Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09790 and AO356_09795 are separated by 63 nucleotides AO356_09795 and AO356_09800 are separated by 9 nucleotides AO356_09800 and AO356_09805 are separated by 42 nucleotides
AO356_09790: AO356_09790 - amino acid ABC transporter substrate-binding protein, at 2,220,001 to 2,220,747
_09790
AO356_09795: AO356_09795 - imidazole glycerol phosphate synthase subunit HisF, at 2,220,811 to 2,221,581
_09795
AO356_09800: AO356_09800 - 1-(5-phosphoribosyl)-5-((5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase (EC 5.3.1.16) (from data) , at 2,221,591 to 2,222,328
_09800
AO356_09805: AO356_09805 - 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase, at 2,222,371 to 2,222,625
_09805
Position (kb)
2220
2221
2222 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2219.999 kb on + strand at 2220.008 kb on + strand at 2220.009 kb on - strand at 2220.091 kb on + strand, within AO356_09790 at 2220.091 kb on + strand, within AO356_09790 at 2220.113 kb on + strand, within AO356_09790 at 2220.113 kb on + strand, within AO356_09790 at 2220.114 kb on - strand, within AO356_09790 at 2220.114 kb on - strand, within AO356_09790 at 2220.114 kb on - strand, within AO356_09790 at 2220.317 kb on + strand, within AO356_09790 at 2220.317 kb on + strand, within AO356_09790 at 2220.317 kb on + strand, within AO356_09790 at 2220.318 kb on - strand, within AO356_09790 at 2220.332 kb on + strand, within AO356_09790 at 2220.333 kb on - strand, within AO356_09790 at 2220.473 kb on + strand, within AO356_09790 at 2220.473 kb on + strand, within AO356_09790 at 2220.500 kb on + strand, within AO356_09790 at 2220.500 kb on + strand, within AO356_09790 at 2220.500 kb on + strand, within AO356_09790 at 2220.500 kb on + strand, within AO356_09790 at 2220.500 kb on + strand, within AO356_09790 at 2220.501 kb on - strand, within AO356_09790 at 2220.501 kb on - strand, within AO356_09790 at 2220.523 kb on + strand, within AO356_09790 at 2220.536 kb on + strand, within AO356_09790 at 2220.536 kb on + strand, within AO356_09790 at 2220.537 kb on - strand, within AO356_09790 at 2220.537 kb on - strand, within AO356_09790 at 2220.544 kb on - strand, within AO356_09790 at 2220.559 kb on + strand, within AO356_09790 at 2220.559 kb on + strand, within AO356_09790 at 2220.559 kb on + strand, within AO356_09790 at 2220.560 kb on - strand, within AO356_09790 at 2220.638 kb on + strand, within AO356_09790 at 2220.639 kb on - strand, within AO356_09790 at 2220.675 kb on + strand at 2220.675 kb on + strand at 2220.675 kb on + strand at 2220.676 kb on - strand at 2220.676 kb on - strand at 2220.842 kb on + strand at 2220.842 kb on + strand at 2220.842 kb on + strand at 2220.842 kb on + strand at 2220.842 kb on + strand at 2220.867 kb on - strand at 2221.386 kb on + strand, within AO356_09795 at 2221.387 kb on - strand, within AO356_09795 at 2221.602 kb on - strand at 2221.649 kb on + strand at 2221.649 kb on + strand at 2221.833 kb on - strand, within AO356_09800 at 2221.888 kb on + strand, within AO356_09800 at 2222.030 kb on + strand, within AO356_09800 at 2222.030 kb on + strand, within AO356_09800 at 2222.030 kb on + strand, within AO356_09800 at 2222.030 kb on + strand, within AO356_09800 at 2222.030 kb on + strand, within AO356_09800 at 2222.051 kb on + strand, within AO356_09800 at 2222.051 kb on + strand, within AO356_09800 at 2222.051 kb on + strand, within AO356_09800 at 2222.051 kb on + strand, within AO356_09800 at 2222.051 kb on + strand, within AO356_09800 at 2222.052 kb on - strand, within AO356_09800 at 2222.052 kb on - strand, within AO356_09800 at 2222.052 kb on - strand, within AO356_09800 at 2222.052 kb on - strand, within AO356_09800 at 2222.284 kb on + strand at 2222.284 kb on + strand at 2222.284 kb on + strand at 2222.284 kb on + strand at 2222.285 kb on - strand at 2222.345 kb on + strand at 2222.345 kb on + strand at 2222.346 kb on - strand at 2222.346 kb on - strand at 2222.346 kb on - strand at 2222.351 kb on + strand at 2222.460 kb on - strand, within AO356_09805 at 2222.460 kb on - strand, within AO356_09805 at 2222.460 kb on - strand, within AO356_09805 at 2222.460 kb on - strand, within AO356_09805 at 2222.460 kb on - strand, within AO356_09805
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 2,219,999 + -0.5 2,220,008 + +0.3 2,220,009 - -0.3 2,220,091 + AO356_09790 0.12 +0.2 2,220,091 + AO356_09790 0.12 +0.1 2,220,113 + AO356_09790 0.15 +1.1 2,220,113 + AO356_09790 0.15 -0.8 2,220,114 - AO356_09790 0.15 +0.8 2,220,114 - AO356_09790 0.15 +0.5 2,220,114 - AO356_09790 0.15 +0.7 2,220,317 + AO356_09790 0.42 +1.0 2,220,317 + AO356_09790 0.42 +0.6 2,220,317 + AO356_09790 0.42 +0.6 2,220,318 - AO356_09790 0.42 -0.1 2,220,332 + AO356_09790 0.44 -0.7 2,220,333 - AO356_09790 0.44 +0.8 2,220,473 + AO356_09790 0.63 -1.1 2,220,473 + AO356_09790 0.63 -0.7 2,220,500 + AO356_09790 0.67 +0.5 2,220,500 + AO356_09790 0.67 +0.0 2,220,500 + AO356_09790 0.67 +0.2 2,220,500 + AO356_09790 0.67 +0.0 2,220,500 + AO356_09790 0.67 -0.3 2,220,501 - AO356_09790 0.67 +0.2 2,220,501 - AO356_09790 0.67 +1.2 2,220,523 + AO356_09790 0.70 +0.9 2,220,536 + AO356_09790 0.72 +0.1 2,220,536 + AO356_09790 0.72 +0.1 2,220,537 - AO356_09790 0.72 -0.1 2,220,537 - AO356_09790 0.72 -0.7 2,220,544 - AO356_09790 0.73 +0.1 2,220,559 + AO356_09790 0.75 -0.2 2,220,559 + AO356_09790 0.75 -0.3 2,220,559 + AO356_09790 0.75 +1.5 2,220,560 - AO356_09790 0.75 +1.3 2,220,638 + AO356_09790 0.85 -0.4 2,220,639 - AO356_09790 0.85 +0.8 2,220,675 + +0.3 2,220,675 + +0.3 2,220,675 + +0.6 2,220,676 - -0.0 2,220,676 - +0.2 2,220,842 + -1.5 2,220,842 + +1.5 2,220,842 + -0.8 2,220,842 + +0.8 2,220,842 + -0.8 2,220,867 - +0.5 2,221,386 + AO356_09795 0.75 +1.8 2,221,387 - AO356_09795 0.75 +0.4 2,221,602 - +0.2 2,221,649 + +0.1 2,221,649 + +0.5 2,221,833 - AO356_09800 0.33 +1.8 2,221,888 + AO356_09800 0.40 +0.5 2,222,030 + AO356_09800 0.59 -0.3 2,222,030 + AO356_09800 0.59 -1.8 2,222,030 + AO356_09800 0.59 +0.9 2,222,030 + AO356_09800 0.59 -1.8 2,222,030 + AO356_09800 0.59 -1.0 2,222,051 + AO356_09800 0.62 -0.8 2,222,051 + AO356_09800 0.62 +0.6 2,222,051 + AO356_09800 0.62 -2.0 2,222,051 + AO356_09800 0.62 -1.1 2,222,051 + AO356_09800 0.62 +0.5 2,222,052 - AO356_09800 0.62 +0.9 2,222,052 - AO356_09800 0.62 -0.3 2,222,052 - AO356_09800 0.62 +0.2 2,222,052 - AO356_09800 0.62 +0.5 2,222,284 + -1.5 2,222,284 + -0.2 2,222,284 + -0.3 2,222,284 + +0.1 2,222,285 - +0.9 2,222,345 + -1.8 2,222,345 + +0.2 2,222,346 - -0.4 2,222,346 - +1.2 2,222,346 - +0.3 2,222,351 + +1.3 2,222,460 - AO356_09805 0.35 -1.5 2,222,460 - AO356_09805 0.35 +0.7 2,222,460 - AO356_09805 0.35 -0.3 2,222,460 - AO356_09805 0.35 -1.3 2,222,460 - AO356_09805 0.35 +0.5
Or see this region's nucleotide sequence