Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08315 and AO356_08320 are separated by 46 nucleotides AO356_08320 and AO356_08325 are separated by 57 nucleotides AO356_08325 and AO356_08330 are separated by 82 nucleotides
AO356_08315: AO356_08315 - hypothetical protein, at 1,869,684 to 1,870,082
_08315
AO356_08320: AO356_08320 - copper resistance protein CopZ, at 1,870,129 to 1,870,608
_08320
AO356_08325: AO356_08325 - predicted copper homeostasis protein (from data) , at 1,870,666 to 1,871,070
_08325
AO356_08330: AO356_08330 - TonB-dependent receptor, at 1,871,153 to 1,873,279
_08330
Position (kb)
1870
1871
1872 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1869.972 kb on + strand, within AO356_08315 at 1869.972 kb on + strand, within AO356_08315 at 1870.094 kb on + strand at 1870.094 kb on + strand at 1870.095 kb on - strand at 1870.143 kb on + strand at 1870.143 kb on + strand at 1870.144 kb on - strand at 1870.144 kb on - strand at 1870.195 kb on + strand, within AO356_08320 at 1870.195 kb on + strand, within AO356_08320 at 1870.195 kb on + strand, within AO356_08320 at 1870.196 kb on - strand, within AO356_08320 at 1870.196 kb on - strand, within AO356_08320 at 1870.196 kb on - strand, within AO356_08320 at 1870.196 kb on - strand, within AO356_08320 at 1870.196 kb on - strand, within AO356_08320 at 1870.270 kb on + strand, within AO356_08320 at 1870.271 kb on - strand, within AO356_08320 at 1870.271 kb on - strand, within AO356_08320 at 1870.447 kb on + strand, within AO356_08320 at 1870.606 kb on + strand at 1870.612 kb on + strand at 1870.984 kb on + strand, within AO356_08325 at 1870.985 kb on - strand, within AO356_08325 at 1870.985 kb on - strand, within AO356_08325 at 1870.985 kb on - strand, within AO356_08325 at 1870.985 kb on - strand, within AO356_08325 at 1871.095 kb on + strand at 1871.095 kb on + strand at 1871.096 kb on - strand at 1871.096 kb on - strand at 1871.130 kb on + strand at 1871.130 kb on + strand at 1871.131 kb on - strand at 1871.427 kb on - strand, within AO356_08330 at 1871.582 kb on + strand, within AO356_08330 at 1871.582 kb on + strand, within AO356_08330 at 1871.582 kb on + strand, within AO356_08330 at 1871.582 kb on + strand, within AO356_08330 at 1871.582 kb on + strand, within AO356_08330 at 1871.582 kb on + strand, within AO356_08330 at 1871.582 kb on + strand, within AO356_08330 at 1871.583 kb on - strand, within AO356_08330 at 1871.583 kb on - strand, within AO356_08330 at 1871.583 kb on - strand, within AO356_08330 at 1871.583 kb on - strand, within AO356_08330 at 1871.583 kb on - strand, within AO356_08330 at 1871.583 kb on - strand, within AO356_08330 at 1871.583 kb on - strand, within AO356_08330 at 1871.583 kb on - strand, within AO356_08330 at 1871.584 kb on + strand, within AO356_08330 at 1871.584 kb on + strand, within AO356_08330 at 1871.584 kb on + strand, within AO356_08330 at 1871.584 kb on + strand, within AO356_08330 at 1871.584 kb on + strand, within AO356_08330 at 1871.584 kb on + strand, within AO356_08330 at 1871.584 kb on + strand, within AO356_08330 at 1871.584 kb on + strand, within AO356_08330 at 1871.585 kb on - strand, within AO356_08330 at 1871.585 kb on - strand, within AO356_08330 at 1871.600 kb on + strand, within AO356_08330 at 1871.600 kb on + strand, within AO356_08330 at 1871.795 kb on + strand, within AO356_08330 at 1871.795 kb on + strand, within AO356_08330 at 1871.795 kb on + strand, within AO356_08330 at 1871.795 kb on + strand, within AO356_08330 at 1871.795 kb on + strand, within AO356_08330 at 1871.795 kb on + strand, within AO356_08330 at 1871.796 kb on - strand, within AO356_08330 at 1871.799 kb on + strand, within AO356_08330 at 1871.799 kb on + strand, within AO356_08330 at 1871.799 kb on + strand, within AO356_08330 at 1871.799 kb on + strand, within AO356_08330 at 1871.799 kb on + strand, within AO356_08330 at 1871.799 kb on + strand, within AO356_08330 at 1871.800 kb on - strand, within AO356_08330 at 1871.800 kb on - strand, within AO356_08330 at 1871.800 kb on - strand, within AO356_08330 at 1871.800 kb on - strand, within AO356_08330 at 1871.800 kb on - strand, within AO356_08330 at 1871.870 kb on + strand, within AO356_08330 at 1871.967 kb on - strand, within AO356_08330
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,869,972 + AO356_08315 0.72 +0.2 1,869,972 + AO356_08315 0.72 -0.4 1,870,094 + -0.1 1,870,094 + +0.1 1,870,095 - -0.4 1,870,143 + -0.0 1,870,143 + -0.2 1,870,144 - -0.3 1,870,144 - -0.5 1,870,195 + AO356_08320 0.14 -0.8 1,870,195 + AO356_08320 0.14 +0.4 1,870,195 + AO356_08320 0.14 -0.3 1,870,196 - AO356_08320 0.14 +0.1 1,870,196 - AO356_08320 0.14 -2.0 1,870,196 - AO356_08320 0.14 +2.0 1,870,196 - AO356_08320 0.14 -0.5 1,870,196 - AO356_08320 0.14 +0.1 1,870,270 + AO356_08320 0.29 +0.8 1,870,271 - AO356_08320 0.30 -0.9 1,870,271 - AO356_08320 0.30 +1.0 1,870,447 + AO356_08320 0.66 -0.1 1,870,606 + -0.2 1,870,612 + -0.1 1,870,984 + AO356_08325 0.79 +0.7 1,870,985 - AO356_08325 0.79 +0.2 1,870,985 - AO356_08325 0.79 +1.3 1,870,985 - AO356_08325 0.79 +0.0 1,870,985 - AO356_08325 0.79 +0.7 1,871,095 + +1.1 1,871,095 + +0.5 1,871,096 - -1.9 1,871,096 - +0.5 1,871,130 + +1.0 1,871,130 + -0.4 1,871,131 - +0.7 1,871,427 - AO356_08330 0.13 +1.1 1,871,582 + AO356_08330 0.20 +0.8 1,871,582 + AO356_08330 0.20 +0.2 1,871,582 + AO356_08330 0.20 +0.8 1,871,582 + AO356_08330 0.20 +0.7 1,871,582 + AO356_08330 0.20 -0.0 1,871,582 + AO356_08330 0.20 +1.3 1,871,582 + AO356_08330 0.20 -0.0 1,871,583 - AO356_08330 0.20 -0.3 1,871,583 - AO356_08330 0.20 +0.6 1,871,583 - AO356_08330 0.20 +0.1 1,871,583 - AO356_08330 0.20 -0.9 1,871,583 - AO356_08330 0.20 -1.4 1,871,583 - AO356_08330 0.20 -1.1 1,871,583 - AO356_08330 0.20 -1.2 1,871,583 - AO356_08330 0.20 -0.2 1,871,584 + AO356_08330 0.20 +0.8 1,871,584 + AO356_08330 0.20 -1.5 1,871,584 + AO356_08330 0.20 -0.6 1,871,584 + AO356_08330 0.20 +0.3 1,871,584 + AO356_08330 0.20 +0.3 1,871,584 + AO356_08330 0.20 +0.2 1,871,584 + AO356_08330 0.20 +0.7 1,871,584 + AO356_08330 0.20 -0.9 1,871,585 - AO356_08330 0.20 -0.7 1,871,585 - AO356_08330 0.20 +1.0 1,871,600 + AO356_08330 0.21 +1.5 1,871,600 + AO356_08330 0.21 +0.8 1,871,795 + AO356_08330 0.30 +0.3 1,871,795 + AO356_08330 0.30 +1.2 1,871,795 + AO356_08330 0.30 +0.1 1,871,795 + AO356_08330 0.30 -1.2 1,871,795 + AO356_08330 0.30 -0.0 1,871,795 + AO356_08330 0.30 +0.4 1,871,796 - AO356_08330 0.30 -0.5 1,871,799 + AO356_08330 0.30 -0.8 1,871,799 + AO356_08330 0.30 +0.5 1,871,799 + AO356_08330 0.30 +0.6 1,871,799 + AO356_08330 0.30 -0.2 1,871,799 + AO356_08330 0.30 +0.1 1,871,799 + AO356_08330 0.30 -0.3 1,871,800 - AO356_08330 0.30 -0.4 1,871,800 - AO356_08330 0.30 +0.0 1,871,800 - AO356_08330 0.30 +0.1 1,871,800 - AO356_08330 0.30 -0.3 1,871,800 - AO356_08330 0.30 +0.5 1,871,870 + AO356_08330 0.34 -1.1 1,871,967 - AO356_08330 0.38 +0.5
Or see this region's nucleotide sequence