Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_09555

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_09555 and AO356_09560 are separated by 83 nucleotides AO356_09555: AO356_09555 - hypothetical protein, at 2,162,495 to 2,162,803 _09555 AO356_09560: AO356_09560 - glucosyltransferase MdoH, at 2,162,887 to 2,165,457 _09560 Position (kb) 2162 2163Strain fitness (log2 ratio) -2 -1 0 1at 2161.577 kb on + strandat 2161.586 kb on - strandat 2161.586 kb on - strandat 2161.586 kb on - strandat 2161.652 kb on + strandat 2161.738 kb on - strandat 2161.738 kb on - strandat 2161.987 kb on + strandat 2161.987 kb on + strandat 2161.987 kb on + strandat 2161.987 kb on + strandat 2161.988 kb on - strandat 2162.063 kb on + strandat 2162.063 kb on + strandat 2162.065 kb on + strandat 2162.065 kb on + strandat 2162.065 kb on + strandat 2162.066 kb on - strandat 2162.066 kb on - strandat 2162.066 kb on - strandat 2162.066 kb on - strandat 2162.219 kb on + strandat 2162.219 kb on + strandat 2162.219 kb on + strandat 2162.477 kb on + strandat 2162.496 kb on + strandat 2162.503 kb on + strandat 2162.504 kb on - strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.505 kb on + strandat 2162.506 kb on - strandat 2162.506 kb on - strandat 2162.506 kb on - strandat 2162.506 kb on - strandat 2162.506 kb on - strandat 2162.506 kb on - strandat 2162.506 kb on - strandat 2162.506 kb on - strandat 2162.506 kb on - strandat 2162.506 kb on - strandat 2162.547 kb on + strand, within AO356_09555at 2162.578 kb on + strand, within AO356_09555at 2162.578 kb on + strand, within AO356_09555at 2162.578 kb on + strand, within AO356_09555at 2162.579 kb on - strand, within AO356_09555at 2162.828 kb on - strandat 2162.885 kb on + strandat 2162.886 kb on - strandat 2162.921 kb on - strandat 2162.927 kb on - strandat 2163.245 kb on + strand, within AO356_09560at 2163.246 kb on - strand, within AO356_09560at 2163.246 kb on - strand, within AO356_09560at 2163.281 kb on + strand, within AO356_09560at 2163.281 kb on + strand, within AO356_09560at 2163.281 kb on + strand, within AO356_09560at 2163.281 kb on + strand, within AO356_09560at 2163.691 kb on - strand, within AO356_09560at 2163.745 kb on - strand, within AO356_09560at 2163.803 kb on + strand, within AO356_09560at 2163.803 kb on + strand, within AO356_09560

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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2,161,577 + -0.8
2,161,586 - -0.7
2,161,586 - -0.1
2,161,586 - -0.2
2,161,652 + -0.2
2,161,738 - +0.8
2,161,738 - +0.6
2,161,987 + -0.6
2,161,987 + -0.6
2,161,987 + +0.5
2,161,987 + -2.6
2,161,988 - -1.0
2,162,063 + -0.4
2,162,063 + -0.7
2,162,065 + +0.7
2,162,065 + -0.7
2,162,065 + +0.2
2,162,066 - +0.5
2,162,066 - -2.1
2,162,066 - +0.7
2,162,066 - -0.0
2,162,219 + +0.0
2,162,219 + -0.1
2,162,219 + -0.2
2,162,477 + -0.2
2,162,496 + +0.2
2,162,503 + +0.3
2,162,504 - +0.4
2,162,505 + +0.2
2,162,505 + +0.5
2,162,505 + +1.0
2,162,505 + -0.2
2,162,505 + -0.3
2,162,505 + -0.5
2,162,505 + +0.8
2,162,505 + +0.5
2,162,505 + -0.5
2,162,505 + -1.1
2,162,505 + -0.5
2,162,505 + +0.5
2,162,505 + +0.3
2,162,505 + -0.1
2,162,505 + +0.8
2,162,505 + +0.2
2,162,505 + -1.3
2,162,506 - +0.0
2,162,506 - -0.4
2,162,506 - +0.0
2,162,506 - -0.3
2,162,506 - -0.4
2,162,506 - +0.1
2,162,506 - +0.5
2,162,506 - -0.8
2,162,506 - -0.2
2,162,506 - -1.3
2,162,547 + AO356_09555 0.17 -0.2
2,162,578 + AO356_09555 0.27 -0.6
2,162,578 + AO356_09555 0.27 -0.8
2,162,578 + AO356_09555 0.27 -0.5
2,162,579 - AO356_09555 0.27 -0.9
2,162,828 - -0.4
2,162,885 + -0.0
2,162,886 - -1.1
2,162,921 - -0.7
2,162,927 - +0.3
2,163,245 + AO356_09560 0.14 -0.4
2,163,246 - AO356_09560 0.14 +0.5
2,163,246 - AO356_09560 0.14 +0.7
2,163,281 + AO356_09560 0.15 +0.3
2,163,281 + AO356_09560 0.15 +0.1
2,163,281 + AO356_09560 0.15 +0.7
2,163,281 + AO356_09560 0.15 +1.0
2,163,691 - AO356_09560 0.31 -0.4
2,163,745 - AO356_09560 0.33 +0.3
2,163,803 + AO356_09560 0.36 +0.7
2,163,803 + AO356_09560 0.36 +0.1

Or see this region's nucleotide sequence