Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_06115 and AO356_06120 are separated by 94 nucleotides AO356_06120 and AO356_06125 are separated by 33 nucleotides AO356_06125 and AO356_06130 are separated by 136 nucleotides
AO356_06115: AO356_06115 - hypothetical protein, at 1,356,989 to 1,357,360
_06115
AO356_06120: AO356_06120 - hypothetical protein, at 1,357,455 to 1,357,850
_06120
AO356_06125: AO356_06125 - hypothetical protein, at 1,357,884 to 1,358,573
_06125
AO356_06130: AO356_06130 - multidrug transporter AcrB, at 1,358,710 to 1,361,775
_06130
Position (kb)
1357
1358
1359 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1356.918 kb on + strand at 1356.919 kb on - strand at 1356.919 kb on - strand at 1356.943 kb on + strand at 1356.944 kb on - strand at 1356.944 kb on - strand at 1356.970 kb on + strand at 1356.970 kb on + strand at 1356.970 kb on + strand at 1356.971 kb on - strand at 1356.971 kb on - strand at 1357.029 kb on - strand, within AO356_06115 at 1357.195 kb on + strand, within AO356_06115 at 1357.220 kb on + strand, within AO356_06115 at 1357.221 kb on - strand, within AO356_06115 at 1357.221 kb on - strand, within AO356_06115 at 1357.400 kb on + strand at 1357.548 kb on + strand, within AO356_06120 at 1357.549 kb on - strand, within AO356_06120 at 1357.549 kb on - strand, within AO356_06120 at 1357.549 kb on - strand, within AO356_06120 at 1357.549 kb on - strand, within AO356_06120 at 1357.549 kb on - strand, within AO356_06120 at 1357.580 kb on + strand, within AO356_06120 at 1357.580 kb on + strand, within AO356_06120 at 1357.580 kb on + strand, within AO356_06120 at 1357.581 kb on - strand, within AO356_06120 at 1357.692 kb on + strand, within AO356_06120 at 1357.692 kb on + strand, within AO356_06120 at 1357.693 kb on - strand, within AO356_06120 at 1357.693 kb on - strand, within AO356_06120 at 1357.693 kb on - strand, within AO356_06120 at 1357.693 kb on - strand, within AO356_06120 at 1357.693 kb on - strand, within AO356_06120 at 1357.725 kb on + strand, within AO356_06120 at 1357.895 kb on + strand at 1358.292 kb on + strand, within AO356_06125 at 1358.292 kb on + strand, within AO356_06125 at 1358.292 kb on + strand, within AO356_06125 at 1358.292 kb on + strand, within AO356_06125 at 1358.383 kb on - strand, within AO356_06125 at 1358.383 kb on - strand, within AO356_06125 at 1358.383 kb on - strand, within AO356_06125 at 1358.383 kb on - strand, within AO356_06125 at 1358.451 kb on + strand, within AO356_06125 at 1358.451 kb on + strand, within AO356_06125 at 1358.451 kb on + strand, within AO356_06125 at 1358.452 kb on - strand, within AO356_06125 at 1358.452 kb on - strand, within AO356_06125 at 1358.452 kb on - strand, within AO356_06125 at 1358.452 kb on - strand, within AO356_06125 at 1358.452 kb on - strand, within AO356_06125 at 1358.741 kb on + strand at 1358.741 kb on + strand at 1358.741 kb on + strand at 1358.742 kb on - strand at 1358.742 kb on - strand at 1358.742 kb on - strand at 1358.742 kb on - strand at 1358.742 kb on - strand at 1358.742 kb on - strand at 1358.979 kb on + strand at 1358.980 kb on - strand at 1358.980 kb on - strand at 1358.980 kb on - strand at 1358.980 kb on - strand at 1359.237 kb on - strand, within AO356_06130 at 1359.318 kb on - strand, within AO356_06130 at 1359.318 kb on - strand, within AO356_06130 at 1359.321 kb on + strand, within AO356_06130 at 1359.322 kb on - strand, within AO356_06130 at 1359.322 kb on - strand, within AO356_06130 at 1359.322 kb on - strand, within AO356_06130 at 1359.322 kb on - strand, within AO356_06130 at 1359.322 kb on - strand, within AO356_06130 at 1359.387 kb on - strand, within AO356_06130 at 1359.387 kb on - strand, within AO356_06130 at 1359.487 kb on - strand, within AO356_06130
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,356,918 + +0.9 1,356,919 - -0.3 1,356,919 - +0.4 1,356,943 + +0.5 1,356,944 - +0.2 1,356,944 - -0.6 1,356,970 + +0.5 1,356,970 + -0.6 1,356,970 + -0.2 1,356,971 - -0.5 1,356,971 - -0.8 1,357,029 - AO356_06115 0.11 -0.4 1,357,195 + AO356_06115 0.55 -1.1 1,357,220 + AO356_06115 0.62 -0.1 1,357,221 - AO356_06115 0.62 +0.4 1,357,221 - AO356_06115 0.62 -1.7 1,357,400 + +0.8 1,357,548 + AO356_06120 0.23 -1.9 1,357,549 - AO356_06120 0.24 -0.7 1,357,549 - AO356_06120 0.24 -0.3 1,357,549 - AO356_06120 0.24 -0.1 1,357,549 - AO356_06120 0.24 +0.1 1,357,549 - AO356_06120 0.24 +1.5 1,357,580 + AO356_06120 0.32 +0.1 1,357,580 + AO356_06120 0.32 +0.4 1,357,580 + AO356_06120 0.32 +0.7 1,357,581 - AO356_06120 0.32 -0.2 1,357,692 + AO356_06120 0.60 +0.4 1,357,692 + AO356_06120 0.60 +1.0 1,357,693 - AO356_06120 0.60 +1.4 1,357,693 - AO356_06120 0.60 +0.5 1,357,693 - AO356_06120 0.60 +0.3 1,357,693 - AO356_06120 0.60 +1.8 1,357,693 - AO356_06120 0.60 -0.8 1,357,725 + AO356_06120 0.68 +0.3 1,357,895 + +0.1 1,358,292 + AO356_06125 0.59 -0.5 1,358,292 + AO356_06125 0.59 -0.4 1,358,292 + AO356_06125 0.59 -0.3 1,358,292 + AO356_06125 0.59 -0.2 1,358,383 - AO356_06125 0.72 +0.2 1,358,383 - AO356_06125 0.72 +0.3 1,358,383 - AO356_06125 0.72 +0.2 1,358,383 - AO356_06125 0.72 -0.8 1,358,451 + AO356_06125 0.82 -0.1 1,358,451 + AO356_06125 0.82 +0.2 1,358,451 + AO356_06125 0.82 -0.2 1,358,452 - AO356_06125 0.82 -0.2 1,358,452 - AO356_06125 0.82 -0.1 1,358,452 - AO356_06125 0.82 -0.0 1,358,452 - AO356_06125 0.82 +1.1 1,358,452 - AO356_06125 0.82 +0.3 1,358,741 + +0.3 1,358,741 + +1.2 1,358,741 + +0.4 1,358,742 - +0.7 1,358,742 - +0.9 1,358,742 - +0.1 1,358,742 - -0.6 1,358,742 - -0.3 1,358,742 - -0.6 1,358,979 + -1.1 1,358,980 - -1.1 1,358,980 - -0.5 1,358,980 - -0.5 1,358,980 - -0.6 1,359,237 - AO356_06130 0.17 -0.3 1,359,318 - AO356_06130 0.20 -0.4 1,359,318 - AO356_06130 0.20 -0.3 1,359,321 + AO356_06130 0.20 -0.1 1,359,322 - AO356_06130 0.20 +0.4 1,359,322 - AO356_06130 0.20 +0.3 1,359,322 - AO356_06130 0.20 +0.3 1,359,322 - AO356_06130 0.20 +0.2 1,359,322 - AO356_06130 0.20 +0.1 1,359,387 - AO356_06130 0.22 +0.5 1,359,387 - AO356_06130 0.22 +0.6 1,359,487 - AO356_06130 0.25 -0.0
Or see this region's nucleotide sequence