Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_09110 and AO356_09115 are separated by 27 nucleotides AO356_09115 and AO356_09120 are separated by 37 nucleotides AO356_09120 and AO356_09125 are separated by 345 nucleotides
AO356_09110: AO356_09110 - MFS transporter, at 2,062,371 to 2,063,711
_09110
AO356_09115: AO356_09115 - polysaccharide deacetylase, at 2,063,739 to 2,064,620
_09115
AO356_09120: AO356_09120 - amidase, at 2,064,658 to 2,066,019
_09120
AO356_09125: AO356_09125 - GntR family transcriptional regulator, at 2,066,365 to 2,067,366
_09125
Position (kb)
2064
2065
2066
2067 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2063.701 kb on + strand at 2063.701 kb on + strand at 2063.702 kb on - strand at 2063.702 kb on - strand at 2063.728 kb on + strand at 2063.729 kb on - strand at 2063.920 kb on + strand, within AO356_09115 at 2063.921 kb on - strand, within AO356_09115 at 2064.031 kb on + strand, within AO356_09115 at 2064.032 kb on - strand, within AO356_09115 at 2064.112 kb on + strand, within AO356_09115 at 2064.112 kb on + strand, within AO356_09115 at 2064.112 kb on + strand, within AO356_09115 at 2064.148 kb on + strand, within AO356_09115 at 2064.148 kb on + strand, within AO356_09115 at 2064.148 kb on + strand, within AO356_09115 at 2064.148 kb on + strand, within AO356_09115 at 2064.148 kb on + strand, within AO356_09115 at 2064.148 kb on + strand, within AO356_09115 at 2064.148 kb on + strand, within AO356_09115 at 2064.149 kb on - strand, within AO356_09115 at 2064.149 kb on - strand, within AO356_09115 at 2064.151 kb on + strand, within AO356_09115 at 2064.152 kb on - strand, within AO356_09115 at 2064.152 kb on - strand, within AO356_09115 at 2064.152 kb on - strand, within AO356_09115 at 2064.187 kb on + strand, within AO356_09115 at 2064.187 kb on + strand, within AO356_09115 at 2064.187 kb on + strand, within AO356_09115 at 2064.187 kb on + strand, within AO356_09115 at 2064.188 kb on - strand, within AO356_09115 at 2064.253 kb on + strand, within AO356_09115 at 2064.254 kb on - strand, within AO356_09115 at 2064.254 kb on - strand, within AO356_09115 at 2064.302 kb on + strand, within AO356_09115 at 2064.357 kb on - strand, within AO356_09115 at 2064.359 kb on - strand, within AO356_09115 at 2064.440 kb on + strand, within AO356_09115 at 2064.440 kb on + strand, within AO356_09115 at 2064.441 kb on - strand, within AO356_09115 at 2064.528 kb on - strand, within AO356_09115 at 2064.528 kb on - strand, within AO356_09115 at 2064.608 kb on + strand at 2064.608 kb on + strand at 2064.608 kb on + strand at 2064.614 kb on + strand at 2064.974 kb on + strand, within AO356_09120 at 2064.975 kb on - strand, within AO356_09120 at 2064.975 kb on - strand, within AO356_09120 at 2064.975 kb on - strand, within AO356_09120 at 2065.408 kb on + strand, within AO356_09120 at 2065.408 kb on + strand, within AO356_09120 at 2065.409 kb on - strand, within AO356_09120 at 2066.044 kb on + strand at 2066.089 kb on + strand at 2066.089 kb on + strand at 2066.089 kb on + strand at 2066.141 kb on - strand at 2066.152 kb on + strand at 2066.152 kb on + strand at 2066.152 kb on + strand at 2066.153 kb on - strand at 2066.153 kb on - strand at 2066.153 kb on - strand at 2066.153 kb on - strand at 2066.205 kb on + strand at 2066.212 kb on - strand at 2066.212 kb on - strand at 2066.216 kb on - strand at 2066.216 kb on - strand at 2066.216 kb on - strand at 2066.216 kb on - strand at 2066.216 kb on - strand at 2066.216 kb on - strand at 2066.216 kb on - strand at 2066.220 kb on + strand at 2066.221 kb on - strand at 2066.221 kb on - strand at 2066.243 kb on + strand at 2066.243 kb on + strand at 2066.243 kb on + strand at 2066.243 kb on + strand at 2066.243 kb on + strand at 2066.243 kb on + strand at 2066.243 kb on + strand at 2066.244 kb on - strand at 2066.244 kb on - strand at 2066.251 kb on + strand at 2066.251 kb on + strand at 2066.251 kb on + strand at 2066.251 kb on + strand at 2066.251 kb on + strand at 2066.252 kb on - strand at 2066.252 kb on - strand at 2066.257 kb on + strand at 2066.426 kb on + strand at 2066.426 kb on + strand at 2066.426 kb on + strand at 2066.427 kb on - strand at 2066.427 kb on - strand at 2066.474 kb on + strand, within AO356_09125 at 2066.584 kb on + strand, within AO356_09125 at 2066.739 kb on + strand, within AO356_09125 at 2066.739 kb on + strand, within AO356_09125 at 2066.739 kb on + strand, within AO356_09125 at 2066.739 kb on + strand, within AO356_09125 at 2066.739 kb on + strand, within AO356_09125 at 2066.740 kb on - strand, within AO356_09125 at 2066.860 kb on + strand, within AO356_09125 at 2066.861 kb on - strand, within AO356_09125 at 2066.861 kb on - strand, within AO356_09125 at 2066.861 kb on - strand, within AO356_09125 at 2066.911 kb on + strand, within AO356_09125 at 2066.911 kb on + strand, within AO356_09125 at 2066.912 kb on - strand, within AO356_09125 at 2066.945 kb on + strand, within AO356_09125 at 2066.946 kb on - strand, within AO356_09125
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 2,063,701 + -0.4 2,063,701 + -0.1 2,063,702 - +1.5 2,063,702 - +0.2 2,063,728 + -0.0 2,063,729 - -0.1 2,063,920 + AO356_09115 0.21 +2.1 2,063,921 - AO356_09115 0.21 +0.4 2,064,031 + AO356_09115 0.33 +0.3 2,064,032 - AO356_09115 0.33 +0.6 2,064,112 + AO356_09115 0.42 +0.6 2,064,112 + AO356_09115 0.42 -0.4 2,064,112 + AO356_09115 0.42 -0.0 2,064,148 + AO356_09115 0.46 +0.1 2,064,148 + AO356_09115 0.46 +1.1 2,064,148 + AO356_09115 0.46 +0.6 2,064,148 + AO356_09115 0.46 -0.0 2,064,148 + AO356_09115 0.46 -1.0 2,064,148 + AO356_09115 0.46 +0.2 2,064,148 + AO356_09115 0.46 -0.6 2,064,149 - AO356_09115 0.46 +0.1 2,064,149 - AO356_09115 0.46 +0.4 2,064,151 + AO356_09115 0.47 +0.4 2,064,152 - AO356_09115 0.47 -0.8 2,064,152 - AO356_09115 0.47 +0.2 2,064,152 - AO356_09115 0.47 -0.4 2,064,187 + AO356_09115 0.51 -0.9 2,064,187 + AO356_09115 0.51 -0.0 2,064,187 + AO356_09115 0.51 +0.1 2,064,187 + AO356_09115 0.51 -0.0 2,064,188 - AO356_09115 0.51 -0.2 2,064,253 + AO356_09115 0.58 -0.2 2,064,254 - AO356_09115 0.58 +0.2 2,064,254 - AO356_09115 0.58 +0.7 2,064,302 + AO356_09115 0.64 +0.3 2,064,357 - AO356_09115 0.70 +0.1 2,064,359 - AO356_09115 0.70 +0.6 2,064,440 + AO356_09115 0.79 -1.1 2,064,440 + AO356_09115 0.79 +0.9 2,064,441 - AO356_09115 0.80 -0.3 2,064,528 - AO356_09115 0.89 -1.9 2,064,528 - AO356_09115 0.89 -0.5 2,064,608 + -0.5 2,064,608 + +0.0 2,064,608 + +0.7 2,064,614 + +0.3 2,064,974 + AO356_09120 0.23 +0.8 2,064,975 - AO356_09120 0.23 +1.1 2,064,975 - AO356_09120 0.23 -0.4 2,064,975 - AO356_09120 0.23 +1.2 2,065,408 + AO356_09120 0.55 -0.6 2,065,408 + AO356_09120 0.55 +0.7 2,065,409 - AO356_09120 0.55 +0.6 2,066,044 + +0.2 2,066,089 + +0.7 2,066,089 + +0.4 2,066,089 + +0.8 2,066,141 - +0.5 2,066,152 + -0.3 2,066,152 + +0.6 2,066,152 + +0.1 2,066,153 - +1.7 2,066,153 - +0.7 2,066,153 - -0.4 2,066,153 - +1.0 2,066,205 + -0.1 2,066,212 - +1.0 2,066,212 - +0.1 2,066,216 - +0.8 2,066,216 - +0.4 2,066,216 - -0.4 2,066,216 - -1.4 2,066,216 - -0.1 2,066,216 - -0.2 2,066,216 - -0.3 2,066,220 + +0.6 2,066,221 - +0.3 2,066,221 - +0.7 2,066,243 + +0.4 2,066,243 + -0.1 2,066,243 + -0.4 2,066,243 + +0.7 2,066,243 + -0.2 2,066,243 + +0.0 2,066,243 + +0.2 2,066,244 - -0.0 2,066,244 - +1.0 2,066,251 + -0.0 2,066,251 + +0.2 2,066,251 + +0.2 2,066,251 + -0.3 2,066,251 + +0.4 2,066,252 - -0.3 2,066,252 - -0.4 2,066,257 + +0.7 2,066,426 + -0.4 2,066,426 + -0.0 2,066,426 + +0.9 2,066,427 - -1.7 2,066,427 - +0.1 2,066,474 + AO356_09125 0.11 +1.7 2,066,584 + AO356_09125 0.22 -0.2 2,066,739 + AO356_09125 0.37 +1.6 2,066,739 + AO356_09125 0.37 -0.1 2,066,739 + AO356_09125 0.37 -0.3 2,066,739 + AO356_09125 0.37 -0.1 2,066,739 + AO356_09125 0.37 -0.8 2,066,740 - AO356_09125 0.37 -1.2 2,066,860 + AO356_09125 0.49 +1.1 2,066,861 - AO356_09125 0.50 -0.7 2,066,861 - AO356_09125 0.50 -0.7 2,066,861 - AO356_09125 0.50 -0.2 2,066,911 + AO356_09125 0.54 -0.5 2,066,911 + AO356_09125 0.54 -0.3 2,066,912 - AO356_09125 0.55 -0.3 2,066,945 + AO356_09125 0.58 -0.7 2,066,946 - AO356_09125 0.58 +1.5
Or see this region's nucleotide sequence