Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_08005 and AO356_08010 are separated by 124 nucleotides AO356_08010 and AO356_08015 are separated by 334 nucleotides
AO356_08005: AO356_08005 - 8-oxoguanine deaminase, at 1,792,523 to 1,793,881
_08005
AO356_08010: AO356_08010 - calcium:proton antiporter, at 1,794,006 to 1,795,097
_08010
AO356_08015: AO356_08015 - ABC transporter substrate-binding protein, at 1,795,432 to 1,796,514
_08015
Position (kb)
1794
1795
1796 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1793.208 kb on + strand, within AO356_08005 at 1793.209 kb on - strand, within AO356_08005 at 1793.209 kb on - strand, within AO356_08005 at 1793.209 kb on - strand, within AO356_08005 at 1793.209 kb on - strand, within AO356_08005 at 1793.289 kb on - strand, within AO356_08005 at 1793.289 kb on - strand, within AO356_08005 at 1793.289 kb on - strand, within AO356_08005 at 1793.473 kb on - strand, within AO356_08005 at 1793.543 kb on + strand, within AO356_08005 at 1793.544 kb on - strand, within AO356_08005 at 1793.544 kb on - strand, within AO356_08005 at 1793.544 kb on - strand, within AO356_08005 at 1793.544 kb on - strand, within AO356_08005 at 1793.544 kb on - strand, within AO356_08005 at 1793.544 kb on - strand, within AO356_08005 at 1793.544 kb on - strand, within AO356_08005 at 1793.562 kb on - strand, within AO356_08005 at 1793.562 kb on - strand, within AO356_08005 at 1793.736 kb on + strand, within AO356_08005 at 1793.736 kb on + strand, within AO356_08005 at 1793.736 kb on + strand, within AO356_08005 at 1793.736 kb on + strand, within AO356_08005 at 1793.998 kb on + strand at 1793.998 kb on + strand at 1793.998 kb on + strand at 1793.999 kb on - strand at 1793.999 kb on - strand at 1793.999 kb on - strand at 1793.999 kb on - strand at 1794.007 kb on + strand at 1794.032 kb on + strand at 1794.032 kb on + strand at 1794.032 kb on + strand at 1794.032 kb on + strand at 1794.032 kb on + strand at 1794.033 kb on - strand at 1794.033 kb on - strand at 1794.178 kb on + strand, within AO356_08010 at 1794.178 kb on + strand, within AO356_08010 at 1794.511 kb on + strand, within AO356_08010 at 1794.511 kb on + strand, within AO356_08010 at 1794.515 kb on + strand, within AO356_08010 at 1794.515 kb on + strand, within AO356_08010 at 1794.515 kb on + strand, within AO356_08010 at 1794.515 kb on + strand, within AO356_08010 at 1794.515 kb on + strand, within AO356_08010 at 1794.515 kb on + strand, within AO356_08010 at 1794.516 kb on - strand, within AO356_08010 at 1794.516 kb on - strand, within AO356_08010 at 1794.516 kb on - strand, within AO356_08010 at 1794.516 kb on - strand, within AO356_08010 at 1794.516 kb on - strand, within AO356_08010 at 1794.516 kb on - strand, within AO356_08010 at 1794.517 kb on + strand, within AO356_08010 at 1794.517 kb on + strand, within AO356_08010 at 1794.517 kb on + strand, within AO356_08010 at 1794.518 kb on - strand, within AO356_08010 at 1794.529 kb on + strand, within AO356_08010 at 1794.530 kb on - strand, within AO356_08010 at 1794.568 kb on + strand, within AO356_08010 at 1794.568 kb on + strand, within AO356_08010 at 1794.568 kb on + strand, within AO356_08010 at 1794.569 kb on - strand, within AO356_08010 at 1794.569 kb on - strand, within AO356_08010 at 1794.604 kb on + strand, within AO356_08010 at 1794.604 kb on + strand, within AO356_08010 at 1794.605 kb on - strand, within AO356_08010 at 1794.666 kb on - strand, within AO356_08010 at 1794.682 kb on + strand, within AO356_08010 at 1794.682 kb on + strand, within AO356_08010 at 1794.682 kb on + strand, within AO356_08010 at 1794.683 kb on - strand, within AO356_08010 at 1794.683 kb on - strand, within AO356_08010 at 1794.683 kb on - strand, within AO356_08010 at 1794.683 kb on - strand, within AO356_08010 at 1794.683 kb on - strand, within AO356_08010 at 1794.707 kb on - strand, within AO356_08010 at 1794.787 kb on + strand, within AO356_08010 at 1794.787 kb on + strand, within AO356_08010 at 1794.787 kb on + strand, within AO356_08010 at 1795.027 kb on - strand at 1795.040 kb on + strand at 1795.041 kb on - strand at 1795.041 kb on - strand at 1795.041 kb on - strand at 1795.041 kb on - strand at 1795.131 kb on + strand at 1795.132 kb on - strand at 1795.132 kb on - strand at 1795.140 kb on + strand at 1795.140 kb on + strand at 1795.209 kb on + strand at 1795.209 kb on + strand at 1795.209 kb on + strand at 1795.209 kb on + strand at 1795.209 kb on + strand at 1795.209 kb on + strand at 1795.209 kb on + strand at 1795.210 kb on - strand at 1795.210 kb on - strand at 1795.210 kb on - strand at 1795.210 kb on - strand at 1795.272 kb on + strand at 1795.272 kb on + strand at 1795.272 kb on + strand at 1795.272 kb on + strand at 1795.272 kb on + strand at 1795.272 kb on + strand at 1795.273 kb on - strand at 1795.273 kb on - strand at 1795.273 kb on - strand at 1795.273 kb on - strand at 1795.273 kb on - strand at 1795.308 kb on - strand at 1795.541 kb on - strand, within AO356_08015 at 1795.541 kb on - strand, within AO356_08015 at 1795.541 kb on - strand, within AO356_08015 at 1795.573 kb on + strand, within AO356_08015 at 1795.573 kb on + strand, within AO356_08015 at 1795.573 kb on + strand, within AO356_08015 at 1795.573 kb on + strand, within AO356_08015 at 1795.573 kb on + strand, within AO356_08015 at 1795.574 kb on - strand, within AO356_08015 at 1795.574 kb on - strand, within AO356_08015 at 1795.574 kb on - strand, within AO356_08015 at 1795.574 kb on - strand, within AO356_08015 at 1795.636 kb on + strand, within AO356_08015 at 1795.636 kb on + strand, within AO356_08015 at 1795.636 kb on + strand, within AO356_08015 at 1795.636 kb on + strand, within AO356_08015 at 1795.636 kb on + strand, within AO356_08015 at 1795.636 kb on + strand, within AO356_08015 at 1795.636 kb on + strand, within AO356_08015 at 1795.637 kb on - strand, within AO356_08015 at 1795.637 kb on - strand, within AO356_08015 at 1795.702 kb on + strand, within AO356_08015 at 1795.702 kb on + strand, within AO356_08015 at 1795.703 kb on - strand, within AO356_08015 at 1795.703 kb on - strand, within AO356_08015 at 1795.733 kb on - strand, within AO356_08015 at 1795.798 kb on + strand, within AO356_08015 at 1795.798 kb on + strand, within AO356_08015 at 1795.825 kb on + strand, within AO356_08015 at 1795.825 kb on + strand, within AO356_08015 at 1795.825 kb on + strand, within AO356_08015 at 1795.826 kb on - strand, within AO356_08015 at 1795.826 kb on - strand, within AO356_08015 at 1795.826 kb on - strand, within AO356_08015 at 1795.826 kb on - strand, within AO356_08015 at 1795.840 kb on + strand, within AO356_08015 at 1795.841 kb on - strand, within AO356_08015 at 1795.841 kb on - strand, within AO356_08015 at 1795.853 kb on - strand, within AO356_08015 at 1795.903 kb on + strand, within AO356_08015 at 1795.904 kb on - strand, within AO356_08015 at 1795.972 kb on + strand, within AO356_08015 at 1795.972 kb on + strand, within AO356_08015 at 1795.972 kb on + strand, within AO356_08015 at 1795.973 kb on - strand, within AO356_08015 at 1795.973 kb on - strand, within AO356_08015
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,793,208 + AO356_08005 0.50 -1.3 1,793,209 - AO356_08005 0.50 +0.2 1,793,209 - AO356_08005 0.50 +0.7 1,793,209 - AO356_08005 0.50 -0.6 1,793,209 - AO356_08005 0.50 -0.3 1,793,289 - AO356_08005 0.56 -0.1 1,793,289 - AO356_08005 0.56 -0.3 1,793,289 - AO356_08005 0.56 -0.2 1,793,473 - AO356_08005 0.70 -1.5 1,793,543 + AO356_08005 0.75 +1.1 1,793,544 - AO356_08005 0.75 -0.7 1,793,544 - AO356_08005 0.75 -0.9 1,793,544 - AO356_08005 0.75 -0.1 1,793,544 - AO356_08005 0.75 +1.8 1,793,544 - AO356_08005 0.75 -0.4 1,793,544 - AO356_08005 0.75 -1.8 1,793,544 - AO356_08005 0.75 -0.6 1,793,562 - AO356_08005 0.76 +1.1 1,793,562 - AO356_08005 0.76 +0.4 1,793,736 + AO356_08005 0.89 +1.4 1,793,736 + AO356_08005 0.89 -0.1 1,793,736 + AO356_08005 0.89 -0.3 1,793,736 + AO356_08005 0.89 +0.6 1,793,998 + +0.4 1,793,998 + +0.1 1,793,998 + +0.4 1,793,999 - -0.2 1,793,999 - -0.0 1,793,999 - +0.7 1,793,999 - -0.2 1,794,007 + -0.1 1,794,032 + +0.3 1,794,032 + -0.7 1,794,032 + +0.4 1,794,032 + -0.0 1,794,032 + +0.5 1,794,033 - -1.1 1,794,033 - -0.3 1,794,178 + AO356_08010 0.16 +0.2 1,794,178 + AO356_08010 0.16 -0.2 1,794,511 + AO356_08010 0.46 +0.5 1,794,511 + AO356_08010 0.46 +0.4 1,794,515 + AO356_08010 0.47 -0.3 1,794,515 + AO356_08010 0.47 +0.6 1,794,515 + AO356_08010 0.47 +0.1 1,794,515 + AO356_08010 0.47 -0.2 1,794,515 + AO356_08010 0.47 -0.8 1,794,515 + AO356_08010 0.47 +0.1 1,794,516 - AO356_08010 0.47 -2.9 1,794,516 - AO356_08010 0.47 -1.1 1,794,516 - AO356_08010 0.47 +0.1 1,794,516 - AO356_08010 0.47 -0.6 1,794,516 - AO356_08010 0.47 -1.6 1,794,516 - AO356_08010 0.47 +0.3 1,794,517 + AO356_08010 0.47 -0.6 1,794,517 + AO356_08010 0.47 -0.2 1,794,517 + AO356_08010 0.47 -0.4 1,794,518 - AO356_08010 0.47 +0.5 1,794,529 + AO356_08010 0.48 +0.6 1,794,530 - AO356_08010 0.48 -0.1 1,794,568 + AO356_08010 0.51 +0.6 1,794,568 + AO356_08010 0.51 -0.8 1,794,568 + AO356_08010 0.51 -0.6 1,794,569 - AO356_08010 0.52 +0.0 1,794,569 - AO356_08010 0.52 -0.9 1,794,604 + AO356_08010 0.55 -0.6 1,794,604 + AO356_08010 0.55 +0.7 1,794,605 - AO356_08010 0.55 +0.1 1,794,666 - AO356_08010 0.60 -0.1 1,794,682 + AO356_08010 0.62 +0.4 1,794,682 + AO356_08010 0.62 -1.0 1,794,682 + AO356_08010 0.62 -0.2 1,794,683 - AO356_08010 0.62 +1.0 1,794,683 - AO356_08010 0.62 +0.2 1,794,683 - AO356_08010 0.62 +0.0 1,794,683 - AO356_08010 0.62 +0.4 1,794,683 - AO356_08010 0.62 +0.7 1,794,707 - AO356_08010 0.64 -0.7 1,794,787 + AO356_08010 0.72 -1.3 1,794,787 + AO356_08010 0.72 +0.3 1,794,787 + AO356_08010 0.72 +0.5 1,795,027 - +0.6 1,795,040 + -0.3 1,795,041 - -2.0 1,795,041 - -0.0 1,795,041 - -0.6 1,795,041 - +0.3 1,795,131 + +1.0 1,795,132 - +0.4 1,795,132 - +0.3 1,795,140 + +0.4 1,795,140 + -0.4 1,795,209 + -0.1 1,795,209 + -1.9 1,795,209 + +0.1 1,795,209 + +0.3 1,795,209 + -0.0 1,795,209 + +0.2 1,795,209 + +0.4 1,795,210 - -0.5 1,795,210 - +0.5 1,795,210 - -1.0 1,795,210 - -1.4 1,795,272 + -1.2 1,795,272 + +0.9 1,795,272 + +0.0 1,795,272 + -1.6 1,795,272 + +0.0 1,795,272 + +0.7 1,795,273 - -0.3 1,795,273 - -0.0 1,795,273 - +0.9 1,795,273 - -0.5 1,795,273 - +0.2 1,795,308 - +0.9 1,795,541 - AO356_08015 0.10 -0.3 1,795,541 - AO356_08015 0.10 +1.1 1,795,541 - AO356_08015 0.10 -0.5 1,795,573 + AO356_08015 0.13 -0.1 1,795,573 + AO356_08015 0.13 -1.1 1,795,573 + AO356_08015 0.13 +1.0 1,795,573 + AO356_08015 0.13 +0.7 1,795,573 + AO356_08015 0.13 -1.0 1,795,574 - AO356_08015 0.13 +0.3 1,795,574 - AO356_08015 0.13 -0.5 1,795,574 - AO356_08015 0.13 -0.1 1,795,574 - AO356_08015 0.13 +1.1 1,795,636 + AO356_08015 0.19 -0.1 1,795,636 + AO356_08015 0.19 -0.0 1,795,636 + AO356_08015 0.19 -0.2 1,795,636 + AO356_08015 0.19 -0.6 1,795,636 + AO356_08015 0.19 +0.1 1,795,636 + AO356_08015 0.19 -1.6 1,795,636 + AO356_08015 0.19 -0.4 1,795,637 - AO356_08015 0.19 +0.3 1,795,637 - AO356_08015 0.19 +0.2 1,795,702 + AO356_08015 0.25 -1.1 1,795,702 + AO356_08015 0.25 -0.6 1,795,703 - AO356_08015 0.25 +0.7 1,795,703 - AO356_08015 0.25 -1.2 1,795,733 - AO356_08015 0.28 +1.9 1,795,798 + AO356_08015 0.34 +1.2 1,795,798 + AO356_08015 0.34 +0.7 1,795,825 + AO356_08015 0.36 -0.0 1,795,825 + AO356_08015 0.36 +1.1 1,795,825 + AO356_08015 0.36 -0.1 1,795,826 - AO356_08015 0.36 +0.5 1,795,826 - AO356_08015 0.36 +0.1 1,795,826 - AO356_08015 0.36 +0.1 1,795,826 - AO356_08015 0.36 +0.4 1,795,840 + AO356_08015 0.38 -1.2 1,795,841 - AO356_08015 0.38 +0.5 1,795,841 - AO356_08015 0.38 +0.4 1,795,853 - AO356_08015 0.39 +0.6 1,795,903 + AO356_08015 0.43 +0.9 1,795,904 - AO356_08015 0.44 -0.9 1,795,972 + AO356_08015 0.50 -0.1 1,795,972 + AO356_08015 0.50 +0.2 1,795,972 + AO356_08015 0.50 +0.4 1,795,973 - AO356_08015 0.50 +0.6 1,795,973 - AO356_08015 0.50 -0.4
Or see this region's nucleotide sequence