Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08365 and AO356_08370 are separated by 151 nucleotides AO356_08370 and AO356_08375 are separated by 9 nucleotides AO356_08375 and AO356_08380 are separated by 7 nucleotides AO356_08380 and AO356_08385 overlap by 4 nucleotides AO356_08385 and AO356_08390 are separated by 141 nucleotides
AO356_08365: AO356_08365 - Urease maturation and nickel insertion protein UreD <small>(from data)</small>, at 1,880,993 to 1,881,844
_08365
AO356_08370: AO356_08370 - urease subunit gamma, at 1,881,996 to 1,882,298
_08370
AO356_08375: AO356_08375 - acetyltransferase, at 1,882,308 to 1,882,841
_08375
AO356_08380: AO356_08380 - acetyltransferase, at 1,882,849 to 1,883,382
_08380
AO356_08385: AO356_08385 - urease subunit beta, at 1,883,379 to 1,883,684
_08385
AO356_08390: AO356_08390 - Urease (EC 3.5.1.5) <small>(from data)</small>, at 1,883,826 to 1,885,526
_08390
Position (kb) 1882
1883 Strain fitness (log2 ratio) -2
-1
0
1
2 at 1881.437 kb on + strand, within AO356_08365 at 1881.438 kb on - strand, within AO356_08365 at 1881.838 kb on + strand at 1881.950 kb on + strand at 1881.950 kb on + strand at 1881.950 kb on + strand at 1881.950 kb on + strand at 1881.950 kb on + strand at 1881.950 kb on + strand at 1881.950 kb on + strand at 1881.951 kb on - strand at 1881.951 kb on - strand at 1881.951 kb on - strand at 1881.951 kb on - strand at 1881.951 kb on - strand at 1881.951 kb on - strand at 1881.951 kb on - strand at 1881.951 kb on - strand at 1881.951 kb on - strand at 1881.960 kb on + strand at 1881.974 kb on + strand at 1882.107 kb on + strand, within AO356_08370 at 1882.107 kb on + strand, within AO356_08370 at 1882.107 kb on + strand, within AO356_08370 at 1882.108 kb on - strand, within AO356_08370 at 1882.365 kb on + strand, within AO356_08375 at 1882.366 kb on - strand, within AO356_08375 at 1882.573 kb on - strand, within AO356_08375 at 1882.573 kb on - strand, within AO356_08375 at 1883.067 kb on - strand, within AO356_08380 at 1883.230 kb on + strand, within AO356_08380 at 1883.285 kb on - strand, within AO356_08380 at 1883.311 kb on + strand, within AO356_08380 at 1883.335 kb on + strand at 1883.335 kb on + strand at 1883.336 kb on - strand at 1883.336 kb on - strand at 1883.336 kb on - strand at 1883.336 kb on - strand at 1883.353 kb on + strand at 1883.353 kb on + strand at 1883.354 kb on - strand at 1883.354 kb on - strand at 1883.354 kb on - strand at 1883.394 kb on + strand at 1883.394 kb on + strand at 1883.496 kb on + strand, within AO356_08385 at 1883.497 kb on - strand, within AO356_08385 at 1883.497 kb on - strand, within AO356_08385 at 1883.682 kb on + strand at 1883.682 kb on + strand at 1883.682 kb on + strand at 1883.683 kb on - strand at 1883.683 kb on - strand at 1883.683 kb on - strand at 1883.689 kb on + strand at 1883.689 kb on + strand at 1883.689 kb on + strand at 1883.689 kb on + strand at 1883.690 kb on - strand at 1883.690 kb on - strand at 1883.690 kb on - strand at 1883.690 kb on - strand at 1883.737 kb on + strand at 1883.737 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,881,437 + AO356_08365 0.52 -1.0 1,881,438 - AO356_08365 0.52 -0.4 1,881,838 + +0.5 1,881,950 + +0.7 1,881,950 + +0.4 1,881,950 + +1.5 1,881,950 + -0.1 1,881,950 + -0.7 1,881,950 + +0.3 1,881,950 + -1.0 1,881,951 - +0.4 1,881,951 - -0.7 1,881,951 - -0.0 1,881,951 - +0.2 1,881,951 - +0.6 1,881,951 - -0.2 1,881,951 - -0.4 1,881,951 - -0.5 1,881,951 - -0.1 1,881,960 + +0.9 1,881,974 + -1.0 1,882,107 + AO356_08370 0.37 -0.3 1,882,107 + AO356_08370 0.37 -0.1 1,882,107 + AO356_08370 0.37 -0.1 1,882,108 - AO356_08370 0.37 -0.1 1,882,365 + AO356_08375 0.11 +0.7 1,882,366 - AO356_08375 0.11 +1.0 1,882,573 - AO356_08375 0.50 -0.1 1,882,573 - AO356_08375 0.50 +0.9 1,883,067 - AO356_08380 0.41 +1.7 1,883,230 + AO356_08380 0.71 -0.6 1,883,285 - AO356_08380 0.82 -0.4 1,883,311 + AO356_08380 0.87 -0.3 1,883,335 + -1.2 1,883,335 + -0.3 1,883,336 - +0.0 1,883,336 - -0.4 1,883,336 - +0.1 1,883,336 - +0.8 1,883,353 + +0.5 1,883,353 + -1.3 1,883,354 - -0.4 1,883,354 - +0.1 1,883,354 - -0.9 1,883,394 + +0.3 1,883,394 + +0.3 1,883,496 + AO356_08385 0.38 +0.5 1,883,497 - AO356_08385 0.39 +0.1 1,883,497 - AO356_08385 0.39 -1.0 1,883,682 + -1.4 1,883,682 + +0.7 1,883,682 + -0.4 1,883,683 - +0.6 1,883,683 - -0.0 1,883,683 - -1.3 1,883,689 + -1.8 1,883,689 + +0.3 1,883,689 + -1.3 1,883,689 + -0.5 1,883,690 - -1.0 1,883,690 - -0.2 1,883,690 - +1.8 1,883,690 - +0.0 1,883,737 + +0.1 1,883,737 + +1.0
Or see this region's nucleotide sequence