Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_09455

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_09445 and AO356_09450 are separated by 1 nucleotidesAO356_09450 and AO356_09455 are separated by 256 nucleotidesAO356_09455 and AO356_09460 are separated by 50 nucleotides AO356_09445: AO356_09445 - arginine--tRNA ligase, at 2,140,371 to 2,142,107 _09445 AO356_09450: AO356_09450 - cell division protein, at 2,142,109 to 2,142,804 _09450 AO356_09455: AO356_09455 - ATP-dependent protease subunit HslV, at 2,143,061 to 2,143,591 _09455 AO356_09460: AO356_09460 - ATP-dependent protease ATP-binding subunit HslU, at 2,143,642 to 2,144,979 _09460 Position (kb) 2143 2144Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2142.782 kb on + strandat 2142.807 kb on - strandat 2143.013 kb on + strandat 2143.013 kb on + strandat 2143.013 kb on + strandat 2143.013 kb on + strandat 2143.014 kb on - strandat 2143.014 kb on - strandat 2143.014 kb on - strandat 2143.014 kb on - strandat 2143.175 kb on + strand, within AO356_09455at 2143.445 kb on + strand, within AO356_09455at 2143.589 kb on + strandat 2143.589 kb on + strandat 2143.590 kb on - strandat 2143.638 kb on + strandat 2143.638 kb on + strandat 2143.638 kb on + strandat 2143.638 kb on + strandat 2143.638 kb on + strandat 2143.639 kb on - strandat 2143.639 kb on - strandat 2143.639 kb on - strandat 2143.639 kb on - strandat 2143.639 kb on - strandat 2143.639 kb on - strandat 2143.639 kb on - strandat 2143.641 kb on + strandat 2143.641 kb on + strandat 2143.641 kb on + strandat 2143.642 kb on - strandat 2143.642 kb on - strandat 2143.642 kb on - strandat 2143.687 kb on - strandat 2143.909 kb on + strand, within AO356_09460at 2143.909 kb on + strand, within AO356_09460at 2143.910 kb on - strand, within AO356_09460at 2144.465 kb on + strand, within AO356_09460at 2144.465 kb on + strand, within AO356_09460at 2144.465 kb on + strand, within AO356_09460at 2144.465 kb on + strand, within AO356_09460at 2144.465 kb on + strand, within AO356_09460at 2144.465 kb on + strand, within AO356_09460at 2144.466 kb on - strand, within AO356_09460at 2144.466 kb on - strand, within AO356_09460at 2144.466 kb on - strand, within AO356_09460

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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2,142,782 + -0.2
2,142,807 - -0.3
2,143,013 + -0.5
2,143,013 + +0.8
2,143,013 + +0.5
2,143,013 + -0.5
2,143,014 - +0.2
2,143,014 - -0.1
2,143,014 - -0.2
2,143,014 - -1.8
2,143,175 + AO356_09455 0.21 +0.9
2,143,445 + AO356_09455 0.72 +1.1
2,143,589 + -0.4
2,143,589 + +0.1
2,143,590 - -0.7
2,143,638 + -0.8
2,143,638 + +0.4
2,143,638 + -1.6
2,143,638 + +0.2
2,143,638 + +1.6
2,143,639 - -2.3
2,143,639 - -0.5
2,143,639 - -0.2
2,143,639 - -0.5
2,143,639 - -0.8
2,143,639 - +0.4
2,143,639 - -3.1
2,143,641 + -0.5
2,143,641 + +0.5
2,143,641 + -0.2
2,143,642 - -2.5
2,143,642 - -2.3
2,143,642 - -1.8
2,143,687 - +2.5
2,143,909 + AO356_09460 0.20 +0.5
2,143,909 + AO356_09460 0.20 -0.4
2,143,910 - AO356_09460 0.20 -2.0
2,144,465 + AO356_09460 0.62 -0.3
2,144,465 + AO356_09460 0.62 +1.3
2,144,465 + AO356_09460 0.62 -1.7
2,144,465 + AO356_09460 0.62 -1.8
2,144,465 + AO356_09460 0.62 -1.6
2,144,465 + AO356_09460 0.62 +0.1
2,144,466 - AO356_09460 0.62 -0.8
2,144,466 - AO356_09460 0.62 -1.0
2,144,466 - AO356_09460 0.62 +1.5

Or see this region's nucleotide sequence