Experiment: Thallium(I) acetate 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AO356_05865 and AO356_05870 are separated by 536 nucleotides AO356_05870 and AO356_05875 are separated by 702 nucleotides
AO356_05865: AO356_05865 - transcriptional regulator, at 1,298,651 to 1,299,385
_05865
AO356_05870: AO356_05870 - hypothetical protein, at 1,299,922 to 1,300,263
_05870
AO356_05875: AO356_05875 - DNA mismatch repair protein MutS, at 1,300,966 to 1,303,545
_05875
Position (kb)
1299
1300
1301 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1299.436 kb on - strand at 1299.440 kb on - strand at 1299.566 kb on + strand at 1299.621 kb on + strand at 1299.621 kb on + strand at 1299.621 kb on + strand at 1299.622 kb on - strand at 1299.643 kb on + strand at 1299.643 kb on + strand at 1299.644 kb on - strand at 1299.729 kb on - strand at 1299.773 kb on + strand at 1299.773 kb on + strand at 1299.774 kb on - strand at 1299.774 kb on - strand at 1299.774 kb on - strand at 1299.774 kb on - strand at 1299.774 kb on - strand at 1299.780 kb on - strand at 1299.780 kb on - strand at 1299.780 kb on - strand at 1299.797 kb on + strand at 1299.797 kb on + strand at 1299.797 kb on + strand at 1299.798 kb on - strand at 1299.798 kb on - strand at 1299.798 kb on - strand at 1299.798 kb on - strand at 1299.851 kb on + strand at 1299.860 kb on + strand at 1299.918 kb on + strand at 1299.918 kb on + strand at 1299.918 kb on + strand at 1299.918 kb on + strand at 1299.918 kb on + strand at 1299.918 kb on + strand at 1299.918 kb on + strand at 1299.918 kb on + strand at 1299.919 kb on - strand at 1299.919 kb on - strand at 1299.919 kb on - strand at 1299.919 kb on - strand at 1299.919 kb on - strand at 1300.009 kb on + strand, within AO356_05870 at 1300.009 kb on + strand, within AO356_05870 at 1300.009 kb on + strand, within AO356_05870 at 1300.009 kb on + strand, within AO356_05870 at 1300.009 kb on + strand, within AO356_05870 at 1300.010 kb on - strand, within AO356_05870 at 1300.010 kb on - strand, within AO356_05870 at 1300.012 kb on + strand, within AO356_05870 at 1300.012 kb on + strand, within AO356_05870 at 1300.012 kb on + strand, within AO356_05870 at 1300.013 kb on - strand, within AO356_05870 at 1300.013 kb on - strand, within AO356_05870 at 1300.013 kb on - strand, within AO356_05870 at 1300.013 kb on - strand, within AO356_05870 at 1300.013 kb on - strand, within AO356_05870 at 1300.013 kb on - strand, within AO356_05870 at 1300.183 kb on - strand, within AO356_05870 at 1300.183 kb on - strand, within AO356_05870 at 1300.262 kb on - strand at 1300.262 kb on - strand at 1300.285 kb on + strand at 1300.286 kb on - strand at 1300.343 kb on + strand at 1300.344 kb on - strand at 1300.344 kb on - strand at 1300.393 kb on + strand at 1300.393 kb on + strand at 1300.394 kb on - strand at 1300.394 kb on - strand at 1300.814 kb on + strand at 1300.814 kb on + strand at 1300.814 kb on + strand at 1300.814 kb on + strand at 1300.841 kb on - strand at 1300.841 kb on - strand at 1300.842 kb on + strand at 1300.842 kb on + strand at 1300.842 kb on + strand at 1300.842 kb on + strand at 1300.842 kb on + strand at 1300.842 kb on + strand at 1300.842 kb on + strand at 1300.842 kb on + strand at 1300.843 kb on - strand at 1300.843 kb on - strand at 1300.843 kb on - strand at 1300.843 kb on - strand at 1300.843 kb on - strand at 1300.843 kb on - strand at 1300.843 kb on - strand at 1300.843 kb on - strand at 1300.885 kb on + strand at 1300.886 kb on - strand at 1300.971 kb on + strand at 1300.971 kb on + strand at 1300.972 kb on - strand at 1300.972 kb on - strand at 1300.972 kb on - strand at 1300.972 kb on - strand at 1301.018 kb on - strand at 1301.018 kb on - strand at 1301.059 kb on + strand at 1301.059 kb on + strand at 1301.077 kb on + strand at 1301.078 kb on - strand at 1301.078 kb on - strand at 1301.078 kb on - strand at 1301.089 kb on + strand at 1301.090 kb on - strand at 1301.090 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Thallium(I) acetate 0.008 mg/ml remove 1,299,436 - -1.0 1,299,440 - +0.3 1,299,566 + -0.2 1,299,621 + +0.3 1,299,621 + -2.6 1,299,621 + +1.1 1,299,622 - +1.1 1,299,643 + +1.1 1,299,643 + +0.9 1,299,644 - -0.7 1,299,729 - +0.3 1,299,773 + +0.3 1,299,773 + -0.0 1,299,774 - -0.3 1,299,774 - -0.2 1,299,774 - -0.5 1,299,774 - -0.0 1,299,774 - -0.8 1,299,780 - +0.3 1,299,780 - -0.5 1,299,780 - -1.2 1,299,797 + +1.0 1,299,797 + +0.8 1,299,797 + +0.3 1,299,798 - +0.2 1,299,798 - -0.2 1,299,798 - +0.2 1,299,798 - +0.3 1,299,851 + -0.3 1,299,860 + +1.3 1,299,918 + -0.7 1,299,918 + -1.2 1,299,918 + -0.4 1,299,918 + -0.7 1,299,918 + +0.3 1,299,918 + +0.2 1,299,918 + +0.5 1,299,918 + -0.2 1,299,919 - -0.8 1,299,919 - -0.7 1,299,919 - -0.5 1,299,919 - +1.0 1,299,919 - +0.2 1,300,009 + AO356_05870 0.25 -1.4 1,300,009 + AO356_05870 0.25 +0.0 1,300,009 + AO356_05870 0.25 -0.5 1,300,009 + AO356_05870 0.25 +0.3 1,300,009 + AO356_05870 0.25 -0.4 1,300,010 - AO356_05870 0.26 +0.7 1,300,010 - AO356_05870 0.26 +0.8 1,300,012 + AO356_05870 0.26 -0.5 1,300,012 + AO356_05870 0.26 +1.8 1,300,012 + AO356_05870 0.26 +1.3 1,300,013 - AO356_05870 0.27 +0.7 1,300,013 - AO356_05870 0.27 +0.7 1,300,013 - AO356_05870 0.27 +0.6 1,300,013 - AO356_05870 0.27 +0.9 1,300,013 - AO356_05870 0.27 -1.1 1,300,013 - AO356_05870 0.27 -0.7 1,300,183 - AO356_05870 0.76 +0.0 1,300,183 - AO356_05870 0.76 -0.1 1,300,262 - +0.5 1,300,262 - +0.6 1,300,285 + +0.3 1,300,286 - -0.7 1,300,343 + -0.7 1,300,344 - -0.4 1,300,344 - -2.8 1,300,393 + -0.5 1,300,393 + +0.2 1,300,394 - +0.5 1,300,394 - -0.7 1,300,814 + +0.5 1,300,814 + -1.7 1,300,814 + -0.4 1,300,814 + -0.1 1,300,841 - +0.3 1,300,841 - +0.5 1,300,842 + -1.5 1,300,842 + -0.3 1,300,842 + +0.9 1,300,842 + +1.0 1,300,842 + -0.5 1,300,842 + -0.0 1,300,842 + +0.7 1,300,842 + -0.2 1,300,843 - +0.6 1,300,843 - -0.1 1,300,843 - +0.5 1,300,843 - +0.0 1,300,843 - -0.2 1,300,843 - +0.7 1,300,843 - +0.5 1,300,843 - -0.6 1,300,885 + -1.5 1,300,886 - +0.7 1,300,971 + +0.2 1,300,971 + -0.2 1,300,972 - -1.0 1,300,972 - +0.2 1,300,972 - -2.1 1,300,972 - -0.5 1,301,018 - -0.4 1,301,018 - +0.1 1,301,059 + +0.3 1,301,059 + -0.9 1,301,077 + -0.4 1,301,078 - +0.7 1,301,078 - -0.1 1,301,078 - -0.7 1,301,089 + +1.0 1,301,090 - +0.6 1,301,090 - -0.1
Or see this region's nucleotide sequence