Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06680 and AO356_06685 are separated by 63 nucleotides AO356_06685 and AO356_06690 are separated by 43 nucleotides AO356_06690 and AO356_06695 overlap by 4 nucleotides
AO356_06680: AO356_06680 - preprotein translocase subunit SecD, at 1,474,897 to 1,476,765
_06680
AO356_06685: AO356_06685 - preprotein translocase subunit YajC, at 1,476,829 to 1,477,167
_06685
AO356_06690: AO356_06690 - queuine tRNA-ribosyltransferase, at 1,477,211 to 1,478,344
_06690
AO356_06695: AO356_06695 - S-adenosylmethionine:tRNA ribosyltransferase-isomerase, at 1,478,341 to 1,479,390
_06695
Position (kb)
1477
1478
1479 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1476.780 kb on - strand at 1476.817 kb on - strand at 1476.831 kb on - strand at 1476.831 kb on - strand at 1476.831 kb on - strand at 1476.831 kb on - strand at 1476.831 kb on - strand at 1476.831 kb on - strand at 1476.831 kb on - strand at 1476.917 kb on - strand, within AO356_06685 at 1477.056 kb on - strand, within AO356_06685 at 1477.150 kb on - strand at 1477.150 kb on - strand at 1477.156 kb on - strand at 1477.170 kb on - strand at 1477.188 kb on - strand at 1477.188 kb on - strand at 1477.188 kb on - strand at 1477.197 kb on - strand at 1477.197 kb on - strand at 1477.249 kb on - strand at 1477.249 kb on - strand at 1477.277 kb on - strand at 1477.310 kb on - strand at 1477.310 kb on - strand at 1477.393 kb on - strand, within AO356_06690 at 1477.420 kb on - strand, within AO356_06690 at 1477.420 kb on - strand, within AO356_06690 at 1477.420 kb on - strand, within AO356_06690 at 1477.604 kb on - strand, within AO356_06690 at 1478.156 kb on - strand, within AO356_06690 at 1478.223 kb on + strand, within AO356_06690 at 1478.224 kb on - strand, within AO356_06690 at 1478.344 kb on + strand at 1478.344 kb on + strand at 1478.344 kb on + strand at 1478.345 kb on - strand at 1478.345 kb on - strand at 1478.345 kb on - strand at 1478.345 kb on - strand at 1478.403 kb on - strand at 1478.403 kb on - strand at 1478.944 kb on + strand, within AO356_06695 at 1478.944 kb on + strand, within AO356_06695 at 1478.944 kb on + strand, within AO356_06695 at 1478.945 kb on - strand, within AO356_06695 at 1478.945 kb on - strand, within AO356_06695 at 1478.946 kb on + strand, within AO356_06695 at 1478.946 kb on + strand, within AO356_06695 at 1478.946 kb on + strand, within AO356_06695 at 1478.946 kb on + strand, within AO356_06695 at 1478.946 kb on + strand, within AO356_06695 at 1478.947 kb on - strand, within AO356_06695 at 1478.947 kb on - strand, within AO356_06695 at 1478.947 kb on - strand, within AO356_06695 at 1478.947 kb on - strand, within AO356_06695 at 1478.947 kb on - strand, within AO356_06695 at 1478.947 kb on - strand, within AO356_06695 at 1478.947 kb on - strand, within AO356_06695 at 1478.948 kb on + strand, within AO356_06695 at 1478.948 kb on + strand, within AO356_06695 at 1478.948 kb on + strand, within AO356_06695 at 1478.948 kb on + strand, within AO356_06695 at 1478.949 kb on - strand, within AO356_06695 at 1478.949 kb on - strand, within AO356_06695 at 1478.949 kb on - strand, within AO356_06695 at 1478.949 kb on - strand, within AO356_06695 at 1478.949 kb on - strand, within AO356_06695 at 1478.949 kb on - strand, within AO356_06695 at 1478.949 kb on - strand, within AO356_06695 at 1479.211 kb on - strand, within AO356_06695
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,476,780 - +1.4 1,476,817 - +0.9 1,476,831 - +0.3 1,476,831 - -0.5 1,476,831 - -0.1 1,476,831 - +0.5 1,476,831 - +0.5 1,476,831 - -0.6 1,476,831 - -0.2 1,476,917 - AO356_06685 0.26 +0.6 1,477,056 - AO356_06685 0.67 -0.8 1,477,150 - -1.1 1,477,150 - -0.2 1,477,156 - -0.2 1,477,170 - -1.4 1,477,188 - -0.2 1,477,188 - -0.3 1,477,188 - +0.4 1,477,197 - +0.9 1,477,197 - -0.2 1,477,249 - -0.0 1,477,249 - -0.2 1,477,277 - +0.2 1,477,310 - +0.4 1,477,310 - +1.2 1,477,393 - AO356_06690 0.16 +1.2 1,477,420 - AO356_06690 0.18 +0.4 1,477,420 - AO356_06690 0.18 +0.8 1,477,420 - AO356_06690 0.18 +2.0 1,477,604 - AO356_06690 0.35 +3.2 1,478,156 - AO356_06690 0.83 +1.0 1,478,223 + AO356_06690 0.89 -0.9 1,478,224 - AO356_06690 0.89 +0.2 1,478,344 + +0.1 1,478,344 + +1.0 1,478,344 + -0.8 1,478,345 - +0.9 1,478,345 - -0.8 1,478,345 - +0.1 1,478,345 - +1.1 1,478,403 - -0.6 1,478,403 - +0.4 1,478,944 + AO356_06695 0.57 -0.6 1,478,944 + AO356_06695 0.57 +1.4 1,478,944 + AO356_06695 0.57 +1.3 1,478,945 - AO356_06695 0.58 +0.8 1,478,945 - AO356_06695 0.58 +0.8 1,478,946 + AO356_06695 0.58 +1.1 1,478,946 + AO356_06695 0.58 -0.2 1,478,946 + AO356_06695 0.58 +0.8 1,478,946 + AO356_06695 0.58 -0.3 1,478,946 + AO356_06695 0.58 +2.6 1,478,947 - AO356_06695 0.58 -1.2 1,478,947 - AO356_06695 0.58 -2.9 1,478,947 - AO356_06695 0.58 -0.8 1,478,947 - AO356_06695 0.58 +0.5 1,478,947 - AO356_06695 0.58 -0.1 1,478,947 - AO356_06695 0.58 +0.2 1,478,947 - AO356_06695 0.58 -0.6 1,478,948 + AO356_06695 0.58 -0.0 1,478,948 + AO356_06695 0.58 +0.1 1,478,948 + AO356_06695 0.58 -0.6 1,478,948 + AO356_06695 0.58 +0.7 1,478,949 - AO356_06695 0.58 -0.6 1,478,949 - AO356_06695 0.58 +1.0 1,478,949 - AO356_06695 0.58 +0.2 1,478,949 - AO356_06695 0.58 +1.7 1,478,949 - AO356_06695 0.58 -0.7 1,478,949 - AO356_06695 0.58 -2.0 1,478,949 - AO356_06695 0.58 -1.9 1,479,211 - AO356_06695 0.83 +0.9
Or see this region's nucleotide sequence