Strain Fitness in Pseudomonas fluorescens FW300-N2C3 around AO356_06650

Experiment: Thallium(I) acetate 0.008 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntAO356_06645 and AO356_06650 are separated by 50 nucleotidesAO356_06650 and AO356_06655 are separated by 363 nucleotides AO356_06645: AO356_06645 - cysteine desulfurase IscS, at 1,468,426 to 1,469,640 _06645 AO356_06650: AO356_06650 - transcriptional regulator, at 1,469,691 to 1,470,182 _06650 AO356_06655: AO356_06655 - serine acetyltransferase, at 1,470,546 to 1,471,322 _06655 Position (kb) 1469 1470 1471Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1469.770 kb on - strand, within AO356_06650at 1469.794 kb on - strand, within AO356_06650at 1469.794 kb on - strand, within AO356_06650at 1469.794 kb on - strand, within AO356_06650at 1469.877 kb on - strand, within AO356_06650at 1470.062 kb on - strand, within AO356_06650at 1470.191 kb on - strandat 1470.191 kb on - strandat 1470.191 kb on - strandat 1470.191 kb on - strandat 1470.191 kb on - strandat 1470.218 kb on - strandat 1470.218 kb on - strandat 1470.237 kb on - strandat 1470.297 kb on + strandat 1470.298 kb on - strandat 1470.625 kb on + strand, within AO356_06655at 1470.625 kb on + strand, within AO356_06655at 1470.625 kb on + strand, within AO356_06655at 1470.625 kb on + strand, within AO356_06655at 1470.625 kb on + strand, within AO356_06655at 1470.625 kb on + strand, within AO356_06655at 1470.626 kb on - strand, within AO356_06655at 1470.626 kb on - strand, within AO356_06655at 1470.626 kb on - strand, within AO356_06655at 1470.626 kb on - strand, within AO356_06655at 1470.629 kb on + strand, within AO356_06655at 1470.629 kb on + strand, within AO356_06655at 1470.629 kb on + strand, within AO356_06655at 1470.629 kb on + strand, within AO356_06655at 1470.629 kb on + strand, within AO356_06655at 1470.629 kb on + strand, within AO356_06655at 1470.630 kb on - strand, within AO356_06655at 1470.630 kb on - strand, within AO356_06655at 1470.751 kb on + strand, within AO356_06655at 1470.751 kb on + strand, within AO356_06655at 1470.751 kb on + strand, within AO356_06655at 1470.751 kb on + strand, within AO356_06655at 1470.752 kb on - strand, within AO356_06655

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Per-strain Table

Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml
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1,469,770 - AO356_06650 0.16 +2.0
1,469,794 - AO356_06650 0.21 +2.9
1,469,794 - AO356_06650 0.21 +2.8
1,469,794 - AO356_06650 0.21 +1.8
1,469,877 - AO356_06650 0.38 +3.3
1,470,062 - AO356_06650 0.75 +3.4
1,470,191 - +2.4
1,470,191 - +1.5
1,470,191 - +1.6
1,470,191 - +1.4
1,470,191 - +2.5
1,470,218 - +0.5
1,470,218 - +1.2
1,470,237 - +0.4
1,470,297 + -1.8
1,470,298 - +0.9
1,470,625 + AO356_06655 0.10 +0.5
1,470,625 + AO356_06655 0.10 -2.6
1,470,625 + AO356_06655 0.10 -0.0
1,470,625 + AO356_06655 0.10 -0.6
1,470,625 + AO356_06655 0.10 +0.9
1,470,625 + AO356_06655 0.10 +0.4
1,470,626 - AO356_06655 0.10 +0.2
1,470,626 - AO356_06655 0.10 +0.6
1,470,626 - AO356_06655 0.10 -0.9
1,470,626 - AO356_06655 0.10 +0.4
1,470,629 + AO356_06655 0.11 +1.7
1,470,629 + AO356_06655 0.11 +0.4
1,470,629 + AO356_06655 0.11 -0.1
1,470,629 + AO356_06655 0.11 +0.3
1,470,629 + AO356_06655 0.11 -0.3
1,470,629 + AO356_06655 0.11 +0.8
1,470,630 - AO356_06655 0.11 +0.0
1,470,630 - AO356_06655 0.11 -0.6
1,470,751 + AO356_06655 0.26 +0.0
1,470,751 + AO356_06655 0.26 +0.7
1,470,751 + AO356_06655 0.26 +0.6
1,470,751 + AO356_06655 0.26 +0.6
1,470,752 - AO356_06655 0.27 +0.7

Or see this region's nucleotide sequence