.522 kb on - strand at 2493.528 kb on - strand at 2493.534 kb on + strand at 2493.534 kb on + strand at 2493.535 kb on - strand at 2493.802 kb on + strand at 2493.802 kb on + strand at 2493.803 kb on - strand at 2493.803 kb on - strand at 2493.803 kb on - strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.841 kb on + strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.842 kb on - strand at 2493.874 kb on - strand at 2493.891 kb on - strand at 2493.891 kb on - strand at 2493.891 kb on - strand at 2493.891 kb on - strand at 2493.891 kb on - strand at 2493.972 kb on - strand at 2493.972 kb on - strand at 2493.997 kb on + strand at 2493.997 kb on + strand at 2493.997 kb on + strand at 2493.998 kb on - strand at 2493.998 kb on - strand at 2493.998 kb on - strand at 2493.998 kb on - strand at 2494.198 kb on + strand, within AO356_10975 at 2494.198 kb on + strand, within AO356_10975 at 2494.204 kb on - strand, within AO356_10975 at 2494.221 kb on - strand, within AO356_10975 at 2494.221 kb on - strand, within AO356_10975
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 2,491,200 + +0.6 2,491,200 + +1.0 2,491,200 + +0.9 2,491,201 - +1.4 2,491,201 - -0.0 2,491,228 + -0.3 2,491,229 - +1.7 2,491,229 - +0.7 2,491,282 + AO356_10955 0.13 +0.5 2,491,282 + AO356_10955 0.13 +0.1 2,491,282 + AO356_10955 0.13 +0.6 2,491,282 + AO356_10955 0.13 -0.8 2,491,282 + AO356_10955 0.13 +0.6 2,491,282 + AO356_10955 0.13 +0.8 2,491,282 + AO356_10955 0.13 +1.1 2,491,282 + AO356_10955 0.13 -0.7 2,491,282 + AO356_10955 0.13 -1.4 2,491,282 + AO356_10955 0.13 -0.7 2,491,283 - AO356_10955 0.13 +0.0 2,491,283 - AO356_10955 0.13 -1.0 2,491,283 - AO356_10955 0.13 -1.4 2,491,283 - AO356_10955 0.13 -0.7 2,491,283 - AO356_10955 0.13 +0.2 2,491,283 - AO356_10955 0.13 -0.6 2,491,283 - AO356_10955 0.13 +0.5 2,491,283 - AO356_10955 0.13 +0.8 2,491,283 - AO356_10955 0.13 +0.1 2,491,283 - AO356_10955 0.13 -1.4 2,491,357 + AO356_10955 0.31 +0.2 2,491,358 - AO356_10955 0.31 -0.1 2,491,372 + AO356_10955 0.34 +0.6 2,491,372 + AO356_10955 0.34 +1.1 2,491,372 + AO356_10955 0.34 -0.3 2,491,372 + AO356_10955 0.34 -0.5 2,491,372 + AO356_10955 0.34 -0.6 2,491,372 + AO356_10955 0.34 +1.0 2,491,372 + AO356_10955 0.34 -0.5 2,491,373 - AO356_10955 0.34 -0.1 2,491,373 - AO356_10955 0.34 -0.8 2,491,373 - AO356_10955 0.34 -0.2 2,491,373 - AO356_10955 0.34 -0.3 2,491,632 + +0.5 2,491,644 + +0.3 2,491,644 + -0.6 2,491,684 + -0.3 2,491,685 - +1.3 2,491,719 + +0.3 2,491,719 + -0.2 2,491,719 + -0.4 2,491,719 + -0.7 2,491,720 - +0.5 2,491,720 - -0.1 2,491,720 - +0.2 2,491,751 + AO356_10960 0.14 -0.3 2,491,751 + AO356_10960 0.14 +1.4 2,491,752 - AO356_10960 0.14 +0.5 2,491,800 - AO356_10960 0.26 +0.3 2,491,800 - AO356_10960 0.26 -0.4 2,491,800 - AO356_10960 0.26 -0.4 2,491,905 - AO356_10960 0.51 +1.2 2,491,946 + AO356_10960 0.61 +0.5 2,491,946 + AO356_10960 0.61 -0.0 2,491,946 + AO356_10960 0.61 +0.2 2,491,947 - AO356_10960 0.61 +0.7 2,491,947 - AO356_10960 0.61 +1.6 2,491,947 - AO356_10960 0.61 -0.2 2,492,130 + +1.3 2,492,130 + +1.0 2,492,130 + +0.5 2,492,130 + -0.8 2,492,130 + -0.2 2,492,130 + +0.2 2,492,130 + +1.2 2,492,131 - +1.1 2,492,192 + -0.7 2,492,192 + -1.6 2,492,256 + -0.9 2,492,256 + -0.3 2,492,256 + +0.1 2,492,257 - +0.0 2,492,257 - -0.5 2,492,267 - -0.3 2,492,267 - +3.2 2,492,269 + -1.1 2,492,269 + +3.6 2,492,269 + -0.0 2,492,269 + +0.2 2,492,269 + +0.3 2,492,269 + -0.1 2,492,269 + +1.9 2,492,269 + +0.5 2,492,270 - -0.1 2,492,270 - +0.6 2,492,270 - +0.7 2,492,320 - AO356_10965 0.14 -0.3 2,492,420 + AO356_10965 0.23 +0.1 2,492,421 - AO356_10965 0.24 -0.3 2,492,421 - AO356_10965 0.24 +1.2 2,492,437 + AO356_10965 0.25 -2.4 2,492,438 - AO356_10965 0.25 +0.3 2,492,446 + AO356_10965 0.26 +0.0 2,492,446 + AO356_10965 0.26 -1.3 2,492,447 - AO356_10965 0.26 -1.1 2,492,447 - AO356_10965 0.26 +0.4 2,492,456 + AO356_10965 0.27 +0.6 2,492,456 + AO356_10965 0.27 +1.2 2,492,456 + AO356_10965 0.27 -0.0 2,492,456 + AO356_10965 0.27 -0.0 2,492,456 + AO356_10965 0.27 +0.8 2,492,456 + AO356_10965 0.27 -0.5 2,492,456 + AO356_10965 0.27 -0.4 2,492,456 + AO356_10965 0.27 -0.0 2,492,456 + AO356_10965 0.27 -0.4 2,492,457 - AO356_10965 0.27 +0.1 2,492,552 - AO356_10965 0.36 +1.2 2,492,560 + AO356_10965 0.36 +1.3 2,492,563 + AO356_10965 0.37 +0.9 2,492,563 + AO356_10965 0.37 -0.1 2,492,563 + AO356_10965 0.37 +0.3 2,492,563 + AO356_10965 0.37 -0.2 2,492,564 - AO356_10965 0.37 +0.3 2,492,644 + AO356_10965 0.44 +0.1 2,492,644 + AO356_10965 0.44 +0.2 2,492,645 - AO356_10965 0.44 -1.2 2,492,752 + AO356_10965 0.54 -0.7 2,492,752 + AO356_10965 0.54 -0.2 2,492,752 + AO356_10965 0.54 -0.4 2,492,752 + AO356_10965 0.54 -0.4 2,492,752 + AO356_10965 0.54 +1.0 2,492,752 + AO356_10965 0.54 +0.4 2,492,752 + AO356_10965 0.54 -1.0 2,492,753 - AO356_10965 0.54 -0.6 2,492,753 - AO356_10965 0.54 +0.0 2,492,756 + AO356_10965 0.54 +0.6 2,492,756 + AO356_10965 0.54 +0.1 2,492,757 - AO356_10965 0.54 -0.4 2,492,926 + AO356_10965 0.70 -1.5 2,492,998 + AO356_10965 0.76 -0.0 2,492,998 + AO356_10965 0.76 -0.7 2,492,998 + AO356_10965 0.76 +0.3 2,492,998 + AO356_10965 0.76 +0.2 2,492,998 + AO356_10965 0.76 -1.6 2,492,998 + AO356_10965 0.76 -0.3 2,492,999 - AO356_10965 0.76 -0.5 2,492,999 - AO356_10965 0.76 +0.2 2,492,999 - AO356_10965 0.76 +0.7 2,492,999 - AO356_10965 0.76 -0.2 2,492,999 - AO356_10965 0.76 -0.1 2,492,999 - AO356_10965 0.76 -0.8 2,492,999 - AO356_10965 0.76 +0.1 2,492,999 - AO356_10965 0.76 -0.3 2,493,040 + AO356_10965 0.80 +1.0 2,493,040 + AO356_10965 0.80 +0.9 2,493,040 + AO356_10965 0.80 -0.3 2,493,040 + AO356_10965 0.80 +0.1 2,493,041 - AO356_10965 0.80 +0.2 2,493,041 - AO356_10965 0.80 -0.6 2,493,055 + AO356_10965 0.82 -1.4 2,493,080 + AO356_10965 0.84 +0.2 2,493,081 - AO356_10965 0.84 -0.9 2,493,081 - AO356_10965 0.84 -0.7 2,493,081 - AO356_10965 0.84 -0.0 2,493,097 + AO356_10965 0.85 +0.2 2,493,097 + AO356_10965 0.85 +0.3 2,493,097 + AO356_10965 0.85 +0.5 2,493,097 + AO356_10965 0.85 +0.8 2,493,097 + AO356_10965 0.85 +0.3 2,493,097 + AO356_10965 0.85 +1.1 2,493,097 + AO356_10965 0.85 -1.2 2,493,097 + AO356_10965 0.85 +0.5 2,493,098 - AO356_10965 0.86 -0.1 2,493,098 - AO356_10965 0.86 +0.3 2,493,098 - AO356_10965 0.86 +2.2 2,493,098 - AO356_10965 0.86 -0.9 2,493,098 - AO356_10965 0.86 -0.5 2,493,098 - AO356_10965 0.86 +0.1 2,493,098 - AO356_10965 0.86 -0.5 2,493,163 + +0.5 2,493,163 + +0.9 2,493,163 + +0.6 2,493,163 + -0.2 2,493,163 + -0.3 2,493,163 + -0.0 2,493,164 - -0.3 2,493,164 - +0.2 2,493,164 - -1.6 2,493,164 - +0.1 2,493,225 - +0.1 2,493,225 - -1.8 2,493,253 + -0.0 2,493,302 - +0.2 2,493,302 - -0.5 2,493,331 + -0.5 2,493,331 + +1.6 2,493,332 - +0.8 2,493,332 - -0.3 2,493,332 - +0.1 2,493,365 + -1.3 2,493,365 + -1.9 2,493,366 - +0.0 2,493,482 - +0.1 2,493,522 - +0.6 2,493,522 - +0.1 2,493,522 - +0.5 2,493,528 - -0.4 2,493,534 + +1.1 2,493,534 + +0.6 2,493,535 - +0.7 2,493,802 + -0.4 2,493,802 + +0.4 2,493,803 - -1.0 2,493,803 - +1.6 2,493,803 - +0.2 2,493,841 + +0.2 2,493,841 + +0.3 2,493,841 + -0.5 2,493,841 + -0.1 2,493,841 + -0.7 2,493,841 + -1.6 2,493,841 + -0.5 2,493,841 + +0.4 2,493,841 + +0.9 2,493,841 + -0.3 2,493,841 + +0.9 2,493,841 + +0.9 2,493,841 + -1.0 2,493,841 + -0.0 2,493,841 + +0.1 2,493,841 + -1.9 2,493,842 - -0.9 2,493,842 - +0.3 2,493,842 - -0.4 2,493,842 - +0.5 2,493,842 - +0.8 2,493,842 - -0.5 2,493,842 - -0.5 2,493,842 - -0.5 2,493,842 - +0.4 2,493,842 - -0.1 2,493,842 - -0.2 2,493,842 - +0.0 2,493,874 - +0.5 2,493,891 - +0.8 2,493,891 - -0.4 2,493,891 - -0.4 2,493,891 - -0.8 2,493,891 - +0.6 2,493,972 - -0.5 2,493,972 - -1.3 2,493,997 + -0.0 2,493,997 + +0.3 2,493,997 + -0.3 2,493,998 - +0.6 2,493,998 - +0.2 2,493,998 - -0.1 2,493,998 - +0.3 2,494,198 + AO356_10975 0.17 -1.0 2,494,198 + AO356_10975 0.17 -0.2 2,494,204 - AO356_10975 0.18 -0.5 2,494,221 - AO356_10975 0.19 +0.2 2,494,221 - AO356_10975 0.19 -0.4
Or see this region's nucleotide sequence