Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_07910

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_07900 and AO356_07905 overlap by 4 nucleotidesAO356_07905 and AO356_07910 are separated by 138 nucleotidesAO356_07910 and AO356_07915 overlap by 4 nucleotides AO356_07900: AO356_07900 - diguanylate cyclase, at 1,763,843 to 1,765,111 _07900 AO356_07905: AO356_07905 - hypothetical protein, at 1,765,108 to 1,765,683 _07905 AO356_07910: AO356_07910 - exodeoxyribonuclease V subunit alpha, at 1,765,822 to 1,767,918 _07910 AO356_07915: AO356_07915 - exodeoxyribonuclease V subunit beta, at 1,767,915 to 1,771,604 _07915 Position (kb) 1765 1766 1767 1768Strain fitness (log2 ratio) -2 -1 0 1at 1764.933 kb on + strand, within AO356_07900at 1764.933 kb on + strand, within AO356_07900at 1764.933 kb on + strand, within AO356_07900at 1764.934 kb on - strand, within AO356_07900at 1764.934 kb on - strand, within AO356_07900at 1764.934 kb on - strand, within AO356_07900at 1764.934 kb on - strand, within AO356_07900at 1764.934 kb on - strand, within AO356_07900at 1764.934 kb on - strand, within AO356_07900at 1764.934 kb on - strand, within AO356_07900at 1765.343 kb on + strand, within AO356_07905at 1765.451 kb on + strand, within AO356_07905at 1765.451 kb on + strand, within AO356_07905at 1765.451 kb on + strand, within AO356_07905at 1765.452 kb on - strand, within AO356_07905at 1765.452 kb on - strand, within AO356_07905at 1765.452 kb on - strand, within AO356_07905at 1765.511 kb on + strand, within AO356_07905at 1765.512 kb on - strand, within AO356_07905at 1765.529 kb on - strand, within AO356_07905at 1765.670 kb on - strandat 1765.707 kb on + strandat 1765.707 kb on + strandat 1765.707 kb on + strandat 1765.707 kb on + strandat 1765.707 kb on + strandat 1765.708 kb on - strandat 1765.708 kb on - strandat 1765.757 kb on + strandat 1765.757 kb on + strandat 1765.757 kb on + strandat 1765.757 kb on + strandat 1765.761 kb on + strandat 1765.761 kb on + strandat 1765.761 kb on + strandat 1765.762 kb on - strandat 1765.762 kb on - strandat 1765.762 kb on - strandat 1765.808 kb on + strandat 1765.809 kb on - strandat 1765.809 kb on - strandat 1765.809 kb on - strandat 1765.954 kb on + strandat 1765.955 kb on - strandat 1766.115 kb on + strand, within AO356_07910at 1766.793 kb on - strand, within AO356_07910at 1766.846 kb on - strand, within AO356_07910at 1767.918 kb on + strandat 1767.918 kb on + strandat 1767.918 kb on + strandat 1767.919 kb on - strandat 1767.919 kb on - strandat 1768.022 kb on - strandat 1768.064 kb on - strandat 1768.142 kb on - strandat 1768.252 kb on + strandat 1768.810 kb on + strand, within AO356_07915at 1768.810 kb on + strand, within AO356_07915

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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1,764,933 + AO356_07900 0.86 +0.4
1,764,933 + AO356_07900 0.86 -0.5
1,764,933 + AO356_07900 0.86 -0.6
1,764,934 - AO356_07900 0.86 +0.1
1,764,934 - AO356_07900 0.86 -0.4
1,764,934 - AO356_07900 0.86 -0.8
1,764,934 - AO356_07900 0.86 +0.2
1,764,934 - AO356_07900 0.86 -0.5
1,764,934 - AO356_07900 0.86 +0.1
1,764,934 - AO356_07900 0.86 +0.7
1,765,343 + AO356_07905 0.41 +0.1
1,765,451 + AO356_07905 0.60 +0.4
1,765,451 + AO356_07905 0.60 -0.7
1,765,451 + AO356_07905 0.60 -0.3
1,765,452 - AO356_07905 0.60 -0.6
1,765,452 - AO356_07905 0.60 -0.2
1,765,452 - AO356_07905 0.60 +1.0
1,765,511 + AO356_07905 0.70 -0.5
1,765,512 - AO356_07905 0.70 -2.6
1,765,529 - AO356_07905 0.73 +0.3
1,765,670 - +0.4
1,765,707 + -0.7
1,765,707 + +0.2
1,765,707 + +0.2
1,765,707 + -0.6
1,765,707 + -0.2
1,765,708 - +1.1
1,765,708 - -1.2
1,765,757 + +1.4
1,765,757 + +0.2
1,765,757 + +0.3
1,765,757 + +0.2
1,765,761 + -0.3
1,765,761 + +0.6
1,765,761 + -0.4
1,765,762 - +0.6
1,765,762 - -0.7
1,765,762 - +0.4
1,765,808 + +0.4
1,765,809 - -0.4
1,765,809 - +0.8
1,765,809 - -0.7
1,765,954 + -0.9
1,765,955 - -0.3
1,766,115 + AO356_07910 0.14 +0.8
1,766,793 - AO356_07910 0.46 -0.2
1,766,846 - AO356_07910 0.49 -1.7
1,767,918 + +0.3
1,767,918 + -0.4
1,767,918 + -0.3
1,767,919 - +0.3
1,767,919 - -0.1
1,768,022 - -1.2
1,768,064 - -0.2
1,768,142 - -1.4
1,768,252 + -0.6
1,768,810 + AO356_07915 0.24 +0.8
1,768,810 + AO356_07915 0.24 -1.2

Or see this region's nucleotide sequence