Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_07915

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_07910 and AO356_07915 overlap by 4 nucleotidesAO356_07915 and AO356_07920 overlap by 4 nucleotides AO356_07910: AO356_07910 - exodeoxyribonuclease V subunit alpha, at 1,765,822 to 1,767,918 _07910 AO356_07915: AO356_07915 - exodeoxyribonuclease V subunit beta, at 1,767,915 to 1,771,604 _07915 AO356_07920: AO356_07920 - exodeoxyribonuclease V subunit gamma, at 1,771,601 to 1,775,053 _07920 Position (kb) 1767 1768 1769 1770 1771 1772Strain fitness (log2 ratio) -1 0 1at 1767.918 kb on + strandat 1767.918 kb on + strandat 1767.918 kb on + strandat 1767.919 kb on - strandat 1767.919 kb on - strandat 1768.022 kb on - strandat 1768.064 kb on - strandat 1768.142 kb on - strandat 1768.252 kb on + strandat 1768.810 kb on + strand, within AO356_07915at 1768.810 kb on + strand, within AO356_07915at 1769.222 kb on - strand, within AO356_07915at 1769.505 kb on - strand, within AO356_07915at 1770.292 kb on + strand, within AO356_07915at 1770.330 kb on - strand, within AO356_07915at 1771.209 kb on - strand, within AO356_07915at 1771.209 kb on - strand, within AO356_07915at 1771.209 kb on - strand, within AO356_07915at 1771.393 kb on - strandat 1771.782 kb on + strandat 1772.394 kb on + strand, within AO356_07920at 1772.395 kb on - strand, within AO356_07920at 1772.551 kb on - strand, within AO356_07920at 1772.551 kb on - strand, within AO356_07920

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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1,767,918 + +0.3
1,767,918 + -0.4
1,767,918 + -0.3
1,767,919 - +0.3
1,767,919 - -0.1
1,768,022 - -1.2
1,768,064 - -0.2
1,768,142 - -1.4
1,768,252 + -0.6
1,768,810 + AO356_07915 0.24 +0.8
1,768,810 + AO356_07915 0.24 -1.2
1,769,222 - AO356_07915 0.35 -1.0
1,769,505 - AO356_07915 0.43 +0.0
1,770,292 + AO356_07915 0.64 +0.7
1,770,330 - AO356_07915 0.65 -0.9
1,771,209 - AO356_07915 0.89 -0.7
1,771,209 - AO356_07915 0.89 -1.2
1,771,209 - AO356_07915 0.89 -0.9
1,771,393 - -1.0
1,771,782 + +1.0
1,772,394 + AO356_07920 0.23 -1.4
1,772,395 - AO356_07920 0.23 -0.1
1,772,551 - AO356_07920 0.28 -0.1
1,772,551 - AO356_07920 0.28 -1.0

Or see this region's nucleotide sequence