Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09525 and AO356_09530 are separated by 24 nucleotides AO356_09530 and AO356_09535 are separated by 10 nucleotides AO356_09535 and AO356_09540 overlap by 4 nucleotides AO356_09540 and AO356_09545 overlap by 4 nucleotides AO356_09545 and AO356_09550 are separated by 130 nucleotides
AO356_09525: AO356_09525 - phosphoribosyl-ATP pyrophosphatase (EC 3.6.1.31) (from data) , at 2,156,793 to 2,157,125
_09525
AO356_09530: AO356_09530 - preprotein translocase subunit SecA, at 2,157,150 to 2,157,437
_09530
AO356_09535: AO356_09535 - preprotein translocase, at 2,157,448 to 2,157,867
_09535
AO356_09540: AO356_09540 - twin-arginine protein translocation system subunit TatC, at 2,157,864 to 2,158,661
_09540
AO356_09545: AO356_09545 - 16S rRNA methyltransferase, at 2,158,658 to 2,159,365
_09545
AO356_09550: AO356_09550 - chemotaxis protein, at 2,159,496 to 2,161,412
_09550
Position (kb)
2157
2158
2159 Strain fitness (log2 ratio)
-1
0
1
2 at 2156.877 kb on + strand, within AO356_09525 at 2156.877 kb on + strand, within AO356_09525 at 2156.878 kb on - strand, within AO356_09525 at 2157.055 kb on + strand, within AO356_09525 at 2157.383 kb on + strand, within AO356_09530 at 2157.446 kb on + strand at 2157.446 kb on + strand at 2157.447 kb on - strand at 2157.807 kb on + strand, within AO356_09535 at 2157.843 kb on + strand at 2157.999 kb on + strand, within AO356_09540 at 2158.029 kb on + strand, within AO356_09540 at 2158.335 kb on + strand, within AO356_09540 at 2159.421 kb on + strand at 2159.428 kb on + strand at 2159.463 kb on + strand at 2159.464 kb on - strand at 2159.464 kb on - strand at 2159.464 kb on - strand at 2159.489 kb on + strand at 2159.490 kb on - strand at 2159.530 kb on + strand at 2159.530 kb on + strand at 2159.530 kb on + strand at 2159.530 kb on + strand at 2159.531 kb on - strand at 2159.531 kb on - strand at 2159.640 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 2,156,877 + AO356_09525 0.25 +0.2 2,156,877 + AO356_09525 0.25 +1.0 2,156,878 - AO356_09525 0.26 +0.5 2,157,055 + AO356_09525 0.79 -0.1 2,157,383 + AO356_09530 0.81 +0.1 2,157,446 + +0.5 2,157,446 + +0.9 2,157,447 - +0.5 2,157,807 + AO356_09535 0.85 -0.1 2,157,843 + +1.8 2,157,999 + AO356_09540 0.17 +2.5 2,158,029 + AO356_09540 0.21 +2.7 2,158,335 + AO356_09540 0.59 +1.2 2,159,421 + +0.3 2,159,428 + +0.8 2,159,463 + -0.5 2,159,464 - -1.2 2,159,464 - -0.4 2,159,464 - -0.0 2,159,489 + +1.5 2,159,490 - +0.2 2,159,530 + +1.4 2,159,530 + +0.6 2,159,530 + +0.7 2,159,530 + +1.4 2,159,531 - -0.4 2,159,531 - -0.1 2,159,640 - -0.7
Or see this region's nucleotide sequence